Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p44910 Brassica napus HOM05D003630 ORTHO05D004151 1.5e-65 252.7 123 100.0
BolC2t10526H Brassica oleracea HOM05D003630 ORTHO05D004151 1.7e-61 239.2 115 100.0
BraA02t07868Z Brassica rapa HOM05D003630 ORTHO05D004151 4.9e-61 237.7 115 99.1
A02p28330 Brassica napus HOM05D003630 ORTHO05D004151 5.6e-57 224.2 115 93.0
Sp2g09130 Schrenkiella parvula HOM05D003630 ORTHO05D004151 3.6e-56 221.5 115 90.4
BcaC03g16649 Brassica carinata HOM05D003630 ORTHO05D004151 9.0e-55 216.9 103 100.0
Thhalv10003427m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 1.5e-54 216.1 115 91.3
AL8G15690 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 2.6e-54 215.3 115 89.6
AT5G44300 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 4.4e-54 214.5 115 89.6
Carub.0008s0422 Capsella rubella HOM05D003630 ORTHO05D004151 7.1e-52 207.2 115 87.8
Aa31LG9G8870 Aethionema arabicum HOM05D003630 ORTHO05D004151 9.0e-47 190.3 115 78.3
BcaB07g30534 Brassica carinata HOM05D003630 ORTHO05D004151 1.5e-46 189.5 99 90.9
CARHR178890 Cardamine hirsuta HOM05D003630 ORTHO05D004151 2.7e-43 178.7 120 77.5
Aa31LG9G7730 Aethionema arabicum HOM05D003630 ORTHO05D004151 5.8e-30 134.4 83 78.3
AT2G33830 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 6.5e-29 131.0 109 58.7
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 6.5e-29 131.0 120 59.2
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 6.5e-29 131.0 130 55.4
BcaB01g03917 Brassica carinata HOM05D003630 ORTHO05D004151 1.1e-28 130.2 110 55.5
BcaC01g05821 Brassica carinata HOM05D003630 ORTHO05D004151 1.1e-28 130.2 110 55.5
BcaC01g05822 Brassica carinata HOM05D003630 ORTHO05D004151 1.1e-28 130.2 110 55.5
A03p18920 Brassica napus HOM05D003630 ORTHO05D004151 1.1e-28 130.2 110 55.5
BraA03t11151Z Brassica rapa HOM05D003630 ORTHO05D004151 1.1e-28 130.2 110 55.5
Carub.0004s1550 Capsella rubella HOM05D003630 ORTHO05D004151 1.1e-28 130.2 110 56.4
C04p15210 Brassica napus HOM05D003630 ORTHO05D004151 1.9e-28 129.4 110 58.2
BolC4t23094H Brassica oleracea HOM05D003630 ORTHO05D004151 1.9e-28 129.4 110 58.2
BcaC02g11461 Brassica carinata HOM05D003630 ORTHO05D004151 2.5e-28 129.0 110 58.2
Sp4g16220 Schrenkiella parvula HOM05D003630 ORTHO05D004151 2.5e-28 129.0 110 55.5
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 3.2e-28 128.6 114 59.6
BcaB02g10597 Brassica carinata HOM05D003630 ORTHO05D004151 4.2e-28 128.3 110 57.3
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 4.2e-28 128.3 120 58.3
Aa31sc652G110 Aethionema arabicum HOM05D003630 ORTHO05D004151 5.5e-28 127.9 111 58.6
Aa31sc652G20 Aethionema arabicum HOM05D003630 ORTHO05D004151 5.5e-28 127.9 111 58.6
A05p11750 Brassica napus HOM05D003630 ORTHO05D004151 5.5e-28 127.9 110 57.3
BraA05t20119Z Brassica rapa HOM05D003630 ORTHO05D004151 5.5e-28 127.9 110 57.3
BolC3t14590H Brassica oleracea HOM05D003630 ORTHO05D004151 7.1e-28 127.5 110 56.4
AL4G29600 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 9.3e-28 127.1 108 55.6
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.6e-27 126.3 124 56.5
PGSC0003DMG400029732 Solanum tuberosum HOM05D003630 ORTHO05D004151 4.6e-27 124.8 120 54.2
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 6.0e-27 124.4 120 52.5
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 7.9e-27 124.0 123 53.7
Peaxi162Scf01100g00009 Petunia axillaris HOM05D003630 ORTHO05D004151 1.8e-26 122.9 120 49.2
Sed0001316 Sechium edule HOM05D003630 ORTHO05D004151 1.8e-26 122.9 114 58.8
Solyc02g077880.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 1.8e-26 122.9 121 52.9
Sopen02g022730 Solanum pennellii HOM05D003630 ORTHO05D004151 1.8e-26 122.9 121 52.9
CARHR127940 Cardamine hirsuta HOM05D003630 ORTHO05D004151 2.3e-26 122.5 108 56.5
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 3.0e-26 122.1 122 54.9
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 3.0e-26 122.1 116 56.0
CsaV3_1G012460 Cucumis sativus L. HOM05D003630 ORTHO05D004151 3.9e-26 121.7 114 57.0
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 3.9e-26 121.7 125 52.8
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 3.9e-26 121.7 125 53.6
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 6.7e-26 120.9 126 51.6
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 6.7e-26 120.9 130 52.3
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 8.7e-26 120.6 119 56.3
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.1e-25 120.2 106 59.4
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 1.1e-25 120.2 119 56.3
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 1.1e-25 120.2 119 56.3
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 1.9e-25 119.4 127 53.5
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 1.9e-25 119.4 122 55.7
Thhalv10017461m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 2.5e-25 119.0 110 51.8
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 3.3e-25 118.6 120 50.8
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 3.3e-25 118.6 122 54.9
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 4.3e-25 118.2 120 56.7
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 4.3e-25 118.2 120 54.2
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 4.3e-25 118.2 116 54.3
MELO3C002620.2 Cucumis melo HOM05D003630 ORTHO05D004151 7.4e-25 117.5 114 55.3
Nitab4.5_0003487g0100 Nicotiana tabacum HOM05D003630 ORTHO05D004151 7.4e-25 117.5 127 50.4
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 1.3e-24 116.7 116 56.9
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 1.6e-24 116.3 127 52.0
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 1.6e-24 116.3 120 49.2
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 1.6e-24 116.3 127 51.2
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 2.2e-24 115.9 126 49.2
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 2.8e-24 115.5 119 53.8
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 2.8e-24 115.5 118 55.1
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 2.8e-24 115.5 131 49.6
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 3.7e-24 115.2 123 52.0
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 3.7e-24 115.2 118 55.1
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 3.7e-24 115.2 122 53.3
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 4.8e-24 114.8 121 52.9
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 4.8e-24 114.8 112 53.6
Actinidia07592 Actinidia chinensis HOM05D003630 ORTHO05D004151 6.3e-24 114.4 124 50.8
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 6.3e-24 114.4 123 52.8
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 6.3e-24 114.4 125 51.2
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.4e-23 113.2 116 56.0
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.4e-23 113.2 116 56.0
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 1.4e-23 113.2 125 50.4
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 1.4e-23 113.2 123 53.7
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 3.1e-23 112.1 121 50.4
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 3.1e-23 112.1 128 47.7
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 4.1e-23 111.7 122 50.8
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 5.3e-23 111.3 123 54.5
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 5.3e-23 111.3 122 50.0
C03p22060 Brassica napus HOM05D003630 ORTHO05D004151 6.9e-23 110.9 98 55.1
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 6.9e-23 110.9 127 47.2
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 6.9e-23 110.9 122 53.3
Solyc03g006360.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 6.9e-23 110.9 134 46.3
TPR.G16501 Trifolium pratense HOM05D003630 ORTHO05D004151 6.9e-23 110.9 123 53.7
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 1.2e-22 110.2 122 53.3
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 1.5e-22 109.8 125 53.6
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 2.0e-22 109.4 120 49.2
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 2.6e-22 109.0 116 52.6
unitig_749.g13657 Utricularia gibba HOM05D003630 ORTHO05D004151 2.6e-22 109.0 121 50.4
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 4.5e-22 108.2 120 50.0
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 4.5e-22 108.2 112 52.7
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 4.5e-22 108.2 127 50.4
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 4.5e-22 108.2 121 47.9
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 4.5e-22 108.2 117 53.0
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 7.6e-22 107.5 126 47.6
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 7.6e-22 107.5 120 51.7
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 7.6e-22 107.5 113 53.1
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 1.0e-21 107.1 122 50.8
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 1.0e-21 107.1 128 50.8
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 1.0e-21 107.1 126 49.2
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 1.0e-21 107.1 110 54.5
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 1.0e-21 107.1 123 49.6
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 1.0e-21 107.1 127 48.0
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 1.0e-21 107.1 117 50.4
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.2e-21 105.9 116 50.9
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.2e-21 105.9 116 50.9
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 3.8e-21 105.1 119 47.9
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 3.8e-21 105.1 109 54.1
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 6.5e-21 104.4 121 48.8
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 6.5e-21 104.4 119 49.6
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 6.5e-21 104.4 119 49.6
Medtr2g014240 Medicago truncatula HOM05D003630 ORTHO05D004151 6.5e-21 104.4 123 51.2
EL10Ac8g20421 Beta vulgaris HOM05D003630 ORTHO05D004151 8.5e-21 104.0 129 48.1
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 8.5e-21 104.0 108 51.9
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 8.5e-21 104.0 111 51.4
CAN.G529.26 Capsicum annuum HOM05D003630 ORTHO05D004151 8.5e-21 104.0 67 70.1
FAN21G0750 Fragaria x ananassa HOM05D003630 ORTHO05D004151 8.5e-21 104.0 119 49.6
HanXRQChr04g0123791 Helianthus annuus HOM05D003630 ORTHO05D004151 8.5e-21 104.0 114 48.2
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 8.5e-21 104.0 112 52.7
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 1.1e-20 103.6 125 52.0
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 1.1e-20 103.6 124 47.6
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 2.5e-20 102.4 122 45.9
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 2.5e-20 102.4 122 45.9
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 2.5e-20 102.4 120 50.8
Lsat_1_v5_gn_1_124360 Lactuca sativa HOM05D003630 ORTHO05D004151 3.2e-20 102.1 104 53.8
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 3.2e-20 102.1 124 48.4
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 4.2e-20 101.7 121 49.6
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 4.2e-20 101.7 124 48.4
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 7.2e-20 100.9 111 54.1
Gorai.009G167500 Gossypium raimondii HOM05D003630 ORTHO05D004151 7.2e-20 100.9 101 56.4
Os11g0671000 Oryza sativa ssp. japonica HOM05D003630 ORTHO05D004151 7.2e-20 100.9 129 45.0
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 9.3e-20 100.5 123 48.0
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 1.2e-19 100.1 121 43.8
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 1.2e-19 100.1 122 48.4
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 1.6e-19 99.8 128 46.9
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 2.1e-19 99.4 118 45.8
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 7.9e-19 97.4 118 44.1
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 1.0e-18 97.1 112 50.9
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 1.4e-18 96.7 106 50.9
Rhsim02G0132700 Rhododendron simsii HOM05D003630 ORTHO05D004151 1.4e-18 96.7 118 49.2
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 1.8e-18 96.3 111 50.5
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 2.3e-18 95.9 110 48.2
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 2.3e-18 95.9 110 48.2
DCAR_003387 Daucus carota HOM05D003630 ORTHO05D004151 2.3e-18 95.9 123 44.7
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 2.3e-18 95.9 106 53.8
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 2.3e-18 95.9 109 50.5
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 3.0e-18 95.5 139 46.0
HanXRQChr01g0003821 Helianthus annuus HOM05D003630 ORTHO05D004151 5.1e-18 94.7 117 42.7
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 5.1e-18 94.7 110 44.5
Sopen03g002370 Solanum pennellii HOM05D003630 ORTHO05D004151 5.1e-18 94.7 122 43.4
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 1.1e-17 93.6 126 46.0
DCAR_008021 Daucus carota HOM05D003630 ORTHO05D004151 2.5e-17 92.4 126 45.2
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 1.3e-16 90.1 115 46.1
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 1.7e-16 89.7 111 50.5
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 2.2e-16 89.4 114 50.0
PSO675G3190 Papaver somniferum HOM05D003630 ORTHO05D004151 2.8e-16 89.0 125 42.4
Sabra04G0029500 Salix brachista HOM05D003630 ORTHO05D004151 6.3e-16 87.8 110 44.5
Sed0007569 Sechium edule HOM05D003630 ORTHO05D004151 5.3e-15 84.7 100 50.0
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 4.5e-14 81.6 151 37.7
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 5.0e-13 78.2 96 46.9
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 7.2e-12 74.3 145 34.5
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 7.2e-12 74.3 159 35.2
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 1.6e-11 73.2 119 42.0
Sc17g0006070 Simmondsia chinensis HOM05D003630 ORTHO05D004151 2.1e-11 72.8 112 37.5
ECA248G1596 Erigeron canadensis HOM05D000885 ORTHO05D008875 1.4e-10 70.1 76 51.3
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 1.1e-09 67.0 152 34.9
Pp3c24_1050 Physcomitrium patens HOM05D003630 ORTHO05D004151 3.1e-07 58.9 157 33.1
Nn8g38544 Nelumbo nucifera HOM05D002144 ORTHO05D002170 7.7e-06 54.3 133 32.3


User provided reference genes

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