Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p45380 Brassica napus HOM05D001825 ORTHO05D010533 1.8e-90 335.9 166 100.0
A03p65620 Brassica napus HOM05D001825 ORTHO05D010533 2.2e-40 169.5 109 79.8
BraA03t15615Z Brassica rapa HOM05D001825 ORTHO05D010533 2.2e-40 169.5 109 79.8
A07p43620 Brassica napus HOM05D001825 ORTHO05D010533 2.1e-30 136.3 88 79.5
BcaC04g19385 Brassica carinata HOM05D001825 ORTHO05D010533 6.0e-30 134.8 86 80.2
C09p56270 Brassica napus HOM05D001825 ORTHO05D010533 6.0e-30 134.8 86 80.2
BolC9t58496H Brassica oleracea HOM05D001825 ORTHO05D010533 6.0e-30 134.8 86 80.2
BolC3t13444H Brassica oleracea HOM05D004575 ORTHO05D010533 1.9e-28 129.8 121 61.2
A01p23900 Brassica napus HOM05D001825 ORTHO05D010533 3.3e-20 102.4 66 78.8
BraA03t12003Z Brassica rapa HOM05D001825 ORTHO05D010533 3.3e-20 102.4 66 78.8
C05p24940 Brassica napus HOM05D001825 ORTHO05D004551 6.9e-18 94.7 67 71.6
SalBow8G2594 Salvia bowleyana HOM05D001825 ORTHO05D002336 4.5e-17 92.0 67 68.7
Hma1.2p1_0030F.1_g018230 Hydrangea macrophylla HOM05D001825 ORTHO05D002336 2.2e-16 89.7 67 62.7
HanXRQChr07g0188451 Helianthus annuus HOM05D000882 ORTHO05D001142 2.9e-16 89.4 76 59.2
arahy.Tifrunner.gnm1.ann1.9V29BW Arachis hypogaea HOM05D001825 ORTHO05D002336 3.8e-16 89.0 72 62.5
BcaC06g35196 Brassica carinata HOM05D001825 ORTHO05D002336 5.0e-16 88.6 66 68.2
BolC7t42385H Brassica oleracea HOM05D001825 ORTHO05D002336 6.5e-16 88.2 68 66.2
Carub.0135s0002 Capsella rubella HOM05D001825 ORTHO05D002336 8.5e-16 87.8 67 61.2
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 1.9e-15 86.7 67 59.7
BraA09t38092Z Brassica rapa HOM05D001825 ORTHO05D010533 1.2e-14 84.0 67 59.7
RcHm_v2.0_Chr4g0434251 Rosa chinensis HOM05D001825 ORTHO05D010533 1.2e-14 84.0 66 59.1
A09p25040 Brassica napus HOM05D001825 ORTHO05D010533 2.1e-14 83.2 67 59.7
RcHm_v2.0_Chr1g0316561 Rosa chinensis HOM05D001825 ORTHO05D010533 3.6e-14 82.4 66 57.6
RcHm_v2.0_Chr4g0401841 Rosa chinensis HOM05D001825 ORTHO05D010533 3.6e-14 82.4 66 57.6
A07p12640 Brassica napus HOM05D001825 ORTHO05D002336 1.0e-13 80.9 61 67.2
BraA07t29042Z Brassica rapa HOM05D001825 ORTHO05D002336 1.0e-13 80.9 61 67.2
RcHm_v2.0_Chr5g0039511 Rosa chinensis HOM05D001825 ORTHO05D010533 1.4e-13 80.5 66 57.6
RcHm_v2.0_Chr7g0238001 Rosa chinensis HOM05D001825 ORTHO05D010533 1.4e-13 80.5 66 57.6
arahy.Tifrunner.gnm1.ann1.I3PUBY Arachis hypogaea HOM05D001825 ORTHO05D002336 3.0e-13 79.3 91 47.3
Ah.02g115330 Amaranthus hybridus HOM05D001825 ORTHO05D002336 3.9e-13 79.0 55 65.5
ECA234G2809 Erigeron canadensis HOM05D001825 ORTHO05D010533 3.9e-13 79.0 59 66.1
BraA08t34646Z Brassica rapa HOM05D001825 ORTHO05D002336 8.8e-13 77.8 57 68.4
C03p72890 Brassica napus HOM05D001825 ORTHO05D010533 5.7e-12 75.1 56 67.9
RcHm_v2.0_Chr1g0328271 Rosa chinensis HOM05D001825 ORTHO05D010533 5.7e-12 75.1 51 66.7
Haze_18656 Corylus avellana HOM05D001825 ORTHO05D002336 3.7e-11 72.4 118 38.1
Solyc05g045950.3 Solanum lycopersicum HOM05D001825 ORTHO05D010533 3.7e-11 72.4 53 66.0
SMO144G0049 Selaginella moellendorffii HOM05D001825 ORTHO05D002336 1.1e-10 70.9 51 62.7
DCAR_023674 Daucus carota HOM05D001825 ORTHO05D002336 4.5e-09 65.5 90 41.1
Manes.14G099600 Manihot esculenta HOM05D001825 ORTHO05D002336 1.3e-08 63.9 53 56.6
A09p39520 Brassica napus HOM05D001825 ORTHO05D004551 1.7e-08 63.5 45 71.1
BcaC03g16707 Brassica carinata HOM05D001825 ORTHO05D010533 1.1e-07 60.8 41 73.2
PGR119G2353 Punica granatum HOM05D001825 ORTHO05D002336 1.9e-07 60.1 53 52.8
C09p32040 Brassica napus HOM05D001825 ORTHO05D010533 5.5e-07 58.5 47 55.3
BolC9t56056H Brassica oleracea HOM05D001825 ORTHO05D010533 5.5e-07 58.5 47 55.3
PRCOL_00003010 Prasinoderma coloniale HOM05D001825 ORTHO05D002336 1.2e-06 57.4 64 42.2
Lalb_Chr10g0099901 Lupinus albus HOM05D001825 ORTHO05D010533 1.6e-06 57.0 30 83.3
HanXRQChr12g0384181 Helianthus annuus HOM05D001825 ORTHO05D010533 3.6e-06 55.8 48 60.4


User provided reference genes

Program Settings