Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p47310 Brassica napus HOM05D027939 ORTHO05D028162 2.1e-102 375.9 225 100.0
BolC2t10771H Brassica oleracea HOM05D027939 ORTHO05D028162 2.1e-102 375.9 225 100.0
A02p29870 Brassica napus HOM05D027939 ORTHO05D028162 1.5e-31 140.6 128 73.4
BraA02t08008Z Brassica rapa HOM05D027939 ORTHO05D028162 5.9e-28 128.6 148 60.8
HanXRQChr07g0190251 Helianthus annuus HOM05D000004 ORTHO05D000002 9.7e-15 84.7 71 49.3
HanXRQChr10g0295121 Helianthus annuus HOM05D000004 ORTHO05D000002 9.7e-15 84.7 71 49.3
HanXRQChr13g0415051 Helianthus annuus HOM05D000004 ORTHO05D000002 9.7e-15 84.7 71 49.3
Thhalv10000656m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 1.7e-14 84.0 89 48.3
PSO782G4047 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-14 82.8 125 41.6
Rhsim02G0160700 Rhododendron simsii HOM05D000004 ORTHO05D000563 3.7e-14 82.8 66 59.1
Rhsim13G0219800 Rhododendron simsii HOM05D000004 ORTHO05D000563 3.7e-14 82.8 66 59.1
RhsimUnG0230800 Rhododendron simsii HOM05D000004 ORTHO05D000563 3.7e-14 82.8 66 59.1
Thhalv10016056m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 4.8e-14 82.4 65 56.9
Rhsim02G0208700 Rhododendron simsii HOM05D000004 ORTHO05D000563 4.8e-14 82.4 66 59.1
Thhalv10012009m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 6.3e-14 82.0 70 55.7
HanXRQChr16g0519861 Helianthus annuus HOM05D000004 ORTHO05D000002 6.3e-14 82.0 74 47.3
Sabra15G0032500 Salix brachista HOM05D004254 ORTHO05D000563 6.3e-14 82.0 97 45.4
FvH4_4g08352 Fragaria vesca HOM05D000004 ORTHO05D000002 1.4e-13 80.9 62 58.1
Sp1g29630 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.4e-13 80.9 94 45.7
PSO067G0006 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-13 80.5 103 45.6
PSO832G0610 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-13 80.5 103 45.6
Atru.chr9.1417 Acer truncatum HOM05D000004 ORTHO05D000563 2.4e-13 80.1 81 46.9
PSO384G1745 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-13 80.1 98 46.9
PSO063G1387 Papaver somniferum HOM05D000004 ORTHO05D000002 3.1e-13 79.7 98 46.9
PSO423G0076 Papaver somniferum HOM05D000004 ORTHO05D000002 3.1e-13 79.7 59 61.0
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.1e-13 79.7 68 50.0
Sabra19G0021900 Salix brachista HOM05D000004 ORTHO05D000002 3.1e-13 79.7 74 45.9
PSO170G4796 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-13 79.3 59 61.0
Rhsim07G0165900 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.1e-13 79.3 66 57.6
Thhalv10003071m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 5.3e-13 79.0 89 43.8
Rhsim02G0016700 Rhododendron simsii HOM05D003956 ORTHO05D004850 5.3e-13 79.0 68 48.5
Rhsim04G0049200 Rhododendron simsii HOM05D000004 ORTHO05D000563 5.3e-13 79.0 68 48.5
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 5.3e-13 79.0 68 48.5
Thhalv10009839m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 7.0e-13 78.6 59 55.9
Thhalv10019697m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 7.0e-13 78.6 59 55.9
Rhsim04G0098200 Rhododendron simsii HOM05D000004 ORTHO05D000563 7.0e-13 78.6 68 51.5
PSO801G0002 Papaver somniferum HOM05D000004 ORTHO05D000002 9.1e-13 78.2 61 54.1
Sabra16G0279800 Salix brachista HOM05D000013 ORTHO05D000002 9.1e-13 78.2 68 55.9
Sp5g17530 Schrenkiella parvula HOM05D000004 ORTHO05D000563 9.1e-13 78.2 79 51.9
Thhalv10023123m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 1.2e-12 77.8 92 43.5
BolC3t20667H Brassica oleracea HOM05D000004 ORTHO05D000563 1.6e-12 77.4 60 60.0
ECA236G0673 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-12 77.4 65 49.2
ECA246G2152 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-12 77.4 68 45.6
PSO210G5884 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-12 77.4 108 43.5
PSO339G1513 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-12 77.4 98 44.9
SabraUnG0000900 Salix brachista HOM05D000004 ORTHO05D000002 1.6e-12 77.4 116 35.3
Sp7g08750 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.6e-12 77.4 95 46.3
ECA246G2687 Erigeron canadensis HOM05D000321 ORTHO05D000002 2.6e-12 76.6 68 45.6
Thhalv10015528m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 2.6e-12 76.6 90 43.3
PSO017G2500 Papaver somniferum HOM05D000004 ORTHO05D000002 2.6e-12 76.6 64 56.2
ECA246G4319 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.5e-12 76.3 68 45.6
ECA238G1641 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.5e-12 75.9 68 44.1
ECA246G2782 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.5e-12 75.9 71 49.3
PSO675G6845 Papaver somniferum HOM05D000004 ORTHO05D000002 4.5e-12 75.9 68 50.0
PGR004G1008 Punica granatum HOM05D000004 ORTHO05D000002 4.5e-12 75.9 67 52.2
BcaC08g47040 Brassica carinata HOM05D000004 ORTHO05D000563 5.9e-12 75.5 61 54.1
ECA240G4601 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.9e-12 75.5 68 44.1
PSO170G0021 Papaver somniferum HOM05D000004 ORTHO05D000002 5.9e-12 75.5 61 50.8
PSO210G3864 Papaver somniferum HOM05D000004 ORTHO05D000002 5.9e-12 75.5 64 56.2
PSO384G2288 Papaver somniferum HOM05D000004 ORTHO05D000002 7.7e-12 75.1 69 50.7
PSO724G0202 Papaver somniferum HOM05D000004 ORTHO05D000002 7.7e-12 75.1 75 45.3
PGR102G1331 Punica granatum HOM05D000004 ORTHO05D000002 7.7e-12 75.1 67 50.7
PSO339G3112 Papaver somniferum HOM05D000004 ORTHO05D000002 1.0e-11 74.7 72 48.6
BolC5t31127H Brassica oleracea HOM05D000004 ORTHO05D000563 1.3e-11 74.3 63 55.6
ECA248G0299 Erigeron canadensis HOM05D000006 ORTHO05D000091 1.3e-11 74.3 84 42.9
PSO063G1221 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-11 74.3 67 50.7
PSO675G4320 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-11 74.3 67 49.3
Rhsim06G0081400 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.3e-11 74.3 68 51.5
BolC3t15470H Brassica oleracea HOM05D000004 ORTHO05D000563 1.7e-11 73.9 70 48.6
Thhalv10027485m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 1.7e-11 73.9 60 55.0
PSO017G5027 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-11 73.9 68 48.5
PSO063G4042 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-11 73.9 68 48.5
PSO063G7638 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-11 73.9 64 54.7
PSO161G0062 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-11 73.9 68 48.5
PSO478G0935 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-11 73.9 68 48.5
PSO675G1206 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-11 73.9 68 48.5
PGR134G0003 Punica granatum HOM05D000004 ORTHO05D000002 1.7e-11 73.9 69 50.7
PSO478G0516 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-11 73.6 68 48.5
Actinidia03258 Actinidia chinensis HOM05D057492 ORTHO05D000563 3.8e-11 72.8 67 50.7
BolC2t07546H Brassica oleracea HOM05D000004 ORTHO05D000563 3.8e-11 72.8 64 53.1
ECA233G2099 Erigeron canadensis HOM05D000005 ORTHO05D000012 3.8e-11 72.8 68 45.6
Sabra19G0020900 Salix brachista HOM05D000004 ORTHO05D000002 3.8e-11 72.8 74 43.2
TWI59G0527 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.8e-11 72.8 111 36.0
ECA240G1927 Erigeron canadensis HOM05D000145 ORTHO05D000115 5.0e-11 72.4 68 42.6
Thhalv10002819m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 5.0e-11 72.4 59 54.2
Thhalv10012218m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 5.0e-11 72.4 68 50.0
SGA_v2.0_scaffold98G29414 Striga asiatica HOM05D012397 ORTHO05D000002 6.5e-11 72.0 61 50.8
Prupe.5G246300 Prunus persica HOM05D000004 ORTHO05D000002 8.5e-11 71.6 58 58.6
BolC2t10054H Brassica oleracea HOM05D000004 ORTHO05D000563 1.1e-10 71.2 60 56.7
SGA_v2.0_scaffold142G35703 Striga asiatica HOM05D000004 ORTHO05D000002 1.9e-10 70.5 60 53.3
PSO675G3106 Papaver somniferum HOM05D000004 ORTHO05D000002 4.2e-10 69.3 68 45.6
TPR.G27212 Trifolium pratense HOM05D035450 ORTHO05D010126 4.2e-10 69.3 90 40.0
BolC6t35188H Brassica oleracea HOM05D000004 ORTHO05D000563 5.5e-10 68.9 96 40.6
Rhsim03G0265700 Rhododendron simsii HOM05D031804 ORTHO05D000563 5.5e-10 68.9 64 51.6
RhsimUnG0129600 Rhododendron simsii HOM05D031804 ORTHO05D000563 5.5e-10 68.9 64 51.6
Rhsim09G0023400 Rhododendron simsii HOM05D000004 ORTHO05D000563 7.2e-10 68.6 68 44.1
TWI09G0867 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.2e-10 68.6 63 44.4
PGR119G1429 Punica granatum HOM05D000004 ORTHO05D000002 9.4e-10 68.2 56 60.7
Hma1.2p1_2925F.1_g330460 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.2e-09 67.8 95 38.9
PGR031G3219 Punica granatum HOM05D000004 ORTHO05D000002 2.1e-09 67.0 69 44.9
Thhalv10019653m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 2.7e-09 66.6 58 53.4
PSO675G8805 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-09 66.6 89 42.7
BolC4t23166H Brassica oleracea HOM05D000004 ORTHO05D000563 6.1e-09 65.5 58 53.4
Thhalv10002967m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 6.1e-09 65.5 100 35.0
PGR102G3222 Punica granatum HOM05D000004 ORTHO05D000002 6.1e-09 65.5 67 44.8
Thhalv10028087m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 8.0e-09 65.1 64 45.3
PGR031G1659 Punica granatum HOM05D000004 ORTHO05D000002 8.0e-09 65.1 109 40.4
SGA_v2.0_scaffold366G50025 Striga asiatica HOM05D000004 ORTHO05D000002 8.0e-09 65.1 60 50.0
Thhalv10002910m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 1.0e-08 64.7 61 45.9
Sp5g16670 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.4e-08 64.3 44 61.4
PSO356G0054 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-08 63.9 42 64.3
LjContig00141g0019718 Lotus japonicus HOM05D000004 ORTHO05D000002 3.0e-08 63.2 76 44.7
QL09p008068 Quercus lobata HOM05D000004 ORTHO05D009660 4.0e-08 62.8 99 35.4
Rhsim10G0091100 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.0e-08 62.8 50 50.0
Atru.chr6.368 Acer truncatum HOM05D000004 ORTHO05D000563 5.2e-08 62.4 53 56.6
SHI23244 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-08 62.4 88 45.5
BolC7t43890H Brassica oleracea HOM05D000004 ORTHO05D000563 6.7e-08 62.0 98 41.8
Rhsim06G0029600 Rhododendron simsii HOM05D000004 ORTHO05D000563 6.7e-08 62.0 54 53.7
Actinidia04586 Actinidia chinensis HOM05D000004 ORTHO05D000002 8.8e-08 61.6 42 61.9
Oeu010282.1 Olea europaea HOM05D000004 ORTHO05D000563 8.8e-08 61.6 57 50.9
BolC4t26370H Brassica oleracea HOM05D000004 ORTHO05D000563 2.0e-07 60.5 107 35.5
Thhalv10012371m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 2.6e-07 60.1 55 50.9
SHI09745 Sapria himalayana HOM05D000019 ORTHO05D000002 3.3e-07 59.7 100 35.0
Actinidia12548 Actinidia chinensis HOM05D000004 ORTHO05D000563 4.4e-07 59.3 56 53.6
BolC9t54975H Brassica oleracea HOM05D000004 ORTHO05D000002 4.4e-07 59.3 123 34.1
SGA_v2.0_scaffold217G42416 Striga asiatica HOM05D000004 ORTHO05D000002 4.4e-07 59.3 60 46.7
BcaC05g26683 Brassica carinata HOM05D000004 ORTHO05D000563 5.7e-07 58.9 52 53.8
PGR083G2793 Punica granatum HOM05D000004 ORTHO05D000002 5.7e-07 58.9 86 39.5
Hund17465 Selenicereus undatus HOM05D008980 ORTHO05D016385 5.7e-07 58.9 78 37.2
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 9.7e-07 58.2 91 37.4
QL11p024776 Quercus lobata HOM05D000004 ORTHO05D000002 9.7e-07 58.2 91 37.4
PGR142G2802 Punica granatum HOM05D000004 ORTHO05D000002 1.7e-06 57.4 86 39.5
ECA236G3294 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.2e-06 57.0 89 33.7
Rhsim10G0002800 Rhododendron simsii HOM05D000792 ORTHO05D001021 2.2e-06 57.0 64 40.6
Thecc.01G105600 Theobroma cacao HOM05D000004 ORTHO05D000563 2.8e-06 56.6 104 31.7
VMungo0647G0994 Vigna mungo HOM05D000632 ORTHO05D000946 2.8e-06 56.6 53 45.3
Atru.chr6.2464 Acer truncatum HOM05D000004 ORTHO05D000563 3.7e-06 56.2 57 43.9
ECA238G1029 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-06 56.2 124 30.6
Hma1.2p1_0314F.1_g122100 Hydrangea macrophylla HOM05D000004 ORTHO05D009927 3.7e-06 56.2 99 33.3
Medtr4g102460 Medicago truncatula HOM05D000004 ORTHO05D000002 3.7e-06 56.2 91 33.0
PGR002G0001 Punica granatum HOM05D000004 ORTHO05D000002 3.7e-06 56.2 97 36.1
PSO781G0180 Papaver somniferum HOM05D000004 ORTHO05D000002 4.8e-06 55.8 39 56.4


User provided reference genes

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