Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p45650 Brassica napus HOM05D027276 ORTHO05D024192 3.4e-65 251.5 127 100.0
C02p45750 Brassica napus HOM05D027276 ORTHO05D024192 9.2e-55 216.9 129 88.4
BolC2t10636H Brassica oleracea HOM05D027276 ORTHO05D024192 4.6e-54 214.5 129 87.6
BcaC03g16719 Brassica carinata HOM05D027276 ORTHO05D024192 3.0e-53 211.8 131 87.0
A07p22770 Brassica napus HOM05D000313 ORTHO05D024192 1.4e-23 113.2 81 75.3
BcaC01g00428 Brassica carinata HOM05D007198 ORTHO05D008969 1.9e-07 59.7 35 88.6
CARHR245490 Cardamine hirsuta HOM05D007198 ORTHO05D008969 1.9e-07 59.7 35 88.6
Sp7g34740 Schrenkiella parvula HOM05D007198 ORTHO05D008969 1.9e-07 59.7 35 88.6
AL7G13790 Arabidopsis lyrata HOM05D007198 ORTHO05D008969 2.5e-07 59.3 35 85.7
BcaB03g12356 Brassica carinata HOM05D007198 ORTHO05D008969 2.5e-07 59.3 35 85.7
AT4G37020 Arabidopsis thaliana HOM05D007198 ORTHO05D008969 3.2e-07 58.9 35 85.7
Carub.0007s0322 Capsella rubella HOM05D007198 ORTHO05D008969 3.2e-07 58.9 35 85.7
Thhalv10026229m.g Eutrema salsugineum HOM05D007198 ORTHO05D008969 4.2e-07 58.5 35 88.6
BolC3t20215H Brassica oleracea HOM05D007198 ORTHO05D008969 1.2e-06 57.0 34 82.4
BraA08t34210Z Brassica rapa HOM05D007198 ORTHO05D008969 1.2e-06 57.0 34 82.4
Aa31LG6G13950 Aethionema arabicum HOM05D007198 ORTHO05D008969 1.6e-06 56.6 34 82.4
FAN19G3022 Fragaria x ananassa HOM05D007198 ORTHO05D008969 4.7e-06 55.1 56 55.4
CDE04G0918 Ceratophyllum demersum HOM05D007198 ORTHO05D008969 6.1e-06 54.7 35 74.3
Duzib264G0904 Durio zibethinus HOM05D007198 ORTHO05D008969 6.1e-06 54.7 34 82.4
Gohir.A12G069000 Gossypium hirsutum HOM05D007198 ORTHO05D008969 6.1e-06 54.7 34 82.4
Potri.007G043200 Populus trichocarpa HOM05D007198 ORTHO05D008969 6.1e-06 54.7 34 79.4
QL06p041746 Quercus lobata HOM05D007198 ORTHO05D008969 6.1e-06 54.7 34 79.4
Dinv33647 Davidia involucrata HOM05D000877 ORTHO05D001509 7.9e-06 54.3 34 67.6
Manes.12G101406 Manihot esculenta HOM05D007198 ORTHO05D008969 7.9e-06 54.3 34 79.4
Nn5g30749 Nelumbo nucifera HOM05D000877 ORTHO05D001509 7.9e-06 54.3 34 67.6
SMO198G0016 Selaginella moellendorffii HOM05D000877 ORTHO05D001509 7.9e-06 54.3 62 48.4


User provided reference genes

Program Settings