Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p42890 Brassica napus HOM05D022544 ORTHO05D027214 1.2e-146 523.1 262 100.0
C02p27680 Brassica napus HOM05D022544 ORTHO05D027214 1.2e-43 181.0 103 88.3
BcaC03g16478 Brassica carinata HOM05D022544 ORTHO05D027214 2.1e-37 160.2 102 85.3
BcaC03g15187 Brassica carinata HOM05D022544 ORTHO05D027214 1.1e-36 157.9 102 84.3
Atru.chr1.1115 Acer truncatum HOM05D000138 ORTHO05D007692 5.4e-17 92.4 138 47.1
BcaC02g12786 Brassica carinata HOM05D000138 ORTHO05D007692 1.5e-14 84.3 135 43.7
C04p02880 Brassica napus HOM05D000138 ORTHO05D007692 1.9e-14 84.0 138 41.3
A03p23390 Brassica napus HOM05D000138 ORTHO05D007692 5.6e-14 82.4 131 42.0
Sp4g23960 Schrenkiella parvula HOM05D000138 ORTHO05D007692 1.3e-13 81.3 134 43.3
Thhalv10016812m.g Eutrema salsugineum HOM05D000138 ORTHO05D007692 1.6e-13 80.9 140 41.4
C03p27910 Brassica napus HOM05D000138 ORTHO05D007692 4.8e-13 79.3 132 43.2
Aa31LG1G23730 Aethionema arabicum HOM05D000138 ORTHO05D007692 6.2e-13 79.0 139 43.2
BolC4t21928H Brassica oleracea HOM05D000138 ORTHO05D007692 9.0e-12 75.1 162 37.0
BraA03t11556Z Brassica rapa HOM05D000138 ORTHO05D007692 1.7e-10 70.9 44 79.5
THA.LOC104817716 Tarenaya hassleriana HOM05D000138 ORTHO05D007692 2.9e-10 70.1 138 38.4
BolC3t15163H Brassica oleracea HOM05D000138 ORTHO05D007692 4.9e-10 69.3 163 35.0
BcaB01g00961 Brassica carinata HOM05D022544 ORTHO05D094014 6.4e-10 68.9 46 71.7
Cpa.g.sc224.4 Carica papaya HOM05D000138 ORTHO05D007692 1.4e-09 67.8 136 38.2
Duzib128G1290 Durio zibethinus HOM05D000138 ORTHO05D007692 1.4e-09 67.8 134 38.1
THA.LOC104824439 Tarenaya hassleriana HOM05D000138 ORTHO05D007692 1.4e-09 67.8 140 37.1
Thecc.05G148300 Theobroma cacao HOM05D000138 ORTHO05D007692 1.4e-09 67.8 134 38.8
COL.COLO4_05666 Corchorus olitorius HOM05D000138 ORTHO05D007692 1.9e-09 67.4 131 39.7
Duzib106G1979 Durio zibethinus HOM05D000138 ORTHO05D007692 5.4e-09 65.9 131 38.9
TAR633G1382 Trochodendron aralioides HOM05D000138 ORTHO05D007692 7.1e-09 65.5 134 38.8
Gohir.A02G107600 Gossypium hirsutum HOM05D000138 ORTHO05D007692 1.6e-08 64.3 134 38.1
Gohir.D03G068900 Gossypium hirsutum HOM05D000138 ORTHO05D007692 1.6e-08 64.3 134 38.1
Gorai.003G091500 Gossypium raimondii HOM05D000138 ORTHO05D007692 1.6e-08 64.3 134 38.1
CiPaw.10G034100 Carya illinoinensis HOM05D000138 ORTHO05D007692 2.1e-08 63.9 137 36.5
Ciclev10005012m.g Citrus clementina HOM05D000138 ORTHO05D007692 3.5e-08 63.2 140 36.4
TWI53G0031 Tripterygium wilfordii HOM05D000138 ORTHO05D007692 3.5e-08 63.2 136 36.8
Carub.0004s2399 Capsella rubella HOM05D000138 ORTHO05D007692 1.0e-07 61.6 136 36.8
AL4G40020 Arabidopsis lyrata HOM05D000138 ORTHO05D007692 1.3e-07 61.2 141 35.5
Nn7g36311 Nelumbo nucifera HOM05D000138 ORTHO05D007692 3.0e-07 60.1 180 33.3
CARHR136810 Cardamine hirsuta HOM05D000138 ORTHO05D007692 3.9e-07 59.7 140 35.0
MSTRG.7574 Avicennia marina HOM05D000138 ORTHO05D007692 5.1e-07 59.3 155 32.9
Haze_19841 Corylus avellana HOM05D000138 ORTHO05D007692 5.1e-07 59.3 134 36.6
MD12G1075200 Malus domestica HOM05D000138 ORTHO05D007692 6.6e-07 58.9 139 34.5
AT2G41710 Arabidopsis thaliana HOM05D000138 ORTHO05D007692 8.7e-07 58.5 173 31.2
C07p33560 Brassica napus HOM05D030553 ORTHO05D027181 1.1e-06 58.2 44 72.7
BcaC08g44771 Brassica carinata HOM05D002006 ORTHO05D002128 1.5e-06 57.8 43 65.1
C02p46830 Brassica napus HOM05D030553 ORTHO05D027181 1.5e-06 57.8 46 67.4
Prupe.7G058300 Prunus persica HOM05D000138 ORTHO05D007692 1.5e-06 57.8 138 35.5
TWI74G0858 Tripterygium wilfordii HOM05D000138 ORTHO05D007692 1.5e-06 57.8 138 34.1
GSVIVG01033273001 Vitis vinifera HOM05D000138 ORTHO05D007692 1.9e-06 57.4 140 35.0
A05p02430 Brassica napus HOM05D000138 ORTHO05D007692 2.5e-06 57.0 126 36.5
BcaC03g16810 Brassica carinata HOM05D030553 ORTHO05D027181 3.3e-06 56.6 42 71.4
CsaV3_3G040690 Cucumis sativus L. HOM05D000138 ORTHO05D007692 4.3e-06 56.2 143 35.0
Rhsim03G0027000 Rhododendron simsii HOM05D000138 ORTHO05D007692 4.3e-06 56.2 135 37.0
Cfa016808 Carpinus fangiana HOM05D000138 ORTHO05D007692 5.6e-06 55.8 139 34.5
PGR004G0013 Punica granatum HOM05D000138 ORTHO05D007692 5.6e-06 55.8 134 34.3
vmacro07841 Vaccinium macrocarpon HOM05D000138 ORTHO05D007692 5.6e-06 55.8 118 35.6
MELO3C009804.2 Cucumis melo HOM05D000138 ORTHO05D007692 9.6e-06 55.1 143 35.0
Manes.09G020700 Manihot esculenta HOM05D000138 ORTHO05D007692 9.6e-06 55.1 143 35.0


User provided reference genes

Program Settings