Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p47160 Brassica napus HOM05D000111 ORTHO05D011603 3.1e-57 224.9 115 100.0
BolC2t10760H Brassica oleracea HOM05D000111 ORTHO05D011603 4.4e-56 221.1 113 98.2
BcaC03g16837 Brassica carinata HOM05D000111 ORTHO05D011603 3.9e-52 208.0 107 96.3
BraA02t07997Z Brassica rapa HOM05D000111 ORTHO05D011603 1.5e-51 206.1 113 92.9
A02p29750 Brassica napus HOM05D000111 ORTHO05D011603 4.3e-51 204.5 111 94.6
CARHR175590 Cardamine hirsuta HOM05D000111 ORTHO05D011603 8.1e-34 147.1 112 67.9
Sp2g11060 Schrenkiella parvula HOM05D000111 ORTHO05D011603 3.8e-31 138.3 107 67.3
AL8G12260 Arabidopsis lyrata HOM05D000111 ORTHO05D011603 2.3e-28 129.0 113 64.6
AT5G46200 Arabidopsis thaliana HOM05D000111 ORTHO05D011603 5.7e-27 124.4 113 60.2
Carub.0008s0172 Capsella rubella HOM05D000111 ORTHO05D011603 3.1e-25 118.6 117 58.1
BcaC06g31491 Brassica carinata HOM05D000111 ORTHO05D011603 1.9e-22 109.4 82 73.2
Thhalv10000787m.g Eutrema salsugineum HOM05D000111 ORTHO05D011603 9.3e-22 107.1 67 76.1
Carub.0007s2350 Capsella rubella HOM05D000111 ORTHO05D011603 1.9e-19 99.4 105 48.6
Carub.0002s0496 Capsella rubella HOM05D000111 ORTHO05D011603 1.3e-18 96.7 105 47.6
Carub.0008s0590 Capsella rubella HOM05D000111 ORTHO05D011603 1.4e-17 93.2 105 45.7
AT4G17860 Arabidopsis thaliana HOM05D000111 ORTHO05D011603 2.1e-13 79.3 107 39.3
Carub.0008s0110 Capsella rubella HOM05D000111 ORTHO05D011603 2.7e-13 79.0 107 43.9
Thhalv10027151m.g Eutrema salsugineum HOM05D000111 ORTHO05D011603 7.9e-13 77.4 89 42.7
AT5G46820 Arabidopsis thaliana HOM05D000111 ORTHO05D011603 8.8e-12 73.9 70 51.4
AL8G11510 Arabidopsis lyrata HOM05D000111 ORTHO05D011603 1.5e-11 73.2 101 46.5
AT5G46810 Arabidopsis thaliana HOM05D000111 ORTHO05D011603 3.3e-11 72.0 80 45.0
CARHR224580 Cardamine hirsuta HOM05D000111 ORTHO05D011603 4.3e-11 71.6 104 41.3
Thhalv10003320m.g Eutrema salsugineum HOM05D000111 ORTHO05D011603 4.3e-11 71.6 75 49.3
THA.LOC104806704 Tarenaya hassleriana HOM05D000111 ORTHO05D001475 2.0e-08 62.8 94 38.3
THA.LOC104817418 Tarenaya hassleriana HOM05D000111 ORTHO05D001475 3.4e-08 62.0 91 39.6
Thhalv10012048m.g Eutrema salsugineum HOM05D000111 ORTHO05D000134 8.5e-07 57.4 104 41.3
THA.LOC104806929 Tarenaya hassleriana HOM05D000111 ORTHO05D001475 1.1e-06 57.0 110 36.4
Aqoxy7G03878 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 1.4e-06 56.6 86 34.9
AL7G36670 Arabidopsis lyrata HOM05D000111 ORTHO05D011603 2.5e-06 55.8 43 58.1
Aqoxy2G02608 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 4.2e-06 55.1 73 37.0
CANSAT11G1499 Cannabis sativa HOM05D000111 ORTHO05D000134 9.4e-06 53.9 63 39.7
PSO675G1554 Papaver somniferum HOM05D000111 ORTHO05D001475 9.4e-06 53.9 60 45.0


User provided reference genes

Program Settings