Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p47550 Brassica napus HOM05D001014 ORTHO05D000896 9.5e-65 250.0 122 100.0
BolC9t57488H Brassica oleracea HOM05D001014 ORTHO05D027777 2.8e-40 168.7 98 90.8
BcaC03g16861 Brassica carinata HOM05D001014 ORTHO05D027777 2.0e-38 162.5 81 96.3
C09p46240 Brassica napus HOM05D001014 ORTHO05D000896 3.7e-37 158.3 84 94.0
C01p39930 Brassica napus HOM05D001014 ORTHO05D000896 2.1e-32 142.5 88 79.5
BolC1t04802H Brassica oleracea HOM05D001014 ORTHO05D027777 8.9e-31 137.1 93 72.0
A09p21990 Brassica napus HOM05D001014 ORTHO05D027777 5.4e-28 127.9 94 70.2
BolC1t03948H Brassica oleracea HOM05D001014 ORTHO05D000896 5.4e-28 127.9 86 72.1
AL3G31540 Arabidopsis lyrata HOM05D001014 ORTHO05D000896 7.6e-22 107.5 107 58.9
BraA01t03259Z Brassica rapa HOM05D001014 ORTHO05D000896 1.7e-21 106.3 78 67.9
BraA01t03681Z Brassica rapa HOM05D001014 ORTHO05D000896 1.7e-21 106.3 82 70.7
A01p31340 Brassica napus HOM05D001014 ORTHO05D000896 4.9e-21 104.8 78 66.7
A01p36000 Brassica napus HOM05D001014 ORTHO05D000896 1.4e-20 103.2 82 69.5
Sp3g16430 Schrenkiella parvula HOM05D001014 ORTHO05D000896 5.4e-20 101.3 93 63.4
Thhalv10021480m.g Eutrema salsugineum HOM05D001014 ORTHO05D000896 9.3e-20 100.5 97 62.9
BcaC09g48791 Brassica carinata HOM05D001014 ORTHO05D000896 7.9e-19 97.4 80 68.8
BcaC09g48792 Brassica carinata HOM05D001014 ORTHO05D000896 7.9e-19 97.4 80 68.8
C01p45870 Brassica napus HOM05D001014 ORTHO05D000896 7.9e-19 97.4 80 68.8
AT3G18295 Arabidopsis thaliana HOM05D001014 ORTHO05D000896 1.0e-18 97.1 105 55.2
Aa31LG8G5160 Aethionema arabicum HOM05D001014 ORTHO05D000896 1.9e-17 92.8 96 55.2
CARHR093660 Cardamine hirsuta HOM05D001014 ORTHO05D000896 3.3e-17 92.0 96 55.2
BraA05t21973Z Brassica rapa HOM05D001014 ORTHO05D000896 5.6e-17 91.3 95 58.9
BcaB04g20776 Brassica carinata HOM05D001014 ORTHO05D000896 2.8e-16 89.0 64 75.0
A05p31350 Brassica napus HOM05D001014 ORTHO05D000896 4.0e-15 85.1 100 56.0
BolC5t33473H Brassica oleracea HOM05D001683 ORTHO05D001627 2.6e-14 82.4 103 53.4
C05p47650 Brassica napus HOM05D001014 ORTHO05D000896 4.5e-14 81.6 92 56.5
BolC3t17238H Brassica oleracea HOM05D001683 ORTHO05D001627 5.8e-14 81.3 83 60.2
Carub.0003s1808 Capsella rubella HOM05D001014 ORTHO05D000896 7.6e-14 80.9 105 51.4
BcaC01g03702 Brassica carinata HOM05D001683 ORTHO05D001627 2.2e-13 79.3 84 60.7
C03p49410 Brassica napus HOM05D001683 ORTHO05D001627 2.2e-13 79.3 84 60.7
BolC6t35478H Brassica oleracea HOM05D001683 ORTHO05D001627 4.2e-12 75.1 91 49.5
THA.LOC104820388 Tarenaya hassleriana HOM05D001014 ORTHO05D000896 5.4e-12 74.7 98 51.0
A03p40610 Brassica napus HOM05D001683 ORTHO05D001627 9.3e-12 73.9 79 55.7
BraA03t13218Z Brassica rapa HOM05D001014 ORTHO05D000896 9.3e-12 73.9 79 55.7
Carub.0001s3792 Capsella rubella HOM05D001014 ORTHO05D000896 9.3e-12 73.9 79 51.9
BraA06t23626Z Brassica rapa HOM05D001014 ORTHO05D000896 7.9e-11 70.9 70 60.0
BcaC08g43078 Brassica carinata HOM05D001014 ORTHO05D000896 1.8e-10 69.7 70 55.7
C06p03370 Brassica napus HOM05D001014 ORTHO05D000896 1.8e-10 69.7 70 55.7
CARHR038740 Cardamine hirsuta HOM05D001014 ORTHO05D000896 2.3e-10 69.3 98 48.0
BcaB07g33719 Brassica carinata HOM05D001014 ORTHO05D000896 3.9e-10 68.6 70 58.6
A06p04210 Brassica napus HOM05D001014 ORTHO05D000896 3.9e-10 68.6 70 58.6
Aa31LG10G4790 Aethionema arabicum HOM05D001683 ORTHO05D001627 6.7e-10 67.8 90 48.9
AT1G48770 Arabidopsis thaliana HOM05D001014 ORTHO05D000896 8.7e-10 67.4 85 45.9
AL1G55490 Arabidopsis lyrata HOM05D001014 ORTHO05D000896 2.5e-09 65.9 78 50.0
C08p04740 Brassica napus HOM05D001014 ORTHO05D000896 5.6e-09 64.7 69 52.2
BolC8t47274H Brassica oleracea HOM05D001014 ORTHO05D000896 5.6e-09 64.7 69 52.2
BcaB08g35194 Brassica carinata HOM05D001014 ORTHO05D092002 9.6e-09 63.9 33 87.9
Sp1g35690 Schrenkiella parvula HOM05D001014 ORTHO05D000896 1.4e-07 60.1 73 56.2
Lalb_Chr14g0371061 Lupinus albus HOM05D001014 ORTHO05D000896 6.9e-07 57.8 93 40.9
BcaC07g37104 Brassica carinata HOM05D001014 ORTHO05D000896 2.0e-06 56.2 69 46.4
BraA03t11945Z Brassica rapa HOM05D001014 ORTHO05D000896 2.6e-06 55.8 77 48.1
Sed0024398 Sechium edule HOM05D001014 ORTHO05D000896 2.6e-06 55.8 103 34.0
Cpa.g.sc3.489 Carica papaya HOM05D001014 ORTHO05D000896 4.5e-06 55.1 74 45.9


User provided reference genes

Program Settings