Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-48 195.7 97 100.0
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 4.9e-48 194.1 97 99.0
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 8.4e-48 193.4 97 99.0
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 1.9e-47 192.2 97 97.9
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 5.6e-44 180.6 90 98.9
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 5.6e-44 180.6 90 98.9
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 5.6e-44 180.6 90 98.9
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 5.6e-44 180.6 90 98.9
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 1.6e-43 179.1 90 96.7
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 1.6e-43 179.1 90 97.8
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 1.6e-43 179.1 90 97.8
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 4.7e-43 177.6 90 97.8
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 1.8e-42 175.6 90 96.7
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 1.5e-33 146.0 72 97.2
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-33 145.6 90 78.9
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 2.1e-30 135.6 90 75.6
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 4.3e-28 127.9 73 87.7
C06p31950 Brassica napus HOM05D004128 ORTHO05D008395 5.1e-21 104.4 55 85.5
BolC6t38322H Brassica oleracea HOM05D004128 ORTHO05D008395 5.1e-21 104.4 55 85.5
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 9.0e-18 93.6 85 52.9
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 9.0e-18 93.6 85 52.9
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 9.0e-18 93.6 85 52.9
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 9.0e-18 93.6 85 52.9
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-17 93.2 85 52.9
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 7.6e-17 90.5 85 51.8
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 1.9e-15 85.9 85 52.9
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 2.5e-15 85.5 85 48.2
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 5.5e-15 84.3 85 51.8
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 5.5e-15 84.3 84 50.0
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-14 82.8 85 51.8
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 1.6e-14 82.8 85 51.8
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 1.6e-14 82.8 85 51.8
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 2.1e-14 82.4 86 47.7
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 2.1e-14 82.4 86 48.8
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 2.1e-14 82.4 85 51.8
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 2.7e-14 82.0 86 48.8
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 2.7e-14 82.0 86 48.8
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 2.7e-14 82.0 85 48.2
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 2.7e-14 82.0 86 48.8
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 3.5e-14 81.6 85 51.8
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 4.6e-14 81.3 85 47.1
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 4.6e-14 81.3 85 47.1
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 4.6e-14 81.3 86 48.8
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 6.0e-14 80.9 86 50.0
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 6.0e-14 80.9 85 50.6
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 7.9e-14 80.5 86 47.7
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 7.9e-14 80.5 85 50.6
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-13 79.7 86 47.7
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-13 79.7 85 49.4
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-13 79.7 86 47.7
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-13 79.7 86 47.7
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 1.8e-13 79.3 85 45.9
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 3.0e-13 78.6 86 47.7
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 3.9e-13 78.2 85 45.9
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 5.1e-13 77.8 85 49.4
BcaB04g19552 Brassica carinata HOM05D004128 ORTHO05D008395 5.1e-13 77.8 76 51.3
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 6.7e-13 77.4 86 46.5
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 8.7e-13 77.0 85 44.7
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 8.7e-13 77.0 86 46.5
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 8.7e-13 77.0 74 52.7
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 8.7e-13 77.0 74 52.7
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 8.7e-13 77.0 74 52.7
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-12 76.3 86 45.3
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-12 76.3 85 47.1
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-12 76.3 86 45.3
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 2.5e-12 75.5 86 46.5
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 4.3e-12 74.7 86 46.5
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 7.4e-12 73.9 99 42.4
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 1.6e-11 72.8 68 57.4
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 2.2e-11 72.4 66 53.0
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 2.8e-11 72.0 56 57.1
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 2.8e-11 72.0 56 57.1
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 4.8e-11 71.2 85 45.9
BolC9t53917H Brassica oleracea HOM05D008062 ORTHO05D011707 3.1e-10 68.6 72 56.9
BraA05t20613Z Brassica rapa HOM05D008062 ORTHO05D008395 3.1e-10 68.6 72 56.9
BraA07t28305Z Brassica rapa HOM05D008062 ORTHO05D011707 3.1e-10 68.6 72 56.9
C03p76590 Brassica napus HOM05D008062 ORTHO05D011707 2.6e-09 65.5 72 54.2
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 3.4e-09 65.1 57 52.6
BraA01t02487Z Brassica rapa HOM05D008062 ORTHO05D008395 4.5e-09 64.7 32 84.4
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 3.8e-08 61.6 74 41.9
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 3.8e-08 61.6 98 35.7
Sp5g20180 Schrenkiella parvula HOM05D004128 ORTHO05D008395 5.0e-08 61.2 63 42.9
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 8.5e-08 60.5 53 49.1
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 1.4e-07 59.7 58 55.2
Sp3g27700 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.4e-07 59.7 58 44.8
Sp7g07830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.9e-07 59.3 84 38.1
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 2.5e-07 58.9 57 49.1
SpUn0012_0140 Schrenkiella parvula HOM05D000286 ORTHO05D008395 3.2e-07 58.5 71 40.8
SpUn0048_0020 Schrenkiella parvula HOM05D041219 ORTHO05D008395 3.2e-07 58.5 58 44.8
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 9.3e-07 57.0 44 52.3
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 1.6e-06 56.2 74 41.9
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 2.7e-06 55.5 59 50.8
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 2.7e-06 55.5 59 50.8


User provided reference genes

Program Settings