Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p49010 Brassica napus HOM05D003896 ORTHO05D004517 1.9e-48 195.3 84 100.0
A02p31670 Brassica napus HOM05D003896 ORTHO05D004517 3.6e-47 191.0 82 100.0
BolC2t10995H Brassica oleracea HOM05D003896 ORTHO05D004517 1.3e-36 156.0 68 100.0
BraA02t08170Z Brassica rapa HOM05D003896 ORTHO05D004517 1.3e-36 156.0 68 100.0
Thhalv10001040m.g Eutrema salsugineum HOM05D003896 ORTHO05D004517 1.3e-33 146.0 67 92.5
A08p31730 Brassica napus HOM05D003896 ORTHO05D004517 3.0e-33 144.8 72 84.7
AL1G27180 Arabidopsis lyrata HOM05D003896 ORTHO05D004517 8.6e-33 143.3 69 88.4
AT1G15120 Arabidopsis thaliana HOM05D003896 ORTHO05D004517 8.6e-33 143.3 68 89.7
C08p17020 Brassica napus HOM05D003896 ORTHO05D004517 8.6e-33 143.3 71 84.5
BolC8t49327H Brassica oleracea HOM05D003896 ORTHO05D004517 8.6e-33 143.3 71 84.5
Sp1g13460 Schrenkiella parvula HOM05D003896 ORTHO05D004517 8.6e-33 143.3 69 88.4
Aa31LG1G40 Aethionema arabicum HOM05D003702 ORTHO05D004653 1.1e-32 142.9 68 89.7
BolC5t30061H Brassica oleracea HOM05D003896 ORTHO05D004517 1.5e-32 142.5 71 85.9
BcaB03g14560 Brassica carinata HOM05D003896 ORTHO05D004517 2.5e-32 141.7 69 87.0
BcaC05g25441 Brassica carinata HOM05D003896 ORTHO05D004517 2.5e-32 141.7 68 88.2
Aa31LG2G8780 Aethionema arabicum HOM05D003896 ORTHO05D004517 3.3e-32 141.4 80 78.8
CARHR015640 Cardamine hirsuta HOM05D003896 ORTHO05D004517 3.3e-32 141.4 68 88.2
Haze_10788 Corylus avellana HOM05D003896 ORTHO05D004517 3.3e-32 141.4 72 83.3
BcaC07g38769 Brassica carinata HOM05D003896 ORTHO05D004517 5.6e-32 140.6 70 84.3
BraA08t35095Z Brassica rapa HOM05D003896 ORTHO05D004517 9.5e-32 139.8 68 86.8
BolC8t52063H Brassica oleracea HOM05D003896 ORTHO05D004517 2.8e-31 138.3 69 84.1
BcaB02g06577 Brassica carinata HOM05D003896 ORTHO05D004517 3.6e-31 137.9 66 89.4
Prupe.1G560700 Prunus persica HOM05D003896 ORTHO05D004517 3.6e-31 137.9 91 70.3
BcaB03g13075 Brassica carinata HOM05D003896 ORTHO05D004517 4.7e-31 137.5 70 82.9
Carub.0001s1488 Capsella rubella HOM05D003896 ORTHO05D004517 4.7e-31 137.5 68 85.3
Potri.002G069301 Populus trichocarpa HOM05D003896 ORTHO05D004517 4.7e-31 137.5 70 81.4
THA.LOC109116537 Tarenaya hassleriana HOM05D003896 ORTHO05D004517 8.0e-31 136.7 68 85.3
ATR0772G203 Amborella trichopoda HOM05D003896 ORTHO05D004517 1.1e-30 136.3 81 74.1
PGR142G1796 Punica granatum HOM05D003896 ORTHO05D004517 1.1e-30 136.3 68 86.8
MBI13_g20498_MAGBIO Magnolia biondii HOM05D003896 ORTHO05D004517 1.4e-30 136.0 69 84.1
Actinidia00232 Actinidia chinensis HOM05D003896 ORTHO05D004517 1.8e-30 135.6 68 85.3
Actinidia38960 Actinidia chinensis HOM05D003896 ORTHO05D004517 1.8e-30 135.6 68 83.8
Aqoxy2G00844 Aquilegia oxysepala HOM05D003896 ORTHO05D004517 1.8e-30 135.6 68 83.8
Atru.chr6.939 Acer truncatum HOM05D003896 ORTHO05D004517 3.1e-30 134.8 68 82.4
Nn5g28709 Nelumbo nucifera HOM05D003896 ORTHO05D004517 4.0e-30 134.4 79 74.7
CDE04G2322 Ceratophyllum demersum HOM05D003896 ORTHO05D004517 5.2e-30 134.0 69 82.6
MBI13_g29655_MAGBIO Magnolia biondii HOM05D003896 ORTHO05D004517 5.2e-30 134.0 68 83.8
CANSAT11G1560 Cannabis sativa HOM05D003896 ORTHO05D004517 6.8e-30 133.7 68 85.3
FAN13G2961 Fragaria x ananassa HOM05D003896 ORTHO05D004517 6.8e-30 133.7 69 82.6
Medtr2g008070 Medicago truncatula HOM05D003896 ORTHO05D004517 6.8e-30 133.7 68 82.4
Potri.002G069200 Populus trichocarpa HOM05D003896 ORTHO05D004517 6.8e-30 133.7 68 83.8
Cpa.g.sc2.46 Carica papaya HOM05D003896 ORTHO05D004517 8.9e-30 133.3 69 79.7
RcHm_v2.0_Chr7g0225181 Rosa chinensis HOM05D003896 ORTHO05D004517 8.9e-30 133.3 69 81.2
CiPaw.05G040300 Carya illinoinensis HOM05D003896 ORTHO05D004517 1.2e-29 132.9 68 83.8
MELO3C019495.2 Cucumis melo HOM05D003896 ORTHO05D004517 1.5e-29 132.5 68 80.9
THA.LOC109117087 Tarenaya hassleriana HOM05D003896 ORTHO05D004517 2.0e-29 132.1 68 80.9
Sed0019459 Sechium edule HOM05D003896 ORTHO05D004517 2.6e-29 131.7 70 78.6
Sc02g0004100 Simmondsia chinensis HOM05D003896 ORTHO05D004517 2.6e-29 131.7 68 82.4
Thecc.02G044000 Theobroma cacao HOM05D003896 ORTHO05D004517 2.6e-29 131.7 68 82.4
TWI14G0008 Tripterygium wilfordii HOM05D003896 ORTHO05D004517 2.6e-29 131.7 68 80.9
arahy.Tifrunner.gnm1.ann1.D7TB4J Arachis hypogaea HOM05D003896 ORTHO05D004517 3.4e-29 131.3 69 78.3
TWI23G0468 Tripterygium wilfordii HOM05D003896 ORTHO05D004517 4.4e-29 131.0 68 79.4
Eucgr.I02701 Eucalyptus grandis HOM05D003896 ORTHO05D004517 5.8e-29 130.6 68 80.9
A06p11120 Brassica napus HOM05D003896 ORTHO05D004517 7.5e-29 130.2 61 90.2
CsaV3_3G018780 Cucumis sativus L. HOM05D003896 ORTHO05D004517 7.5e-29 130.2 68 79.4
Dinv19332 Davidia involucrata HOM05D003896 ORTHO05D004517 7.5e-29 130.2 74 75.7
Lj6g0000311 Lotus japonicus HOM05D003896 ORTHO05D004517 7.5e-29 130.2 68 82.4
Sed0011383 Sechium edule HOM05D003896 ORTHO05D004517 7.5e-29 130.2 69 78.3
Manes.02G178600 Manihot esculenta HOM05D003896 ORTHO05D004517 9.8e-29 129.8 68 80.9
Manes.18G091100 Manihot esculenta HOM05D003896 ORTHO05D004517 9.8e-29 129.8 68 79.4
Nn1g06112 Nelumbo nucifera HOM05D003896 ORTHO05D004517 9.8e-29 129.8 68 80.9
arahy.Tifrunner.gnm1.ann1.EN81KK Arachis hypogaea HOM05D003896 ORTHO05D004517 1.3e-28 129.4 68 77.9
BraA06t24292Z Brassica rapa HOM05D003896 ORTHO05D004517 1.3e-28 129.4 61 88.5
FvH4_5g30500 Fragaria vesca HOM05D003896 ORTHO05D004517 1.3e-28 129.4 68 80.9
FAN04G1676 Fragaria x ananassa HOM05D003896 ORTHO05D004517 1.3e-28 129.4 68 80.9
FAN18G4256 Fragaria x ananassa HOM05D003896 ORTHO05D004517 1.3e-28 129.4 68 80.9
Glyma.08G181800 Glycine max HOM05D003896 ORTHO05D004517 1.3e-28 129.4 68 79.4
QL11p018723 Quercus lobata HOM05D003896 ORTHO05D004517 1.3e-28 129.4 69 78.3
CARHR143640 Cardamine hirsuta HOM05D003896 ORTHO05D004517 1.7e-28 129.0 68 80.9
arahy.Tifrunner.gnm1.ann1.Q4HF2T Arachis hypogaea HOM05D003896 ORTHO05D004517 2.2e-28 128.6 82 69.5
CSS0003096 Camellia sinensis var. sinensis HOM05D003896 ORTHO05D004517 2.2e-28 128.6 68 80.9
CSS0009103 Camellia sinensis var. sinensis HOM05D003896 ORTHO05D004517 2.2e-28 128.6 68 80.9
MD08G1223400 Malus domestica HOM05D003896 ORTHO05D004517 2.2e-28 128.6 68 79.4
vmacro22914 Vaccinium macrocarpon HOM05D003896 ORTHO05D004517 2.2e-28 128.6 68 79.4
Glyma.15G050500 Glycine max HOM05D003896 ORTHO05D004517 2.9e-28 128.3 68 77.9
Psat1g218920 Pisum sativum HOM05D003896 ORTHO05D004517 3.7e-28 127.9 68 77.9
VMungo0540G0553 Vigna mungo HOM05D000025 ORTHO05D000136 3.7e-28 127.9 72 76.4
arahy.Tifrunner.gnm1.ann1.MYBE61 Arachis hypogaea HOM05D003896 ORTHO05D004517 6.4e-28 127.1 69 78.3
C05p13240 Brassica napus HOM05D003896 ORTHO05D004517 6.4e-28 127.1 62 87.1
MD05G1023300 Malus domestica HOM05D003896 ORTHO05D004517 6.4e-28 127.1 71 77.5
Dinv01060 Davidia involucrata HOM05D003896 ORTHO05D004517 8.3e-28 126.7 68 79.4
Dinv24242 Davidia involucrata HOM05D003896 ORTHO05D004517 8.3e-28 126.7 68 77.9
TAR628G1659 Trochodendron aralioides HOM05D003896 ORTHO05D004517 8.3e-28 126.7 68 77.9
EL10Ac1g01528 Beta vulgaris HOM05D003896 ORTHO05D004517 1.1e-27 126.3 69 76.8
Peaxi162Scf00067g02527 Petunia axillaris HOM05D003896 ORTHO05D004517 1.1e-27 126.3 68 77.9
Dinv05188 Davidia involucrata HOM05D003896 ORTHO05D004517 1.4e-27 125.9 68 76.5
AUR62035137 Chenopodium quinoa HOM05D003896 ORTHO05D004517 1.9e-27 125.6 69 76.8
AUR62042907 Chenopodium quinoa HOM05D003896 ORTHO05D004517 1.9e-27 125.6 69 76.8
TAR381G0439 Trochodendron aralioides HOM05D003896 ORTHO05D004517 1.9e-27 125.6 59 91.5
Nitab4.5_0000078g0350 Nicotiana tabacum HOM05D003896 ORTHO05D004517 2.4e-27 125.2 68 76.5
Nitab4.5_0004027g0040 Nicotiana tabacum HOM05D003896 ORTHO05D004517 2.4e-27 125.2 68 76.5
Phvul.006G209400 Phaseolus vulgaris HOM05D003896 ORTHO05D004517 2.4e-27 125.2 68 76.5
TPR.G19749 Trifolium pratense HOM05D003896 ORTHO05D004517 2.4e-27 125.2 80 67.5
Solyc09g150155.1 Solanum lycopersicum HOM05D003896 ORTHO05D004517 3.2e-27 124.8 70 71.4
A09p61560 Brassica napus HOM05D003896 ORTHO05D004517 4.1e-27 124.4 59 88.1
BraA09t41529Z Brassica rapa HOM05D003896 ORTHO05D004517 4.1e-27 124.4 59 88.1
FAN17G0735 Fragaria x ananassa HOM05D003896 ORTHO05D004517 4.1e-27 124.4 68 76.5
AagrBONN_evm.TU.Sc2ySwM_228.2620 Anthoceros agrestis HOM05D003896 ORTHO05D004517 5.4e-27 124.0 67 79.1
Aqoxy5G02118 Aquilegia oxysepala HOM05D003896 ORTHO05D004517 5.4e-27 124.0 67 80.6
C08p45150 Brassica napus HOM05D003896 ORTHO05D004517 5.4e-27 124.0 60 86.7
Thhalv10009667m.g Eutrema salsugineum HOM05D003896 ORTHO05D004517 5.4e-27 124.0 59 88.1
Atru.chr13.2169 Acer truncatum HOM05D003896 ORTHO05D004517 7.0e-27 123.6 68 75.0
HanXRQChr11g0337591 Helianthus annuus HOM05D003896 ORTHO05D004517 7.0e-27 123.6 70 74.3
Gohir.D01G001100 Gossypium hirsutum HOM05D003896 ORTHO05D004517 9.2e-27 123.2 68 76.5
Potri.005G190901 Populus trichocarpa HOM05D003896 ORTHO05D004517 9.2e-27 123.2 68 75.0
ECA236G2466 Erigeron canadensis HOM05D003896 ORTHO05D004517 1.2e-26 122.9 68 76.5
Sopen09g029690 Solanum pennellii HOM05D003896 ORTHO05D004517 1.2e-26 122.9 71 71.8
CiPaw.06G150500 Carya illinoinensis HOM05D003896 ORTHO05D004517 1.6e-26 122.5 68 77.9
Duzib052G0314 Durio zibethinus HOM05D003896 ORTHO05D004517 1.6e-26 122.5 68 73.5
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 1.6e-26 122.5 61 85.2
Duzib132G0061 Durio zibethinus HOM05D003896 ORTHO05D004517 2.0e-26 122.1 68 75.0
FAN03G2302 Fragaria x ananassa HOM05D003896 ORTHO05D004517 2.0e-26 122.1 68 75.0
Solyc09g074870.4 Solanum lycopersicum HOM05D003896 ORTHO05D004517 2.0e-26 122.1 68 75.0
PGSC0003DMG400011391 Solanum tuberosum HOM05D003896 ORTHO05D004517 2.0e-26 122.1 68 72.1
HanXRQChr11g0337581 Helianthus annuus HOM05D003896 ORTHO05D004517 2.7e-26 121.7 72 69.4
Os11g0162200 Oryza sativa ssp. japonica HOM05D003896 ORTHO05D004517 2.7e-26 121.7 68 73.5
FAN12G2386 Fragaria x ananassa HOM05D003896 ORTHO05D004517 3.5e-26 121.3 68 75.0
CDE04G0116 Ceratophyllum demersum HOM05D003896 ORTHO05D004517 4.6e-26 120.9 68 75.0
Sabra05G0145900 Salix brachista HOM05D003896 ORTHO05D004517 4.6e-26 120.9 68 79.4
CAN.G339.37 Capsicum annuum HOM05D003896 ORTHO05D004517 7.8e-26 120.2 68 70.6
Lsat_1_v5_gn_9_116680 Lactuca sativa HOM05D003896 ORTHO05D004517 7.8e-26 120.2 68 73.5
Oeu012724.1 Olea europaea HOM05D003896 ORTHO05D004517 7.8e-26 120.2 68 75.0
GSVIVG01034509001 Vitis vinifera HOM05D003896 ORTHO05D004517 1.0e-25 119.8 69 73.9
Ciclev10002923m.g Citrus clementina HOM05D003896 ORTHO05D004517 1.3e-25 119.4 68 72.1
Duzib248G1617 Durio zibethinus HOM05D003896 ORTHO05D004517 1.3e-25 119.4 68 72.1
FvH4_7g02900 Fragaria vesca HOM05D003896 ORTHO05D004517 1.3e-25 119.4 65 76.9
Gohir.A12G033300 Gossypium hirsutum HOM05D003896 ORTHO05D004517 1.7e-25 119.0 68 73.5
Gohir.D12G039500 Gossypium hirsutum HOM05D003896 ORTHO05D004517 1.7e-25 119.0 68 73.5
Hma1.2p1_1800F.1_g302950 Hydrangea macrophylla HOM05D003896 ORTHO05D004517 2.3e-25 118.6 68 73.5
ECA240G1941 Erigeron canadensis HOM05D003620 ORTHO05D004261 3.9e-25 117.9 67 73.1
Gohir.A01G001400 Gossypium hirsutum HOM05D003896 ORTHO05D004517 3.9e-25 117.9 68 72.1
Manes.18G073709 Manihot esculenta HOM05D003896 ORTHO05D004517 3.9e-25 117.9 68 72.1
Manes.18G090900 Manihot esculenta HOM05D003896 ORTHO05D004517 3.9e-25 117.9 68 72.1
Prupe.8G028000 Prunus persica HOM05D003896 ORTHO05D004517 5.0e-25 117.5 68 75.0
TAR625G1245 Trochodendron aralioides HOM05D003896 ORTHO05D004517 8.6e-25 116.7 60 81.7
FAN06G4594 Fragaria x ananassa HOM05D003896 ORTHO05D004517 1.1e-24 116.3 65 75.4
unitig_578.g15948 Utricularia gibba HOM05D003896 ORTHO05D004517 1.1e-24 116.3 68 73.5
TWI34G0745 Tripterygium wilfordii HOM05D003896 ORTHO05D004517 1.5e-24 115.9 68 70.6
Migut.B00649 Erythranthe guttata HOM05D003896 ORTHO05D004517 1.9e-24 115.5 68 70.6
SalBow6G5306 Salvia bowleyana HOM05D003896 ORTHO05D004517 2.5e-24 115.2 65 73.8
AT2G01090 Arabidopsis thaliana HOM05D003896 ORTHO05D004517 3.3e-24 114.8 56 85.7
FAN08G0225 Fragaria x ananassa HOM05D003896 ORTHO05D004517 7.3e-24 113.6 58 82.8
Migut.N01017 Erythranthe guttata HOM05D003896 ORTHO05D004517 9.5e-24 113.2 68 67.6
Sc26g0002640 Simmondsia chinensis HOM05D003896 ORTHO05D004517 9.5e-24 113.2 68 69.1
PSO210G7830 Papaver somniferum HOM05D003896 ORTHO05D004517 1.6e-23 112.5 68 69.1
PSO238G0030 Papaver somniferum HOM05D003896 ORTHO05D004517 1.6e-23 112.5 68 69.1
CBR_g10999 Chara braunii HOM05D003896 ORTHO05D004517 2.1e-23 112.1 65 72.3
Nitab4.5_0005474g0030 Nicotiana tabacum HOM05D003896 ORTHO05D004517 2.1e-23 112.1 60 76.7
Gorai.002G001600 Gossypium raimondii HOM05D003896 ORTHO05D004517 3.6e-23 111.3 59 79.7
FAN07G2777 Fragaria x ananassa HOM05D003896 ORTHO05D004517 4.7e-23 110.9 59 78.0
Pp3c26_10210 Physcomitrium patens HOM05D003896 ORTHO05D004517 6.2e-23 110.5 64 73.4
Pp3c26_10390 Physcomitrium patens HOM05D003896 ORTHO05D004517 6.2e-23 110.5 64 73.4
Thecc.08G150500 Theobroma cacao HOM05D003896 ORTHO05D004517 6.2e-23 110.5 68 69.1
Gorai.008G041200 Gossypium raimondii HOM05D003896 ORTHO05D004517 3.1e-22 108.2 58 77.6
Mapoly0020s0072 Marchantia polymorpha HOM05D003896 ORTHO05D004517 3.1e-22 108.2 63 69.8
CAN.G339.36 Capsicum annuum HOM05D000541 ORTHO05D000137 6.8e-22 107.1 60 73.3
Peaxi162Scf00152g01234 Petunia axillaris HOM05D003896 ORTHO05D004517 2.6e-21 105.1 97 51.5
Lsat_1_v5_gn_7_79760 Lactuca sativa HOM05D003896 ORTHO05D004517 5.8e-21 104.0 56 76.8
COL.COLO4_37834 Corchorus olitorius HOM05D004026 ORTHO05D004712 1.3e-20 102.8 65 64.6
Zm00001eb202390 Zea mays HOM05D003896 ORTHO05D004517 1.7e-20 102.4 57 71.9
Duzib116G0919 Durio zibethinus HOM05D003896 ORTHO05D004517 3.7e-20 101.3 68 63.2
CBR_g10998 Chara braunii HOM05D016306 ORTHO05D018315 1.4e-19 99.4 65 64.6
Pp3c19_20470 Physcomitrium patens HOM05D003896 ORTHO05D004517 1.9e-19 99.0 57 66.7
Nitab4.5_0013344g0010 Nicotiana tabacum HOM05D003896 ORTHO05D004517 2.4e-19 98.6 48 79.2
Gorai.013G108600 Gossypium raimondii HOM05D003896 ORTHO05D004517 4.1e-19 97.8 68 61.8
Gohir.A02G111100 Gossypium hirsutum HOM05D003896 ORTHO05D004517 5.4e-19 97.4 68 60.3
Gohir.D03G062900 Gossypium hirsutum HOM05D003896 ORTHO05D004517 1.2e-18 96.3 68 60.3
Zm00001eb139450 Zea mays HOM05D003896 ORTHO05D004517 4.6e-18 94.4 57 70.2
PRCOL_00005271 Prasinoderma coloniale HOM05D003896 ORTHO05D004517 6.0e-18 94.0 71 52.1
Thhalv10028069m.g Eutrema salsugineum HOM05D003896 ORTHO05D004517 3.0e-17 91.7 43 90.7
Thhalv10029056m.g Eutrema salsugineum HOM05D003896 ORTHO05D004517 3.0e-17 91.7 43 90.7
SMO117G0126 Selaginella moellendorffii HOM05D003896 ORTHO05D004517 6.6e-17 90.5 56 62.5
Duzib132G0328 Durio zibethinus HOM05D003896 ORTHO05D004517 1.1e-16 89.7 41 82.9
MCO16G078 Micromonas commoda HOM05D003896 ORTHO05D004517 1.9e-16 89.0 67 55.2
Atru.chr6.943 Acer truncatum HOM05D003896 ORTHO05D004517 2.5e-16 88.6 40 82.5
ClCG05G009840 Citrullus lanatus HOM05D003896 ORTHO05D004517 2.5e-16 88.6 40 82.5
PGSC0003DMG400011392 Solanum tuberosum HOM05D003896 ORTHO05D004517 1.5e-13 79.3 59 59.3
Zm00001eb181710 Zea mays HOM05D003896 ORTHO05D004517 7.1e-11 70.5 68 51.5
FAN22G1408 Fragaria x ananassa HOM05D003896 ORTHO05D004517 1.2e-10 69.7 42 71.4
unitig_8.g2965 Utricularia gibba HOM05D003896 ORTHO05D004517 1.6e-10 69.3 33 72.7
Zm00001eb243140 Zea mays HOM05D003896 ORTHO05D004517 3.5e-10 68.2 68 48.5
Os02g0541700 Oryza sativa ssp. japonica HOM05D003896 ORTHO05D004517 6.6e-09 63.9 68 47.1
COL.COLO4_17923 Corchorus olitorius HOM05D003896 ORTHO05D004517 8.7e-09 63.5 37 73.0
C02p49050 Brassica napus HOM05D003896 ORTHO05D004517 7.3e-08 60.5 27 96.3
Cfa005572 Carpinus fangiana HOM05D003896 ORTHO05D004517 1.6e-07 59.3 33 84.8


User provided reference genes

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