Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p46270 Brassica napus HOM05D003570 ORTHO05D027618 7.3e-84 313.9 167 100.0
BraA02t07950Z Brassica rapa HOM05D003570 ORTHO05D027618 1.1e-74 283.5 167 91.6
A02p29200 Brassica napus HOM05D003570 ORTHO05D027618 9.9e-73 276.9 167 89.8
BcaC03g16752 Brassica carinata HOM05D003570 ORTHO05D027618 1.9e-55 219.5 168 78.0
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 2.7e-22 109.4 147 48.3
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 8.0e-22 107.8 214 37.4
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.0e-21 107.5 206 43.7
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 1.0e-21 107.5 213 40.8
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 1.4e-21 107.1 213 41.3
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 1.8e-21 106.7 214 37.4
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 1.8e-21 106.7 214 43.5
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 4.4e-20 102.1 220 42.3
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.3e-19 100.5 188 39.9
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 3.7e-19 99.0 210 41.0
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 4.8e-19 98.6 216 38.4
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.8e-18 96.7 217 40.6
BcaC06g34341 Brassica carinata HOM05D003570 ORTHO05D004207 9.1e-18 94.4 148 41.2
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 5.9e-17 91.7 216 35.2
AT4G05523 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 3.2e-15 85.9 196 38.8
A07p19900 Brassica napus HOM05D003570 ORTHO05D004207 3.2e-15 85.9 179 40.8
A07p18160 Brassica napus HOM05D003570 ORTHO05D004207 8.0e-14 81.3 167 35.9
BraA01t00580Z Brassica rapa HOM05D003570 ORTHO05D004207 8.0e-14 81.3 167 35.9
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 3.3e-12 75.9 217 37.8
BolC4t26878H Brassica oleracea HOM05D003570 ORTHO05D004207 9.7e-12 74.3 196 38.3
BcaC05g25085 Brassica carinata HOM05D003570 ORTHO05D004207 8.2e-11 71.2 180 36.7
C07p30170 Brassica napus HOM05D003570 ORTHO05D004207 2.4e-10 69.7 64 57.8
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 2.4e-10 69.7 194 28.9
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 1.0e-08 64.3 205 29.3
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 1.0e-08 64.3 70 41.4
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 1.3e-08 63.9 77 41.6
Rhsim12G0107900 Rhododendron simsii HOM05D003570 ORTHO05D004207 1.7e-08 63.5 199 26.1
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 2.2e-08 63.2 204 26.5
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 2.2e-08 63.2 97 36.1
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 2.9e-08 62.8 196 25.5
C04p53310 Brassica napus HOM05D003570 ORTHO05D004207 6.5e-08 61.6 185 36.8
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 6.5e-08 61.6 204 25.0
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 6.5e-08 61.6 77 39.0
C03p39130 Brassica napus HOM05D003570 ORTHO05D004207 8.5e-08 61.2 63 52.4
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 8.5e-08 61.2 77 37.7
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 8.5e-08 61.2 77 37.7
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 8.5e-08 61.2 77 37.7
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 8.5e-08 61.2 209 26.3
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 1.9e-07 60.1 70 37.1
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 1.9e-07 60.1 194 28.4
CARHR253470 Cardamine hirsuta HOM05D003570 ORTHO05D004207 2.5e-07 59.7 53 56.6
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 2.5e-07 59.7 77 35.1
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 2.5e-07 59.7 197 25.9
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 2.5e-07 59.7 77 36.4
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 3.2e-07 59.3 77 35.1
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 4.2e-07 58.9 197 23.4
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 5.5e-07 58.5 171 29.2
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 5.5e-07 58.5 171 29.2
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 7.2e-07 58.2 77 36.4
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 7.2e-07 58.2 190 26.8
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 7.2e-07 58.2 77 32.5
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 7.2e-07 58.2 158 25.3
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 7.2e-07 58.2 77 32.5
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 1.2e-06 57.4 77 33.8
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.6e-06 57.0 200 25.5
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 1.6e-06 57.0 77 37.7
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.6e-06 57.0 72 37.5
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 2.1e-06 56.6 80 32.5
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 2.1e-06 56.6 181 26.5
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 2.7e-06 56.2 69 36.2
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 2.7e-06 56.2 80 33.8
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 2.7e-06 56.2 70 32.9
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 3.6e-06 55.8 77 31.2
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 3.6e-06 55.8 80 32.5
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 3.6e-06 55.8 77 36.4
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 4.7e-06 55.5 77 33.8
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 4.7e-06 55.5 77 35.1
Lj3A151T24 Lonicera japonica HOM05D003570 ORTHO05D004207 4.7e-06 55.5 88 29.5
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 6.1e-06 55.1 77 33.8
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 6.1e-06 55.1 69 40.6
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 6.1e-06 55.1 77 37.7
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 8.0e-06 54.7 202 24.3
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 8.0e-06 54.7 198 23.7


User provided reference genes

Program Settings