Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p43060 Brassica napus HOM05D024133 ORTHO05D032796 1.6e-69 266.2 152 100.0
BolC2t10348H Brassica oleracea HOM05D024133 ORTHO05D032796 6.7e-60 234.2 152 86.2
BcaC03g16492 Brassica carinata HOM05D024133 ORTHO05D032796 3.0e-20 102.4 57 100.0
BcaC08g43510 Brassica carinata HOM05D000187 ORTHO05D000230 3.4e-19 99.0 57 89.5
C06p08960 Brassica napus HOM05D000187 ORTHO05D000230 3.4e-19 99.0 57 89.5
BolC6t35975H Brassica oleracea HOM05D000187 ORTHO05D000230 3.4e-19 99.0 57 89.5
BraA06t23341Z Brassica rapa HOM05D000187 ORTHO05D000230 1.8e-17 93.2 58 86.2
BcaB02g10937 Brassica carinata HOM05D000187 ORTHO05D000230 3.1e-17 92.4 58 86.2
Sp1g39770 Schrenkiella parvula HOM05D000187 ORTHO05D000230 9.2e-17 90.9 57 86.0
A06p01140 Brassica napus HOM05D000187 ORTHO05D000230 2.0e-16 89.7 58 82.8
A05p18510 Brassica napus HOM05D000187 ORTHO05D000230 4.5e-16 88.6 57 82.5
BraA05t20742Z Brassica rapa HOM05D000187 ORTHO05D000230 4.5e-16 88.6 57 82.5
Thhalv10011416m.g Eutrema salsugineum HOM05D000187 ORTHO05D000230 4.5e-16 88.6 57 84.2
BcaC08g44054 Brassica carinata HOM05D000187 ORTHO05D000230 7.8e-16 87.8 58 82.8
BolC6t36636H Brassica oleracea HOM05D000187 ORTHO05D000230 7.8e-16 87.8 58 82.8
AL1G61590 Arabidopsis lyrata HOM05D000187 ORTHO05D000230 1.7e-15 86.7 57 82.5
C06p14580 Brassica napus HOM05D000187 ORTHO05D000230 2.3e-15 86.3 58 81.0
AT1G53190 Arabidopsis thaliana HOM05D000187 ORTHO05D000230 5.0e-15 85.1 57 80.7
Carub.0001s4238 Capsella rubella HOM05D000187 ORTHO05D000230 2.5e-14 82.8 57 78.9
CARHR043420 Cardamine hirsuta HOM05D000187 ORTHO05D000230 3.3e-14 82.4 57 73.7
BcaB07g33350 Brassica carinata HOM05D000187 ORTHO05D000230 2.3e-12 76.3 57 73.7
BcaC08g43478 Brassica carinata HOM05D024133 ORTHO05D039534 2.6e-11 72.8 87 55.2
C06p08650 Brassica napus HOM05D024133 ORTHO05D039534 2.6e-11 72.8 87 55.2
Aa31LG10G1940 Aethionema arabicum HOM05D000187 ORTHO05D000230 1.7e-10 70.1 56 67.9
BcaC01g01368 Brassica carinata HOM05D000187 ORTHO05D000230 9.2e-09 64.3 56 67.9
AUR62019508 Chenopodium quinoa HOM05D000187 ORTHO05D000230 7.8e-08 61.2 60 61.7
AUR62036129 Chenopodium quinoa HOM05D000187 ORTHO05D000230 5.0e-07 58.5 60 60.0
AT3G15070 Arabidopsis thaliana HOM05D000187 ORTHO05D000230 1.9e-06 56.6 56 57.1
Hund22763 Selenicereus undatus HOM05D000187 ORTHO05D000230 1.9e-06 56.6 60 58.3
EL10Ac4g08284 Beta vulgaris HOM05D000187 ORTHO05D000230 2.5e-06 56.2 60 58.3
Aa31LG8G2280 Aethionema arabicum HOM05D000187 ORTHO05D000230 3.3e-06 55.8 56 53.6
AL3G27420 Arabidopsis lyrata HOM05D000187 ORTHO05D000230 5.6e-06 55.1 58 56.9


User provided reference genes

Program Settings