Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p48120 Brassica napus HOM05D008086 ORTHO05D041227 3.2e-68 261.5 126 100.0
BolC2t10844H Brassica oleracea HOM05D008086 ORTHO05D041227 6.4e-56 220.7 104 100.0
BcaC03g16910 Brassica carinata HOM05D008086 ORTHO05D004972 4.7e-51 204.5 96 100.0
A02p30570 Brassica napus HOM05D008086 ORTHO05D004972 8.9e-42 173.7 104 80.8
BraA02t08074Z Brassica rapa HOM05D008086 ORTHO05D004972 8.9e-42 173.7 104 80.8
C02p51250 Brassica napus HOM05D008086 ORTHO05D004972 2.6e-33 145.6 75 85.3
BraA02t08035Z Brassica rapa HOM05D008086 ORTHO05D004972 2.6e-33 145.6 75 88.0
C03p62430 Brassica napus HOM05D008086 ORTHO05D004972 3.4e-33 145.2 78 83.3
BolC3t18501H Brassica oleracea HOM05D008086 ORTHO05D004972 3.4e-33 145.2 78 83.3
BcaB07g30809 Brassica carinata HOM05D008086 ORTHO05D004972 7.6e-33 144.1 81 82.7
BcaC03g17198 Brassica carinata HOM05D008086 ORTHO05D004972 1.7e-32 142.9 75 84.0
BolC2t11215H Brassica oleracea HOM05D008086 ORTHO05D004972 1.7e-32 142.9 75 84.0
BraA02t08071Z Brassica rapa HOM05D008086 ORTHO05D004972 1.7e-32 142.9 75 82.7
BcaC03g16869 Brassica carinata HOM05D008086 ORTHO05D004972 6.4e-32 141.0 134 55.2
C02p47660 Brassica napus HOM05D008086 ORTHO05D004972 1.9e-31 139.4 75 82.7
BolC2t10802H Brassica oleracea HOM05D008086 ORTHO05D004972 1.9e-31 139.4 75 82.7
BcaC06g34302 Brassica carinata HOM05D008086 ORTHO05D004972 3.5e-30 135.2 80 75.0
C07p30570 Brassica napus HOM05D008086 ORTHO05D004972 3.5e-30 135.2 80 75.0
BcaC06g31340 Brassica carinata HOM05D008086 ORTHO05D004972 1.0e-29 133.7 75 77.3
BcaC06g31429 Brassica carinata HOM05D008086 ORTHO05D004972 2.3e-29 132.5 72 79.2
BcaC04g19776 Brassica carinata HOM05D008086 ORTHO05D004972 3.9e-29 131.7 75 74.7
C09p51830 Brassica napus HOM05D008086 ORTHO05D004972 3.9e-29 131.7 75 74.7
A01p41900 Brassica napus HOM05D008086 ORTHO05D004972 8.6e-29 130.6 75 74.7
BolC1t05406H Brassica oleracea HOM05D008086 ORTHO05D004972 5.6e-28 127.9 75 73.3
BolC9t58045H Brassica oleracea HOM05D008086 ORTHO05D004972 3.1e-26 122.1 69 73.9
A06p45430 Brassica napus HOM05D008086 ORTHO05D004972 7.6e-25 117.5 80 66.2
BraA06t27411Z Brassica rapa HOM05D008086 ORTHO05D004972 7.6e-25 117.5 80 66.2
BcaC06g34304 Brassica carinata HOM05D008086 ORTHO05D004972 1.3e-24 116.7 75 69.3
AL8G10360 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 5.8e-17 91.3 99 49.5
Carub.0008s0020 Capsella rubella HOM05D008086 ORTHO05D004972 5.4e-15 84.7 75 57.3
BcaC03g16909 Brassica carinata HOM05D008086 ORTHO05D004972 1.2e-14 83.6 42 85.7
A02p30530 Brassica napus HOM05D008086 ORTHO05D004972 1.2e-14 83.6 98 49.0
C02p48110 Brassica napus HOM05D008086 ORTHO05D004972 1.2e-14 83.6 42 85.7
BolC2t10843H Brassica oleracea HOM05D008086 ORTHO05D004972 1.2e-14 83.6 42 85.7
BcaC06g31366 Brassica carinata HOM05D008086 ORTHO05D004972 7.9e-14 80.9 76 51.3
A10p16630 Brassica napus HOM05D008086 ORTHO05D004972 2.3e-13 79.3 39 82.1
CARHR173730 Cardamine hirsuta HOM05D008086 ORTHO05D004972 3.0e-13 79.0 75 49.3
A06p44950 Brassica napus HOM05D008086 ORTHO05D004972 3.9e-13 78.6 82 48.8
BraA06t27366Z Brassica rapa HOM05D008086 ORTHO05D004972 3.9e-13 78.6 82 48.8
CARHR173760 Cardamine hirsuta HOM05D008086 ORTHO05D004972 4.3e-12 75.1 72 47.2
BcaC09g48101 Brassica carinata HOM05D003507 ORTHO05D004324 5.6e-12 74.7 39 76.9
C07p31230 Brassica napus HOM05D008086 ORTHO05D004972 5.6e-12 74.7 83 48.2
BolC7t43664H Brassica oleracea HOM05D008086 ORTHO05D004972 5.6e-12 74.7 83 48.2
AL8G10380 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 3.6e-11 72.0 74 48.6
A02p30540 Brassica napus HOM05D008086 ORTHO05D004972 8.1e-11 70.9 31 96.8
BraA02t08072Z Brassica rapa HOM05D008086 ORTHO05D004972 2.4e-10 69.3 30 96.7
C07p31290 Brassica napus HOM05D008086 ORTHO05D004972 6.9e-10 67.8 81 45.7
BcaC06g34235 Brassica carinata HOM05D008086 ORTHO05D004972 2.0e-09 66.2 71 46.5
BcaC06g34237 Brassica carinata HOM05D008086 ORTHO05D004972 2.0e-09 66.2 71 46.5
BcaC06g31364 Brassica carinata HOM05D008086 ORTHO05D004972 4.5e-09 65.1 71 45.1
C07p31250 Brassica napus HOM05D008086 ORTHO05D004972 4.5e-09 65.1 72 48.6
BolC7t43666H Brassica oleracea HOM05D008086 ORTHO05D004972 4.5e-09 65.1 72 48.6
CARHR173740 Cardamine hirsuta HOM05D008086 ORTHO05D004972 2.9e-08 62.4 72 44.4
C07p32950 Brassica napus HOM05D008086 ORTHO05D004972 1.9e-07 59.7 35 74.3
Thhalv10001213m.g Eutrema salsugineum HOM05D008086 ORTHO05D004972 1.9e-07 59.7 39 64.1
Aa31LG9G5430 Aethionema arabicum HOM05D008086 ORTHO05D004972 4.2e-07 58.5 58 41.4
A06p44930 Brassica napus HOM05D008086 ORTHO05D004972 5.5e-07 58.2 73 46.6
BraA06t27364Z Brassica rapa HOM05D008086 ORTHO05D004972 5.5e-07 58.2 73 46.6
BcaC06g31356 Brassica carinata HOM05D008086 ORTHO05D004972 9.3e-07 57.4 81 38.3
CARHR174690 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.6e-06 56.6 79 34.2
BcaNung07056 Brassica carinata HOM05D008086 ORTHO05D004972 2.7e-06 55.8 44 56.8
CARHR183270 Cardamine hirsuta HOM05D008086 ORTHO05D004972 7.9e-06 54.3 67 38.8


User provided reference genes

Program Settings