Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 1.8e-185 652.5 338 100.0
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 2.2e-167 592.4 387 82.9
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 6.1e-130 468.0 437 62.7
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 1.8e-121 439.9 240 95.4
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 4.9e-119 431.8 412 61.4
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 3.5e-117 425.6 412 60.9
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 3.3e-115 419.1 440 57.0
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 7.3e-115 417.9 440 57.5
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 9.5e-115 417.5 440 56.8
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 9.5e-115 417.5 412 59.7
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 2.3e-113 412.9 418 58.4
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 1.2e-112 410.6 412 58.5
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 1.2e-112 410.6 412 58.3
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 6.4e-111 404.8 413 57.6
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 1.1e-110 404.1 399 57.6
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 1.4e-110 403.7 429 57.6
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 4.4e-96 355.5 412 52.4
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 9.9e-88 327.8 310 56.8
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 3.9e-84 315.8 314 54.1
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 8.7e-84 314.7 320 53.8
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 1.1e-83 314.3 251 64.5
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 1.5e-83 313.9 318 52.8
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 2.5e-83 313.2 336 55.7
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 5.6e-83 312.0 306 54.2
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 3.6e-82 309.3 310 53.2
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 8.1e-82 308.1 314 52.9
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 1.1e-81 307.8 314 52.9
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 1.1e-81 307.8 316 52.2
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 1.4e-81 307.4 314 53.8
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 1.4e-81 307.4 310 53.5
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.0e-81 305.8 314 52.9
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 5.3e-81 305.4 306 53.6
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 6.9e-81 305.1 314 53.5
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 6.9e-81 305.1 314 53.5
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 5.8e-80 302.0 309 53.1
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 7.6e-80 301.6 307 53.1
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 9.9e-80 301.2 317 49.8
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 2.9e-79 299.7 314 50.6
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 6.4e-79 298.5 320 50.9
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 1.4e-78 297.4 307 52.8
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 1.9e-78 297.0 314 52.2
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 2.4e-78 296.6 310 52.9
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 4.2e-78 295.8 310 52.9
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 5.4e-78 295.4 317 51.4
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 5.4e-78 295.4 306 51.3
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 5.4e-78 295.4 306 52.0
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 9.3e-78 294.7 309 50.8
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 2.1e-77 293.5 307 52.1
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 2.1e-77 293.5 314 50.6
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 3.5e-77 292.7 314 50.6
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 3.5e-77 292.7 310 50.6
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 4.6e-77 292.4 408 41.9
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 7.9e-77 291.6 309 51.5
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.0e-76 291.2 250 60.4
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.8e-76 290.4 335 50.1
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 2.3e-76 290.0 315 51.1
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 2.3e-76 290.0 310 50.0
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 2.3e-76 290.0 331 48.9
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 3.0e-76 289.7 314 49.7
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 3.0e-76 289.7 310 50.6
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 5.1e-76 288.9 311 51.8
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 6.7e-76 288.5 314 50.3
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 8.7e-76 288.1 310 50.6
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 1.1e-75 287.7 314 49.4
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 3.3e-75 286.2 315 51.1
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 4.3e-75 285.8 314 49.4
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 5.6e-75 285.4 310 50.3
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 7.4e-75 285.0 307 50.5
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 9.6e-75 284.6 310 51.3
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 3.7e-74 282.7 314 50.3
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 6.2e-74 282.0 312 49.4
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 2.4e-73 280.0 310 50.3
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 2.4e-73 280.0 294 52.4
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 6.9e-73 278.5 311 48.2
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 9.0e-73 278.1 292 49.7
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 2.0e-72 276.9 311 48.6
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 2.0e-72 276.9 367 45.0
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 5.8e-72 275.4 228 60.1
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 9.9e-72 274.6 310 50.3
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 1.3e-71 274.2 310 50.6
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 1.3e-71 274.2 311 50.5
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.7e-71 273.9 306 52.0
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 2.2e-71 273.5 313 49.8
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 2.2e-71 273.5 315 48.3
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 1.1e-70 271.2 311 49.2
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 3.2e-70 269.6 310 50.0
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 5.5e-70 268.9 314 47.8
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 7.9e-69 265.0 316 47.5
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 6.7e-68 261.9 247 54.3
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 1.1e-67 261.2 310 46.5
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 3.1e-65 253.1 363 43.0
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.0e-65 252.7 197 61.9
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 2.6e-64 250.0 315 45.4
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 4.5e-64 249.2 333 43.5
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 5.8e-64 248.8 310 44.5
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 4.2e-62 242.7 412 36.9
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 2.1e-61 240.4 310 45.5
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 2.1e-61 240.4 310 45.8
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 4.6e-61 239.2 314 44.9
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 3.9e-60 236.1 310 44.5
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 4.3e-59 232.6 224 54.0
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 1.3e-58 231.1 294 46.6
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 2.4e-57 226.9 309 46.3
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 1.2e-56 224.6 353 40.8
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 1.1e-54 218.0 284 48.9
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 2.4e-49 200.3 323 39.3
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 2.2e-47 193.7 316 38.9
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 7.2e-46 188.7 138 66.7
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 3.6e-45 186.4 181 55.2
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 3.9e-44 183.0 144 64.6
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 7.4e-43 178.7 265 41.5
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 6.9e-41 172.2 204 48.5
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 1.4e-38 164.5 318 36.2
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.1e-33 148.3 310 35.5
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 4.2e-30 136.3 274 37.2
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 3.1e-25 120.2 94 59.6
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 1.0e-20 105.1 110 60.0
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 5.2e-20 102.8 194 35.1
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 9.1e-17 92.0 140 40.7
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 2.5e-14 84.0 143 36.4
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 9.5e-14 82.0 55 70.9
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 1.6e-13 81.3 245 28.2
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 1.4e-12 78.2 58 62.1
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 5.9e-08 62.8 111 37.8
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 7.8e-08 62.4 112 38.4


User provided reference genes

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