Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 2.7e-233 811.6 399 100.0
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 2.1e-230 802.0 399 98.7
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 6.4e-227 790.4 399 97.7
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 1.9e-207 725.7 384 93.2
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 8.1e-206 720.3 399 88.7
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 3.6e-198 694.9 345 99.4
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 4.8e-198 694.5 399 86.2
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 4.0e-189 664.8 397 83.6
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 1.3e-179 633.3 399 78.7
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 7.4e-175 617.5 396 78.5
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 4.1e-165 585.1 399 72.4
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 3.7e-150 535.4 394 66.5
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 2.3e-136 489.6 321 75.7
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 4.8e-134 481.9 390 61.0
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 3.1e-133 479.2 390 60.3
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 4.1e-133 478.8 390 60.8
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 8.5e-131 471.1 393 59.8
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 2.5e-130 469.5 389 60.4
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 1.8e-128 463.4 393 58.5
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 8.8e-128 461.1 389 58.9
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 7.5e-127 458.0 399 56.6
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.7e-126 456.8 393 57.5
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 3.7e-126 455.7 399 58.9
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 3.1e-125 452.6 388 60.1
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 1.3e-123 447.2 397 57.7
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 2.3e-123 446.4 390 56.9
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 8.6e-123 444.5 402 55.5
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 1.9e-122 443.4 387 58.4
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 1.2e-121 440.7 390 57.4
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 1.2e-121 440.7 397 56.7
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 3.6e-121 439.1 402 55.7
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 8.0e-121 438.0 386 56.0
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 4.0e-120 435.6 394 56.9
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 6.8e-120 434.9 402 54.0
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 2.6e-119 433.0 398 56.8
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 2.2e-118 429.9 406 53.9
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 8.3e-118 427.9 401 53.6
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 8.3e-118 427.9 400 53.5
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 7.0e-117 424.9 396 55.3
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 1.2e-116 424.1 386 54.9
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 3.5e-116 422.5 379 54.9
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 3.5e-116 422.5 386 54.9
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 3.9e-115 419.1 395 54.7
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 6.6e-115 418.3 390 54.4
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 6.6e-115 418.3 386 56.0
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 1.1e-114 417.5 393 53.2
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 1.9e-114 416.8 386 55.4
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 1.2e-113 414.1 345 58.6
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 2.1e-113 413.3 396 54.0
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 2.1e-113 413.3 398 53.0
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 3.6e-113 412.5 386 54.4
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 6.8e-112 408.3 393 54.2
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 8.9e-112 407.9 398 51.5
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 8.9e-112 407.9 364 56.0
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 1.5e-111 407.1 386 53.9
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 4.4e-111 405.6 341 59.8
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 7.5e-111 404.8 396 53.0
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 2.2e-110 403.3 390 52.8
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 2.2e-110 403.3 387 52.7
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 1.9e-109 400.2 390 50.5
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 3.2e-109 399.4 395 50.4
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 5.4e-109 398.7 392 53.1
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 1.6e-108 397.1 397 49.9
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 1.0e-107 394.4 407 51.1
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 2.3e-107 393.3 387 51.9
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 3.9e-107 392.5 389 50.9
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 3.9e-107 392.5 391 49.9
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 2.5e-106 389.8 393 51.1
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 4.3e-106 389.0 393 50.4
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 5.6e-106 388.7 386 50.0
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 6.2e-105 385.2 318 60.4
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 2.3e-104 383.3 342 54.1
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 4.4e-103 379.0 393 48.6
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 9.8e-103 377.9 345 54.5
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 1.7e-102 377.1 390 50.8
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 5.4e-101 372.1 385 48.6
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 2.7e-100 369.8 359 51.3
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 7.3e-98 361.7 386 50.0
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 1.2e-97 360.9 323 58.5
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 6.8e-96 355.1 352 51.4
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 6.4e-94 348.6 321 54.8
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.4e-93 347.4 387 49.6
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 3.5e-92 342.8 391 48.8
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 2.3e-91 340.1 428 41.6
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 3.3e-90 336.3 218 76.1
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 1.8e-88 330.5 297 56.6
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 2.0e-87 327.0 336 51.5
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 6.9e-80 302.0 394 43.1
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 7.1e-77 292.0 238 60.5
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 9.3e-77 291.6 267 55.8
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 6.0e-76 288.9 392 39.8
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 1.7e-75 287.3 294 48.6
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 2.5e-74 283.5 295 49.2
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 7.4e-74 282.0 279 49.1
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 3.2e-69 266.5 269 52.8
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 1.1e-61 241.5 234 54.3
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 5.0e-54 216.1 231 49.8
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 4.3e-50 203.0 219 47.5
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 2.4e-48 197.2 395 34.2
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 2.1e-44 184.1 206 45.1
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 1.1e-42 178.3 354 32.8
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.3e-41 174.9 280 35.4
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 9.4e-37 158.7 278 35.6
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 2.9e-30 137.1 99 67.7
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 1.8e-27 127.9 237 35.4
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 5.9e-23 112.8 134 47.0
RcHm_v2.0_Chr4g0424981 Rosa chinensis HOM05D007013 ORTHO05D008999 4.4e-18 96.7 91 50.5
Zm00001eb030810 Zea mays HOM05D007013 ORTHO05D008999 6.1e-12 76.3 97 42.3
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 1.3e-09 68.6 102 37.3
MELO3C025412.2 Cucumis melo HOM05D007013 ORTHO05D029173 4.5e-07 60.1 57 50.9
MELO3C029988.2 Cucumis melo HOM05D007013 ORTHO05D029173 7.7e-07 59.3 58 50.0
SEGI_13858 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 7.7e-07 59.3 89 36.0
MELO3C022571.2 Cucumis melo HOM05D016993 ORTHO05D019020 1.7e-06 58.2 58 50.0


User provided reference genes

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