Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p46470 Brassica napus HOM05D000151 ORTHO05D011749 3.9e-65 251.1 112 100.0
BcaB07g30439 Brassica carinata HOM05D000151 ORTHO05D011749 1.2e-50 203.0 109 81.7
Sp2g23270 Schrenkiella parvula HOM05D000151 ORTHO05D011749 3.9e-41 171.4 94 78.7
A08p18480 Brassica napus HOM05D000151 ORTHO05D011749 5.1e-41 171.0 94 80.9
BcaB03g12715 Brassica carinata HOM05D000151 ORTHO05D011749 1.1e-40 169.9 94 79.8
Thhalv10005528m.g Eutrema salsugineum HOM05D000151 ORTHO05D011749 1.1e-40 169.9 95 78.9
BolC3t21082H Brassica oleracea HOM05D000151 ORTHO05D011749 2.5e-40 168.7 94 79.8
Carub.0006s2176 Capsella rubella HOM05D000151 ORTHO05D011749 1.7e-39 166.0 94 78.7
BraA08t33810Z Brassica rapa HOM05D000151 ORTHO05D011749 1.4e-35 152.9 83 80.7
AL6G35370 Arabidopsis lyrata HOM05D000151 ORTHO05D011749 4.4e-32 141.4 94 68.1
AT5G24040 Arabidopsis thaliana HOM05D000151 ORTHO05D011749 5.7e-32 141.0 94 67.0
Carub.0006s2177 Capsella rubella HOM05D000151 ORTHO05D011749 7.4e-32 140.6 94 67.0
AL6G35360 Arabidopsis lyrata HOM05D000151 ORTHO05D011749 6.3e-31 137.5 94 69.1
Aa31sc89G100 Aethionema arabicum HOM05D000151 ORTHO05D011749 5.0e-28 127.9 97 61.9
BolC3t21081H Brassica oleracea HOM05D000151 ORTHO05D011749 1.9e-27 125.9 99 61.6
THA.LOC104821381 Tarenaya hassleriana HOM05D000151 ORTHO05D011749 1.0e-25 120.2 94 55.3
Aa31LG2G17030 Aethionema arabicum HOM05D000151 ORTHO05D011749 1.4e-25 119.8 97 59.8
C03p87630 Brassica napus HOM05D000151 ORTHO05D011749 2.6e-24 115.5 66 75.8
BcaNung01204 Brassica carinata HOM05D000151 ORTHO05D011749 5.9e-21 104.4 102 53.9
BraA06t26409Z Brassica rapa HOM05D000151 ORTHO05D011749 1.3e-20 103.2 94 55.3
A06p34830 Brassica napus HOM05D002525 ORTHO05D007180 1.7e-20 102.8 91 56.0
BcaNung01827 Brassica carinata HOM05D000151 ORTHO05D011749 2.9e-20 102.1 94 55.3
C07p43680 Brassica napus HOM05D000151 ORTHO05D011749 2.9e-20 102.1 94 55.3
BolC7t44898H Brassica oleracea HOM05D000151 ORTHO05D011749 2.9e-20 102.1 94 55.3
Aa31sc89G110 Aethionema arabicum HOM05D000151 ORTHO05D011749 8.5e-20 100.5 76 57.9
Aa31LG11G3330 Aethionema arabicum HOM05D000151 ORTHO05D011749 1.1e-19 100.1 96 52.1
LjContig00081g0016741 Lotus japonicus HOM05D000151 ORTHO05D000074 5.2e-09 64.7 96 36.5
Medtr3g030355 Medicago truncatula HOM05D000151 ORTHO05D000074 8.8e-09 63.9 82 41.5
arahy.Tifrunner.gnm1.ann1.2FAG51 Arachis hypogaea HOM05D000151 ORTHO05D000074 1.2e-08 63.5 101 31.7
AT2G17030 Arabidopsis thaliana HOM05D000151 ORTHO05D000074 2.0e-08 62.8 120 34.2
Aa31LG8G14220 Aethionema arabicum HOM05D000151 ORTHO05D000074 7.5e-08 60.8 59 42.4
Duzib052G1153 Durio zibethinus HOM05D000151 ORTHO05D000074 1.3e-07 60.1 62 40.3
Eucgr.I01470 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.3e-07 60.1 56 42.9
Medtr6g018360 Medicago truncatula HOM05D000151 ORTHO05D000074 1.3e-07 60.1 87 37.9
Duzib132G0877 Durio zibethinus HOM05D000151 ORTHO05D000074 1.7e-07 59.7 75 38.7
Sp3g30320 Schrenkiella parvula HOM05D000151 ORTHO05D000074 1.7e-07 59.7 58 43.1
AL3G49820 Arabidopsis lyrata HOM05D000151 ORTHO05D000074 2.2e-07 59.3 59 44.1
Duzib132G0179 Durio zibethinus HOM05D000151 ORTHO05D000074 2.8e-07 58.9 59 42.4
TPR.G35299 Trifolium pratense HOM05D000151 ORTHO05D000074 2.8e-07 58.9 47 51.1
Atru.chr5.3472 Acer truncatum HOM05D000151 ORTHO05D000074 3.7e-07 58.5 94 33.0
BraA03t13747Z Brassica rapa HOM05D006294 ORTHO05D007668 3.7e-07 58.5 58 44.8
Medtr6g027040 Medicago truncatula HOM05D000151 ORTHO05D000074 3.7e-07 58.5 94 31.9
Thecc.02G052700 Theobroma cacao HOM05D000151 ORTHO05D000074 3.7e-07 58.5 62 41.9
Medtr3g029650 Medicago truncatula HOM05D000151 ORTHO05D000074 4.8e-07 58.2 51 49.0
Medtr6g018400 Medicago truncatula HOM05D000151 ORTHO05D000074 4.8e-07 58.2 88 36.4
A03p46230 Brassica napus HOM05D006294 ORTHO05D007668 6.3e-07 57.8 58 44.8
Medtr3g029920 Medicago truncatula HOM05D000151 ORTHO05D000074 6.3e-07 57.8 84 33.3
SGA_v2.0_scaffold60G20988 Striga asiatica HOM05D000151 ORTHO05D000074 8.3e-07 57.4 92 30.4
Dinv42545 Davidia involucrata HOM05D000151 ORTHO05D000074 1.1e-06 57.0 92 34.8
Medtr3g029640 Medicago truncatula HOM05D000151 ORTHO05D000074 1.1e-06 57.0 53 45.3
Medtr6g018390 Medicago truncatula HOM05D000151 ORTHO05D000074 1.1e-06 57.0 51 47.1
CARHR107350 Cardamine hirsuta HOM05D000151 ORTHO05D000074 1.4e-06 56.6 58 44.8
Ciclev10028612m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.8e-06 56.2 56 44.6
COL.COLO4_18005 Corchorus olitorius HOM05D000151 ORTHO05D000074 1.8e-06 56.2 98 28.6
BcaB08g34687 Brassica carinata HOM05D000151 ORTHO05D000074 2.4e-06 55.8 58 41.4
Haze_03687 Corylus avellana HOM05D000151 ORTHO05D000074 2.4e-06 55.8 111 31.5
Medtr1g007230 Medicago truncatula HOM05D000151 ORTHO05D000074 2.4e-06 55.8 60 41.7
Peaxi162Scf00174g01118 Petunia axillaris HOM05D000151 ORTHO05D000074 2.4e-06 55.8 75 33.3
THA.LOC104819663 Tarenaya hassleriana HOM05D000151 ORTHO05D000074 2.4e-06 55.8 59 44.1
MELO3C013657.2 Cucumis melo HOM05D000151 ORTHO05D000074 3.1e-06 55.5 102 33.3
Medtr3g029670 Medicago truncatula HOM05D000151 ORTHO05D000074 4.1e-06 55.1 51 51.0
Eucgr.I01472 Eucalyptus grandis HOM05D000151 ORTHO05D000074 5.4e-06 54.7 64 40.6
Thecc.02G052600 Theobroma cacao HOM05D000151 ORTHO05D000074 5.4e-06 54.7 75 37.3
Medtr6g018315 Medicago truncatula HOM05D000151 ORTHO05D000074 7.0e-06 54.3 76 42.1
TPR.G27029 Trifolium pratense HOM05D001528 ORTHO05D002760 7.0e-06 54.3 38 57.9
Medtr2g047180 Medicago truncatula HOM05D000151 ORTHO05D000074 9.1e-06 53.9 51 47.1
Medtr6g027100 Medicago truncatula HOM05D000151 ORTHO05D000074 9.1e-06 53.9 94 31.9
Phvul.005G022400 Phaseolus vulgaris HOM05D000151 ORTHO05D000074 9.1e-06 53.9 49 46.9


User provided reference genes

Program Settings