Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p48790 Brassica napus HOM05D003761 ORTHO05D039658 1.4e-78 296.2 144 100.0
BcaC03g16979 Brassica carinata HOM05D003761 ORTHO05D039658 4.4e-37 158.3 102 80.4
BcaC04g21612 Brassica carinata HOM05D003761 ORTHO05D004412 2.5e-16 89.4 102 46.1
C09p29870 Brassica napus HOM05D003761 ORTHO05D004412 2.5e-16 89.4 102 46.1
BolC9t55850H Brassica oleracea HOM05D003761 ORTHO05D004412 1.6e-15 86.7 63 61.9
Thhalv10001056m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 2.4e-14 82.8 63 60.3
BolC7t43669H Brassica oleracea HOM05D003761 ORTHO05D004412 4.0e-14 82.0 91 48.4
Sp2g12340 Schrenkiella parvula HOM05D003761 ORTHO05D004412 5.3e-14 81.6 62 61.3
BcaB07g30768 Brassica carinata HOM05D003761 ORTHO05D004412 6.9e-14 81.3 94 47.9
BcaC06g31357 Brassica carinata HOM05D003761 ORTHO05D004412 6.9e-14 81.3 62 62.9
A06p44900 Brassica napus HOM05D003761 ORTHO05D004412 6.9e-14 81.3 62 62.9
BraA06t27361Z Brassica rapa HOM05D003761 ORTHO05D004412 6.9e-14 81.3 62 62.9
C07p31280 Brassica napus HOM05D003761 ORTHO05D004412 2.0e-13 79.7 63 60.3
A09p23140 Brassica napus HOM05D003761 ORTHO05D004412 2.6e-13 79.3 95 46.3
BraA09t37917Z Brassica rapa HOM05D003761 ORTHO05D004412 2.6e-13 79.3 95 46.3
Carub.0008s0015 Capsella rubella HOM05D003761 ORTHO05D004412 3.8e-12 75.5 101 39.6
Carub.0004s2229 Capsella rubella HOM05D003761 ORTHO05D004412 1.1e-11 73.9 94 48.9
AT2G40113 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 3.2e-11 72.4 94 46.8
CARHR173680 Cardamine hirsuta HOM05D003761 ORTHO05D004412 7.1e-11 71.2 101 39.6
AL4G37770 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 9.3e-11 70.9 94 44.7
AT5G47635 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 2.7e-10 69.3 62 54.8
Aa31LG9G5380 Aethionema arabicum HOM05D003761 ORTHO05D004412 3.5e-10 68.9 61 55.7
Thhalv10017342m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 3.5e-10 68.9 89 47.2
AL8G10320 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 4.6e-10 68.6 104 39.4
BcaB06g29129 Brassica carinata HOM05D003761 ORTHO05D004412 7.9e-10 67.8 89 46.1
BolC4t28284H Brassica oleracea HOM05D003761 ORTHO05D004412 7.9e-10 67.8 106 41.5
CARHR135090 Cardamine hirsuta HOM05D003761 ORTHO05D004412 7.9e-10 67.8 94 43.6
Sp4g22430 Schrenkiella parvula HOM05D003761 ORTHO05D004412 1.3e-09 67.0 89 47.2
BcaB02g09050 Brassica carinata HOM05D003761 ORTHO05D004412 1.8e-09 66.6 89 48.3
BolC4t22355H Brassica oleracea HOM05D003761 ORTHO05D004412 1.8e-09 66.6 89 48.3
BraA05t19604Z Brassica rapa HOM05D003761 ORTHO05D004412 2.3e-09 66.2 89 47.2
A04p30050 Brassica napus HOM05D003761 ORTHO05D004412 3.0e-09 65.9 106 40.6
A05p06360 Brassica napus HOM05D003761 ORTHO05D004412 3.0e-09 65.9 106 41.5
BcaB02g09051 Brassica carinata HOM05D003761 ORTHO05D004412 3.9e-09 65.5 89 47.2
BcaC02g07354 Brassica carinata HOM05D003761 ORTHO05D004412 3.9e-09 65.5 106 39.6
BraA04t18501Z Brassica rapa HOM05D003761 ORTHO05D004412 6.7e-09 64.7 106 39.6
THA.LOC104806736 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 6.7e-09 64.7 61 52.5
BraA01t01941Z Brassica rapa HOM05D003761 ORTHO05D004412 4.3e-08 62.0 95 41.1
BcaC09g50449 Brassica carinata HOM05D003761 ORTHO05D004412 7.4e-08 61.2 94 39.4
C01p25300 Brassica napus HOM05D003761 ORTHO05D004412 7.4e-08 61.2 94 39.4
BolC1t02480H Brassica oleracea HOM05D003761 ORTHO05D004412 7.4e-08 61.2 94 39.4
AT4G17215 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 9.6e-08 60.8 60 45.0
BcaC06g34236 Brassica carinata HOM05D003761 ORTHO05D004412 9.6e-08 60.8 94 37.2
Aa31LG5G19480 Aethionema arabicum HOM05D003761 ORTHO05D004412 1.3e-07 60.5 102 38.2
Thhalv10026465m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 2.1e-07 59.7 63 44.4
Sp7g16980 Schrenkiella parvula HOM05D003761 ORTHO05D004412 2.1e-07 59.7 94 37.2
BcaC06g33549 Brassica carinata HOM05D003761 ORTHO05D004412 2.8e-07 59.3 96 38.5
A03p50350 Brassica napus HOM05D003761 ORTHO05D004412 2.8e-07 59.3 96 38.5
C07p48660 Brassica napus HOM05D003761 ORTHO05D004412 2.8e-07 59.3 96 38.5
BolC7t45373H Brassica oleracea HOM05D003761 ORTHO05D004412 2.8e-07 59.3 96 38.5
BraA03t14124Z Brassica rapa HOM05D003761 ORTHO05D004412 2.8e-07 59.3 96 38.5
BcaNung00112 Brassica carinata HOM05D003761 ORTHO05D004412 8.1e-07 57.8 94 37.2
BcaNung03472 Brassica carinata HOM05D003761 ORTHO05D004412 8.1e-07 57.8 94 37.2
AL7G37500 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 1.4e-06 57.0 100 32.0
Carub.0007s2420 Capsella rubella HOM05D003761 ORTHO05D004412 1.8e-06 56.6 100 33.0
CARHR223820 Cardamine hirsuta HOM05D003761 ORTHO05D004412 2.4e-06 56.2 100 31.0


User provided reference genes

Program Settings