Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p42630 Brassica napus HOM05D000025 ORTHO05D040844 2.2e-20 101.3 49 100.0
BolC2t10307H Brassica oleracea HOM05D000025 ORTHO05D040844 1.4e-19 98.6 49 98.0
A01p25580 Brassica napus HOM05D000025 ORTHO05D000040 3.6e-15 84.0 42 97.6
BraA01t02455Z Brassica rapa HOM05D000025 ORTHO05D000040 3.6e-15 84.0 42 97.6
C01p32050 Brassica napus HOM05D000025 ORTHO05D000040 1.0e-14 82.4 42 95.2
BolC1t03145H Brassica oleracea HOM05D000025 ORTHO05D000040 5.2e-14 80.1 42 92.9
BcaB05g22942 Brassica carinata HOM05D000025 ORTHO05D000040 8.9e-14 79.3 42 92.9
BcaNung07271 Brassica carinata HOM05D000025 ORTHO05D000040 8.9e-14 79.3 42 92.9
Thhalv10010323m.g Eutrema salsugineum HOM05D000025 ORTHO05D000040 2.0e-10 68.2 42 78.6
BcaB05g23024 Brassica carinata HOM05D000025 ORTHO05D000040 3.0e-09 64.3 42 73.8
BcaC09g49859 Brassica carinata HOM05D000025 ORTHO05D000040 3.0e-09 64.3 42 73.8
A01p25600 Brassica napus HOM05D000025 ORTHO05D000040 3.0e-09 64.3 42 73.8
C01p32080 Brassica napus HOM05D000025 ORTHO05D000040 3.0e-09 64.3 42 73.8
BolC1t03142H Brassica oleracea HOM05D000025 ORTHO05D000040 3.0e-09 64.3 42 73.8
BraA01t02453Z Brassica rapa HOM05D000025 ORTHO05D000040 3.0e-09 64.3 42 73.8
Sp5g13740 Schrenkiella parvula HOM05D000025 ORTHO05D000040 5.0e-09 63.5 42 71.4
AL5G27700 Arabidopsis lyrata HOM05D000025 ORTHO05D000040 6.6e-09 63.2 42 71.4
AT3G48300 Arabidopsis thaliana HOM05D000025 ORTHO05D000040 6.6e-09 63.2 42 71.4
Carub.0005s1448 Capsella rubella HOM05D000025 ORTHO05D000040 1.5e-08 62.0 42 69.0
A03p28280 Brassica napus HOM05D000025 ORTHO05D000040 4.3e-08 60.5 42 64.3
Carub.0005s1444 Capsella rubella HOM05D000025 ORTHO05D000040 4.3e-08 60.5 44 65.9
AT3G48270 Arabidopsis thaliana HOM05D000025 ORTHO05D000040 7.3e-08 59.7 42 66.7
BcaC01g04750 Brassica carinata HOM05D000025 ORTHO05D000040 7.3e-08 59.7 42 64.3
AL5G27680 Arabidopsis lyrata HOM05D000025 ORTHO05D000040 1.2e-07 58.9 41 65.9
Carub.0005s1445 Capsella rubella HOM05D000025 ORTHO05D000040 1.2e-07 58.9 41 68.3
AL5G27690 Arabidopsis lyrata HOM05D000025 ORTHO05D000040 1.6e-07 58.5 44 61.4
BcaC01g02332 Brassica carinata HOM05D000025 ORTHO05D000040 1.6e-07 58.5 42 64.3
C03p66490 Brassica napus HOM05D000025 ORTHO05D000040 1.6e-07 58.5 42 64.3
BolC3t18921H Brassica oleracea HOM05D000025 ORTHO05D000040 1.6e-07 58.5 42 64.3
BraA06t25696Z Brassica rapa HOM05D000025 ORTHO05D000040 1.6e-07 58.5 42 64.3
AL5G27670 Arabidopsis lyrata HOM05D000025 ORTHO05D000040 2.1e-07 58.2 42 64.3
AT3G48280 Arabidopsis thaliana HOM05D000025 ORTHO05D000040 2.1e-07 58.2 41 65.9
A06p27560 Brassica napus HOM05D000025 ORTHO05D000040 2.1e-07 58.2 42 64.3
CARHR157060 Cardamine hirsuta HOM05D000025 ORTHO05D000040 3.6e-07 57.4 42 61.9
Sp5g13760 Schrenkiella parvula HOM05D000025 ORTHO05D000040 4.7e-07 57.0 42 59.5
A06p19370 Brassica napus HOM05D000025 ORTHO05D000040 6.2e-07 56.6 42 61.9
Carub.0005s1447 Capsella rubella HOM05D000025 ORTHO05D000040 8.1e-07 56.2 42 64.3
CARHR056050 Cardamine hirsuta HOM05D000025 ORTHO05D000040 8.1e-07 56.2 44 56.8
CARHR157050 Cardamine hirsuta HOM05D000025 ORTHO05D000040 8.1e-07 56.2 44 61.4
BcaB02g10659 Brassica carinata HOM05D000025 ORTHO05D000040 1.1e-06 55.8 42 61.9
C03p34200 Brassica napus HOM05D000025 ORTHO05D000040 1.1e-06 55.8 42 57.1
AT3G48290 Arabidopsis thaliana HOM05D000025 ORTHO05D000040 3.1e-06 54.3 42 59.5
Carub.0005s1449 Capsella rubella HOM05D000025 ORTHO05D000040 4.0e-06 53.9 42 64.3
BolC3t15729H Brassica oleracea HOM05D000025 ORTHO05D000040 6.8e-06 53.1 35 65.7
CARHR157040 Cardamine hirsuta HOM05D000025 ORTHO05D000040 6.8e-06 53.1 41 61.0


User provided reference genes

Program Settings