Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 9.0e-101 370.2 175 100.0
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 1.2e-100 369.8 175 99.4
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 7.6e-100 367.1 175 99.4
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 2.5e-98 362.1 175 98.3
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 7.1e-98 360.5 175 97.7
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 2.1e-97 359.0 175 94.9
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 7.9e-97 357.1 170 99.4
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 3.2e-90 335.1 170 92.4
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 1.4e-85 319.7 150 100.0
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 3.1e-85 318.5 169 87.6
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 6.9e-85 317.4 175 85.7
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 2.8e-78 295.4 176 81.2
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.4e-77 293.1 177 81.9
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.8e-77 292.7 177 81.9
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 5.3e-77 291.2 176 80.1
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 2.0e-68 262.7 165 75.8
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 3.5e-68 261.9 198 65.2
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 1.4e-61 240.0 147 74.1
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 5.9e-60 234.6 142 77.5
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 7.7e-60 234.2 136 76.5
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 2.9e-59 232.3 160 69.4
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 5.0e-59 231.5 165 66.7
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 8.5e-59 230.7 161 67.1
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 1.1e-58 230.3 138 73.9
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 4.2e-58 228.4 153 68.6
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 4.2e-58 228.4 168 64.3
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 4.2e-58 228.4 171 66.7
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 7.2e-58 227.6 154 69.5
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 9.4e-58 227.3 159 67.9
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 9.4e-58 227.3 141 73.0
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 1.2e-57 226.9 172 63.4
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 1.2e-57 226.9 152 71.1
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 1.2e-57 226.9 150 68.0
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 1.6e-57 226.5 138 74.6
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 2.1e-57 226.1 139 72.7
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 6.1e-57 224.6 166 63.3
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 8.0e-57 224.2 148 70.9
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 1.0e-56 223.8 150 66.0
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.0e-56 223.8 173 61.3
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 1.8e-56 223.0 133 72.9
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 1.8e-56 223.0 140 70.0
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 2.3e-56 222.6 156 65.4
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 2.3e-56 222.6 139 72.7
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 3.0e-56 222.2 124 79.0
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 3.0e-56 222.2 163 66.3
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 4.0e-56 221.9 165 65.5
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 1.2e-55 220.3 166 62.7
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 2.0e-55 219.5 130 76.9
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 2.0e-55 219.5 162 63.6
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 2.0e-55 219.5 162 63.6
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 2.6e-55 219.2 133 73.7
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 4.4e-55 218.4 146 70.5
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 4.4e-55 218.4 156 62.8
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 4.4e-55 218.4 131 72.5
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 5.7e-55 218.0 166 63.3
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 9.8e-55 217.2 146 70.5
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 1.3e-54 216.9 131 72.5
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.3e-54 216.9 130 75.4
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.3e-54 216.9 130 75.4
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 2.2e-54 216.1 136 69.1
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 3.7e-54 215.3 154 66.2
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 4.8e-54 214.9 138 71.7
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 4.8e-54 214.9 141 70.9
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 1.1e-53 213.8 162 62.3
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 1.4e-53 213.4 145 66.2
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 1.2e-52 210.3 132 70.5
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 1.7e-51 206.5 118 78.8
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 2.2e-51 206.1 162 61.7
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 5.0e-51 204.9 207 53.1
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 6.5e-51 204.5 154 62.3
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 1.1e-50 203.8 141 66.0
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 1.9e-50 203.0 136 68.4
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 1.9e-50 203.0 166 58.4
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 1.2e-49 200.3 134 67.2
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 3.6e-49 198.7 157 61.8
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 6.1e-49 198.0 143 60.8
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 6.1e-49 198.0 130 66.9
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 6.1e-49 198.0 107 78.5
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.4e-48 196.8 182 52.7
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 1.8e-48 196.4 105 80.0
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.2e-47 193.7 141 59.6
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 1.2e-47 193.7 103 80.6
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 2.8e-46 189.1 103 76.7
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 8.3e-46 187.6 105 75.2
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 3.1e-45 185.7 124 66.1
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 1.6e-44 183.3 130 66.2
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 1.2e-39 167.2 155 52.3
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 9.8e-39 164.1 110 67.3
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 9.8e-39 164.1 91 72.5
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 3.7e-38 162.2 116 62.9
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 1.3e-35 153.7 119 58.8
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 2.3e-35 152.9 94 66.0
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 1.0e-32 144.1 89 66.3
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 2.3e-32 142.9 112 56.2
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 5.2e-32 141.7 104 63.5
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 1.4e-29 133.7 156 46.2
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 1.9e-29 133.3 123 52.0
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 1.9e-26 123.2 131 48.1
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 9.5e-26 120.9 89 55.1
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 2.8e-25 119.4 89 52.8
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 1.8e-24 116.7 129 46.5
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 6.8e-24 114.8 68 72.1
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 1.5e-23 113.6 58 81.0
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 1.3e-22 110.5 110 53.6
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 3.6e-17 92.4 88 45.5
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 6.0e-12 75.1 102 39.2


User provided reference genes

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