Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p47500 Brassica napus HOM05D009238 ORTHO05D019868 3.5e-121 438.3 226 100.0
BcaC03g16856 Brassica carinata HOM05D009238 ORTHO05D019868 5.1e-80 301.6 305 60.0
BcaB04g17452 Brassica carinata HOM05D009238 ORTHO05D019868 6.1e-49 198.4 332 42.2
BolC2t10791H Brassica oleracea HOM05D009238 ORTHO05D019868 1.2e-41 174.1 88 96.6
BolC2t07633H Brassica oleracea HOM05D009238 ORTHO05D019868 7.9e-33 144.8 158 56.3
BolC8t49470H Brassica oleracea HOM05D009238 ORTHO05D019868 5.9e-28 128.6 234 41.0
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 1.0e-27 127.9 317 34.4
BraA01t01668Z Brassica rapa HOM05D009238 ORTHO05D019868 1.3e-27 127.5 232 43.5
BraA02t08674Z Brassica rapa HOM05D009238 ORTHO05D012489 5.0e-27 125.6 292 33.9
C06p11850 Brassica napus HOM05D009238 ORTHO05D012489 3.6e-25 119.4 268 35.1
BraA04t16367Z Brassica rapa HOM05D009238 ORTHO05D012489 2.3e-24 116.7 321 32.1
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-22 110.2 321 31.5
A04p06620 Brassica napus HOM05D009238 ORTHO05D012489 1.1e-18 97.8 311 29.9
BcaC02g12210 Brassica carinata HOM05D000003 ORTHO05D000925 4.7e-17 92.4 261 33.0
BcaC07g39368 Brassica carinata HOM05D009238 ORTHO05D012489 3.7e-14 82.8 292 29.1
BcaB05g23728 Brassica carinata HOM05D009238 ORTHO05D012489 4.8e-14 82.4 327 27.8
C02p30810 Brassica napus HOM05D009238 ORTHO05D012489 1.1e-13 81.3 83 50.6
BraA03t12194Z Brassica rapa HOM05D009238 ORTHO05D012489 2.2e-11 73.6 84 47.6
BolC6t37993H Brassica oleracea HOM05D005254 ORTHO05D012489 3.8e-11 72.8 135 40.7
BcaB01g02479 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-09 67.0 85 47.1
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-09 67.0 140 33.6
BolC2t08494H Brassica oleracea HOM05D009238 ORTHO05D012489 2.1e-09 67.0 108 41.7
BcaB04g17991 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-08 64.7 69 47.8
BcaC07g39656 Brassica carinata HOM05D000722 ORTHO05D000590 1.0e-08 64.7 127 41.7
BolC6t35760H Brassica oleracea HOM05D023674 ORTHO05D033661 1.4e-08 64.3 120 41.7
A10p16820 Brassica napus HOM05D016815 ORTHO05D012489 6.8e-08 62.0 103 39.8
C03p47070 Brassica napus HOM05D016815 ORTHO05D020093 4.4e-07 59.3 89 40.4
BcaC08g47032 Brassica carinata HOM05D009238 ORTHO05D012489 7.5e-07 58.5 132 41.7
BolC6t35761H Brassica oleracea HOM05D016815 ORTHO05D012489 9.8e-07 58.2 107 37.4
BraA03t13842Z Brassica rapa HOM05D009238 ORTHO05D020093 1.3e-06 57.8 120 36.7


User provided reference genes

Program Settings