Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p43110 Brassica napus HOM05D009982 ORTHO05D006374 9.2e-133 476.9 235 100.0
BolC4t23809H Brassica oleracea HOM05D009982 ORTHO05D006374 7.1e-109 397.5 219 88.6
C06p11100 Brassica napus HOM05D009982 ORTHO05D006374 1.4e-85 320.1 166 93.4
BolC8t48827H Brassica oleracea HOM05D009982 ORTHO05D006374 2.0e-79 299.7 164 87.8
BcaB05g24055 Brassica carinata HOM05D009982 ORTHO05D006374 1.3e-78 297.0 164 85.4
BcaC04g21764 Brassica carinata HOM05D009982 ORTHO05D006374 9.6e-74 280.8 186 76.3
BcaB02g06512 Brassica carinata HOM05D009982 ORTHO05D006374 6.7e-67 258.1 243 57.2
BolC6t36230H Brassica oleracea HOM05D009982 ORTHO05D006374 6.3e-49 198.4 346 39.3
BolC3t19235H Brassica oleracea HOM05D009982 ORTHO05D006374 1.5e-42 177.2 96 86.5
BolC5t32406H Brassica oleracea HOM05D009982 ORTHO05D105778 3.2e-37 159.5 83 94.0
C04p67390 Brassica napus HOM05D009982 ORTHO05D006374 1.1e-29 134.4 68 89.7
BolC3t19236H Brassica oleracea HOM05D009982 ORTHO05D006374 9.5e-21 104.8 74 73.0
BolC7t43939H Brassica oleracea HOM05D009982 ORTHO05D006374 9.5e-21 104.8 74 73.0
BolC9t54058H Brassica oleracea HOM05D009982 ORTHO05D006374 9.5e-21 104.8 74 73.0
C03p69750 Brassica napus HOM05D009982 ORTHO05D006374 2.8e-20 103.2 58 89.7
BcaC01g01994 Brassica carinata HOM05D009982 ORTHO05D006374 2.3e-19 100.1 70 70.0
A04p04510 Brassica napus HOM05D009982 ORTHO05D006374 6.8e-19 98.6 74 68.9
BraA04t16161Z Brassica rapa HOM05D009982 ORTHO05D006374 3.4e-18 96.3 58 82.8
BolC3t19237H Brassica oleracea HOM05D009982 ORTHO05D006374 1.1e-16 91.3 47 89.4
BcaB01g05857 Brassica carinata HOM05D015617 ORTHO05D027394 2.4e-16 90.1 147 35.4
BcaB03g13748 Brassica carinata HOM05D009982 ORTHO05D006374 5.4e-16 89.0 160 38.8
BcaC04g21528 Brassica carinata HOM05D008134 ORTHO05D006374 1.3e-14 84.3 107 35.5
C01p39030 Brassica napus HOM05D009982 ORTHO05D006374 3.9e-14 82.8 50 84.0
BcaC01g01818 Brassica carinata HOM05D007948 ORTHO05D006374 2.1e-12 77.0 80 43.8
BcaC04g21372 Brassica carinata HOM05D007948 ORTHO05D006374 8.0e-12 75.1 115 40.0
BcaC04g21756 Brassica carinata HOM05D007948 ORTHO05D006374 1.8e-11 73.9 79 43.0
BcaC03g15866 Brassica carinata HOM05D007948 ORTHO05D006374 1.2e-10 71.2 79 40.5
BcaC08g45112 Brassica carinata HOM05D008134 ORTHO05D006374 2.0e-10 70.5 80 37.5
Sp4g09480 Schrenkiella parvula HOM05D009982 ORTHO05D006374 4.4e-10 69.3 64 57.8
Sp5g20400 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.3e-09 67.8 73 45.2
SpUn0003_0150 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.3e-09 67.8 75 37.3
C03p11460 Brassica napus HOM05D008134 ORTHO05D006374 2.9e-09 66.6 72 36.1
C09p41220 Brassica napus HOM05D008134 ORTHO05D006374 2.9e-09 66.6 72 36.1
BolC1t04558H Brassica oleracea HOM05D008134 ORTHO05D006374 2.9e-09 66.6 72 36.1
BcaC03g17091 Brassica carinata HOM05D007948 ORTHO05D006374 3.7e-09 66.2 105 34.3
Sp3g26770 Schrenkiella parvula HOM05D008134 ORTHO05D006374 3.7e-09 66.2 72 40.3
BolC2t10247H Brassica oleracea HOM05D008134 ORTHO05D006374 6.4e-09 65.5 107 31.8
Sp1g30420 Schrenkiella parvula HOM05D008134 ORTHO05D006374 6.4e-09 65.5 65 41.5
C03p65520 Brassica napus HOM05D008134 ORTHO05D006374 8.3e-09 65.1 72 36.1
BcaNung05563 Brassica carinata HOM05D007948 ORTHO05D006374 1.1e-08 64.7 77 44.2
C06p15100 Brassica napus HOM05D008134 ORTHO05D006374 1.1e-08 64.7 72 34.7
SpUn0089_0010 Schrenkiella parvula HOM05D007948 ORTHO05D006374 2.4e-08 63.5 70 42.9
C06p19630 Brassica napus HOM05D008134 ORTHO05D006374 3.2e-08 63.2 72 34.7
C07p16350 Brassica napus HOM05D008134 ORTHO05D006374 5.4e-08 62.4 72 34.7
C04p38260 Brassica napus HOM05D008134 ORTHO05D006374 1.2e-07 61.2 64 35.9
C05p28440 Brassica napus HOM05D008134 ORTHO05D012640 2.0e-07 60.5 90 32.2
BcaC03g14748 Brassica carinata HOM05D007948 ORTHO05D006374 3.5e-07 59.7 77 35.1
BcaC03g15932 Brassica carinata HOM05D007948 ORTHO05D006374 3.5e-07 59.7 76 35.5
BolC2t10321H Brassica oleracea HOM05D007948 ORTHO05D006374 3.5e-07 59.7 79 43.0
BolC7t40924H Brassica oleracea HOM05D007948 ORTHO05D006374 4.6e-07 59.3 69 42.0
BolC9t57184H Brassica oleracea HOM05D007948 ORTHO05D006374 6.0e-07 58.9 78 35.9
Sp4g10030 Schrenkiella parvula HOM05D012607 ORTHO05D014259 6.0e-07 58.9 111 32.4
BcaB02g11411 Brassica carinata HOM05D007948 ORTHO05D006374 7.8e-07 58.5 91 31.9
BolC6t38712H Brassica oleracea HOM05D007948 ORTHO05D006374 1.3e-06 57.8 68 36.8
C08p04050 Brassica napus HOM05D014211 ORTHO05D016021 2.3e-06 57.0 127 36.2
Sp7g06740 Schrenkiella parvula HOM05D007948 ORTHO05D006374 2.3e-06 57.0 77 37.7
Sp7g07610 Schrenkiella parvula HOM05D007948 ORTHO05D006374 2.3e-06 57.0 89 33.7
BcaC03g15118 Brassica carinata HOM05D007948 ORTHO05D006374 8.6e-06 55.1 129 29.5
C09p38760 Brassica napus HOM05D044207 ORTHO05D041253 8.6e-06 55.1 33 78.8
BolC9t56737H Brassica oleracea HOM05D044207 ORTHO05D041253 8.6e-06 55.1 33 78.8


User provided reference genes

Program Settings