Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p46330 Brassica napus HOM05D000313 ORTHO05D021935 1.6e-77 292.7 149 100.0
BolC2t10414H Brassica oleracea HOM05D004224 ORTHO05D021935 2.1e-18 96.3 93 55.9
BolC6t36307H Brassica oleracea HOM05D000313 ORTHO05D021935 8.1e-18 94.4 83 61.4
BcaC08g43795 Brassica carinata HOM05D000313 ORTHO05D021935 1.8e-17 93.2 82 62.2
BcaC08g43796 Brassica carinata HOM05D000313 ORTHO05D021935 1.8e-17 93.2 82 62.2
A09p30460 Brassica napus HOM05D000305 ORTHO05D000065 6.4e-15 84.7 68 63.2
BraA09t38616Z Brassica rapa HOM05D000305 ORTHO05D000065 6.4e-15 84.7 68 63.2
A09p35480 Brassica napus HOM05D000305 ORTHO05D000065 8.4e-15 84.3 55 70.9
A10p33690 Brassica napus HOM05D000313 ORTHO05D000065 8.4e-15 84.3 55 70.9
BolC3t15032H Brassica oleracea HOM05D000305 ORTHO05D000065 8.4e-15 84.3 55 70.9
BraA05t19977Z Brassica rapa HOM05D000313 ORTHO05D000065 8.4e-15 84.3 68 63.2
C02p20670 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-14 83.2 55 70.9
C03p67840 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-14 83.2 68 63.2
BolC2t08209H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-14 83.2 55 70.9
BolSC21t60252H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-14 83.2 68 63.2
BcaC08g46159 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-14 82.8 55 69.1
C08p01640 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-14 82.8 59 67.8
BolC8t46967H Brassica oleracea HOM05D000313 ORTHO05D000065 2.4e-14 82.8 59 67.8
BcaB01g04686 Brassica carinata HOM05D000313 ORTHO05D000065 9.3e-14 80.9 68 60.3
BcaB06g28312 Brassica carinata HOM05D000313 ORTHO05D000065 9.3e-14 80.9 68 60.3
BolC6t37050H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-13 80.5 55 67.3
BcaB05g24149 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-13 79.7 56 66.1
BcaC09g50729 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-13 79.3 55 67.3
BolC6t36657H Brassica oleracea HOM05D000305 ORTHO05D000065 6.0e-13 78.2 70 60.0
BcaC03g16108 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-12 77.0 69 53.6
BcaB02g06416 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-12 75.9 59 55.9
BcaB07g32488 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-12 75.5 52 65.4
BcaC03g14692 Brassica carinata HOM05D000313 ORTHO05D000065 6.7e-12 74.7 68 51.5
BcaC04g22409 Brassica carinata HOM05D005044 ORTHO05D000065 6.7e-12 74.7 68 51.5
A04p08140 Brassica napus HOM05D000313 ORTHO05D000065 6.7e-12 74.7 56 58.9
C05p00200 Brassica napus HOM05D000313 ORTHO05D000065 6.7e-12 74.7 61 59.0
C07p05180 Brassica napus HOM05D000313 ORTHO05D000065 6.7e-12 74.7 61 59.0
BcaC01g02208 Brassica carinata HOM05D000313 ORTHO05D000065 8.7e-12 74.3 57 64.9
BcaC02g10952 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-11 73.9 56 55.4
C04p23330 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-11 73.9 56 55.4
C06p47470 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-11 73.6 61 57.4
BraA08t32937Z Brassica rapa HOM05D000313 ORTHO05D000065 1.5e-11 73.6 61 57.4
BcaB07g33009 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-11 72.4 56 60.7
BolC9t54870H Brassica oleracea HOM05D000313 ORTHO05D000065 3.3e-11 72.4 68 51.5
BcaC01g05457 Brassica carinata HOM05D000305 ORTHO05D000065 7.4e-11 71.2 56 62.5
BolC7t43481H Brassica oleracea HOM05D000305 ORTHO05D000065 7.4e-11 71.2 55 56.4
C05p31210 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-10 70.5 57 56.1
BraA09t40035Z Brassica rapa HOM05D000313 ORTHO05D000065 1.6e-10 70.1 56 53.6
BcaB01g01607 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-10 69.7 55 60.0
BcaB05g24332 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-10 69.7 68 50.0
BcaNung07285 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-10 69.7 55 60.0
C08p09500 Brassica napus HOM05D000096 ORTHO05D000045 2.1e-10 69.7 76 47.4
BcaC02g08524 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-10 69.3 56 51.8
C04p53440 Brassica napus HOM05D000313 ORTHO05D000065 4.8e-10 68.6 56 51.8
BolC4t26899H Brassica oleracea HOM05D000313 ORTHO05D000065 4.8e-10 68.6 56 51.8
BcaB06g25574 Brassica carinata HOM05D000313 ORTHO05D000065 6.2e-10 68.2 51 60.8
A09p41290 Brassica napus HOM05D008070 ORTHO05D001888 6.2e-10 68.2 56 53.6
C03p73900 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-10 68.2 57 52.6
C04p23610 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-10 68.2 56 53.6
C09p30920 Brassica napus HOM05D000313 ORTHO05D016800 6.2e-10 68.2 56 53.6
BraA09t39622Z Brassica rapa HOM05D008070 ORTHO05D001888 6.2e-10 68.2 56 53.6
BcaC04g19485 Brassica carinata HOM05D000305 ORTHO05D000065 3.1e-09 65.9 52 63.5
AL614U10020 Arabidopsis lyrata HOM05D000313 ORTHO05D000065 4.0e-09 65.5 54 53.7
BolC2t10493H Brassica oleracea HOM05D000313 ORTHO05D000065 4.0e-09 65.5 56 51.8
BolC7t45455H Brassica oleracea HOM05D000313 ORTHO05D000065 4.0e-09 65.5 40 77.5
BcaB06g27784 Brassica carinata HOM05D000305 ORTHO05D000065 5.3e-09 65.1 62 48.4
BcaC01g05432 Brassica carinata HOM05D013219 ORTHO05D000065 5.3e-09 65.1 50 64.0
BcaC04g21511 Brassica carinata HOM05D000313 ORTHO05D016800 5.3e-09 65.1 54 51.9
BolC3t15057H Brassica oleracea HOM05D000313 ORTHO05D000065 5.3e-09 65.1 50 64.0
C03p26720 Brassica napus HOM05D000313 ORTHO05D000065 6.9e-09 64.7 50 62.0
BolC4t25557H Brassica oleracea HOM05D000313 ORTHO05D000065 9.0e-09 64.3 50 62.0
BolC3t19608H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-08 63.9 40 72.5
C06p08340 Brassica napus HOM05D000313 ORTHO05D016800 1.5e-08 63.5 63 46.0
A08p05150 Brassica napus HOM05D004768 ORTHO05D005812 2.6e-08 62.8 68 44.1
C01p21550 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-08 62.0 38 76.3
BolC1t02075H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-08 62.0 38 76.3
BraA08t32532Z Brassica rapa HOM05D004768 ORTHO05D005812 4.5e-08 62.0 56 50.0
BcaC04g19486 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-08 61.6 56 51.8
C09p55230 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-08 61.6 56 51.8
BraA05t19978Z Brassica rapa HOM05D000313 ORTHO05D000065 5.8e-08 61.6 56 51.8
C05p00190 Brassica napus HOM05D000313 ORTHO05D000065 9.9e-08 60.8 57 49.1
C07p05170 Brassica napus HOM05D000313 ORTHO05D000065 9.9e-08 60.8 57 49.1
BolC6t37003H Brassica oleracea HOM05D000313 ORTHO05D000065 9.9e-08 60.8 57 49.1
BcaC05g26730 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-07 60.5 44 68.2
BcaC07g38196 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-07 60.5 42 61.9
C04p23320 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-07 60.5 60 46.7
BcaC04g18697 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-07 59.3 92 43.5
C02p37980 Brassica napus HOM05D019666 ORTHO05D028044 4.9e-07 58.5 100 43.0
BcaC03g15531 Brassica carinata HOM05D019989 ORTHO05D021725 6.4e-07 58.2 84 41.7
C08p04870 Brassica napus HOM05D000313 ORTHO05D000065 8.4e-07 57.8 75 44.0
C02p32130 Brassica napus HOM05D019989 ORTHO05D021725 1.4e-06 57.0 84 41.7
C08p23130 Brassica napus HOM05D000313 ORTHO05D021694 1.9e-06 56.6 67 44.8
C05p32580 Brassica napus HOM05D000313 ORTHO05D041766 2.4e-06 56.2 39 66.7
BolC5t31991H Brassica oleracea HOM05D000313 ORTHO05D041766 2.4e-06 56.2 39 66.7
BraA01t02708Z Brassica rapa HOM05D000313 ORTHO05D021935 2.4e-06 56.2 92 39.1
BcaC03g14374 Brassica carinata HOM05D000305 ORTHO05D000065 3.2e-06 55.8 66 43.9
A05p18420 Brassica napus HOM05D017138 ORTHO05D016749 3.2e-06 55.8 75 41.3
C06p53880 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-06 55.8 66 43.9
C07p05430 Brassica napus HOM05D003766 ORTHO05D016749 7.1e-06 54.7 56 50.0


User provided reference genes

Program Settings