Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p45690 Brassica napus HOM05D012648 ORTHO05D015002 5.9e-45 183.7 86 100.0
BraA02t07895Z Brassica rapa HOM05D012648 ORTHO05D015002 5.9e-45 183.7 86 100.0
A02p28580 Brassica napus HOM05D012648 ORTHO05D015002 2.9e-44 181.4 86 98.8
A06p07130 Brassica napus HOM05D012648 ORTHO05D015002 1.2e-18 96.3 85 55.3
C05p08670 Brassica napus HOM05D012648 ORTHO05D015002 1.2e-18 96.3 85 55.3
BolC5t29616H Brassica oleracea HOM05D012648 ORTHO05D015002 1.2e-18 96.3 85 55.3
BraA06t23929Z Brassica rapa HOM05D012648 ORTHO05D015002 1.2e-18 96.3 85 55.3
C05p08780 Brassica napus HOM05D012648 ORTHO05D015002 2.7e-18 95.1 83 57.8
C05p59530 Brassica napus HOM05D012648 ORTHO05D015002 1.8e-17 92.4 99 50.5
BolC5t29621H Brassica oleracea HOM05D012648 ORTHO05D015002 3.0e-17 91.7 97 49.5
A06p07260 Brassica napus HOM05D012648 ORTHO05D015002 4.0e-17 91.3 98 49.0
BraA06t23932Z Brassica rapa HOM05D012648 ORTHO05D015002 4.0e-17 91.3 98 49.0
C05p08710 Brassica napus HOM05D012648 ORTHO05D015002 5.2e-17 90.9 97 48.5
C06p49290 Brassica napus HOM05D008777 ORTHO05D010940 9.1e-14 80.1 86 51.2
BolC6t39964H Brassica oleracea HOM05D008777 ORTHO05D010940 3.5e-13 78.2 86 50.0
AL3G14480 Arabidopsis lyrata HOM05D008777 ORTHO05D010940 4.5e-13 77.8 79 51.9
C06p49280 Brassica napus HOM05D008777 ORTHO05D010940 7.7e-13 77.0 85 48.2
BolC6t39963H Brassica oleracea HOM05D008777 ORTHO05D010940 7.7e-13 77.0 85 48.2
CARHR078660 Cardamine hirsuta HOM05D008777 ORTHO05D010940 4.2e-11 71.2 85 42.4
Carub.0006s1754 Capsella rubella HOM05D008777 ORTHO05D010940 1.2e-10 69.7 85 42.4
Sp1g08900 Schrenkiella parvula HOM05D008777 ORTHO05D010940 1.6e-10 69.3 84 47.6
A08p34050 Brassica napus HOM05D008777 ORTHO05D010940 2.1e-10 68.9 84 48.8
C03p53690 Brassica napus HOM05D008777 ORTHO05D010940 3.6e-10 68.2 84 40.5
BolC3t17629H Brassica oleracea HOM05D008777 ORTHO05D010940 3.6e-10 68.2 84 40.5
AT5G19172 Arabidopsis thaliana HOM05D008777 ORTHO05D010940 6.1e-10 67.4 87 43.7
C08p13570 Brassica napus HOM05D008777 ORTHO05D010940 6.1e-10 67.4 84 47.6
BolC8t48994H Brassica oleracea HOM05D008777 ORTHO05D010940 6.1e-10 67.4 84 47.6
BolC8t48997H Brassica oleracea HOM05D008777 ORTHO05D010940 6.1e-10 67.4 84 47.6
AT3G04545 Arabidopsis thaliana HOM05D013515 ORTHO05D015351 8.0e-10 67.0 84 46.4
CARHR078720 Cardamine hirsuta HOM05D013515 ORTHO05D015351 1.5e-08 62.8 86 43.0
Carub.0003s2387 Capsella rubella HOM05D008777 ORTHO05D010940 2.0e-08 62.4 87 48.3
AT5G19175 Arabidopsis thaliana HOM05D008777 ORTHO05D010940 2.6e-08 62.0 81 42.0
C09p06090 Brassica napus HOM05D008777 ORTHO05D010940 7.5e-08 60.5 88 38.6
C09p06100 Brassica napus HOM05D008777 ORTHO05D010940 7.5e-08 60.5 88 38.6
C09p06110 Brassica napus HOM05D008777 ORTHO05D010940 7.5e-08 60.5 88 38.6
CARHR149470 Cardamine hirsuta HOM05D008777 ORTHO05D010940 2.2e-07 58.9 70 45.7
BolC5t29596H Brassica oleracea HOM05D008777 ORTHO05D010940 3.7e-07 58.2 84 41.7
CARHR261380 Cardamine hirsuta HOM05D013515 ORTHO05D015351 3.7e-07 58.2 83 43.4
C06p49270 Brassica napus HOM05D008777 ORTHO05D010940 4.9e-07 57.8 88 38.6
BolC6t39962H Brassica oleracea HOM05D008777 ORTHO05D010940 4.9e-07 57.8 88 38.6
Carub.0003s1387 Capsella rubella HOM05D010148 ORTHO05D012316 1.1e-06 56.6 85 37.6
Carub.0003s1385 Capsella rubella HOM05D010148 ORTHO05D012316 1.8e-06 55.8 85 37.6
AT3G04540 Arabidopsis thaliana HOM05D013515 ORTHO05D015351 2.4e-06 55.5 82 40.2
CARHR078680 Cardamine hirsuta HOM05D008777 ORTHO05D010940 2.4e-06 55.5 69 42.0
AL3G14560 Arabidopsis lyrata HOM05D013515 ORTHO05D015351 3.1e-06 55.1 82 40.2
BraA08t35317Z Brassica rapa HOM05D008777 ORTHO05D010940 4.1e-06 54.7 84 44.0
Carub.0005s0310 Capsella rubella HOM05D010588 ORTHO05D012793 4.1e-06 54.7 82 41.5
AT1G32763 Arabidopsis thaliana HOM05D013515 ORTHO05D015351 5.4e-06 54.3 82 39.0
Carub.0003s1667 Capsella rubella HOM05D008777 ORTHO05D010940 7.0e-06 53.9 83 41.0


User provided reference genes

Program Settings