Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p42130 Brassica napus HOM05D000621 ORTHO05D000421 3.7e-66 254.6 119 100.0
A02p26480 Brassica napus HOM05D000621 ORTHO05D000421 3.3e-54 214.9 141 73.8
BraA02t07651Z Brassica rapa HOM05D000621 ORTHO05D000421 3.3e-54 214.9 141 73.8
BcaB05g23877 Brassica carinata HOM05D000621 ORTHO05D000421 1.6e-48 196.1 143 67.1
BcaB05g23878 Brassica carinata HOM05D000621 ORTHO05D000421 3.5e-48 194.9 141 67.4
BcaB05g23880 Brassica carinata HOM05D000621 ORTHO05D000421 1.0e-39 166.8 141 58.2
BolC2t10254H Brassica oleracea HOM05D000621 ORTHO05D000421 2.3e-39 165.6 141 62.4
Sp6g06690 Schrenkiella parvula HOM05D000621 ORTHO05D000421 1.1e-30 136.7 115 55.7
BcaB01g01541 Brassica carinata HOM05D000621 ORTHO05D000421 9.7e-22 107.1 142 40.1
Carub.0006s2153 Capsella rubella HOM05D000621 ORTHO05D000421 8.2e-21 104.0 101 45.5
AL6G35070 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 5.3e-20 101.3 107 43.9
AT5G23800 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 2.6e-19 99.0 108 45.4
CARHR189760 Cardamine hirsuta HOM05D000621 ORTHO05D000421 1.4e-15 86.7 113 43.4
BcaC05g30032 Brassica carinata HOM05D000621 ORTHO05D000421 3.9e-15 85.1 112 35.7
C04p00660 Brassica napus HOM05D000621 ORTHO05D000421 6.7e-15 84.3 112 35.7
Thhalv10001344m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 6.7e-15 84.3 113 35.4
Thhalv10020194m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 6.7e-15 84.3 111 35.1
A05p41650 Brassica napus HOM05D000621 ORTHO05D000421 8.8e-15 84.0 111 33.3
BraA05t22885Z Brassica rapa HOM05D000621 ORTHO05D000421 8.8e-15 84.0 111 33.3
BcaB02g08792 Brassica carinata HOM05D000621 ORTHO05D000421 5.7e-14 81.3 115 35.7
CARHR189730 Cardamine hirsuta HOM05D000621 ORTHO05D000421 5.7e-14 81.3 111 37.8
BraA05t19058Z Brassica rapa HOM05D000621 ORTHO05D000421 7.4e-14 80.9 113 35.4
Sp3g05300 Schrenkiella parvula HOM05D000621 ORTHO05D000421 1.3e-13 80.1 111 32.4
BcaC02g12582 Brassica carinata HOM05D000621 ORTHO05D000421 1.7e-13 79.7 111 35.1
BolC4t21699H Brassica oleracea HOM05D000621 ORTHO05D000421 1.7e-13 79.7 111 35.1
BcaC05g29812 Brassica carinata HOM05D000621 ORTHO05D000421 2.2e-13 79.3 112 33.0
C05p60860 Brassica napus HOM05D000621 ORTHO05D000421 2.2e-13 79.3 112 33.0
BolC5t34743H Brassica oleracea HOM05D000621 ORTHO05D000421 2.2e-13 79.3 112 33.0
CARHR025430 Cardamine hirsuta HOM05D000621 ORTHO05D000421 3.7e-13 78.6 110 30.9
BcaB04g21331 Brassica carinata HOM05D000621 ORTHO05D000421 4.8e-13 78.2 106 34.0
CARHR142620 Cardamine hirsuta HOM05D000621 ORTHO05D000421 6.3e-13 77.8 114 32.5
AL4G46780 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 1.8e-12 76.3 113 29.2
AT2G47230 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 1.8e-12 76.3 109 28.4
Thhalv10001340m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 1.8e-12 76.3 111 33.3
Carub.0001s0241 Capsella rubella HOM05D000621 ORTHO05D000421 2.4e-12 75.9 119 32.8
AL1G39190 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 3.1e-12 75.5 116 29.3
Carub.0001s2450 Capsella rubella HOM05D000621 ORTHO05D000421 4.1e-12 75.1 117 30.8
A05p00610 Brassica napus HOM05D000621 ORTHO05D000421 1.2e-11 73.6 108 33.3
AT1G26540 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 1.5e-11 73.2 113 30.1
BNapus_Darmor_BZH_scaffold_118p00170 Brassica napus HOM05D000621 ORTHO05D000421 2.0e-11 72.8 110 30.0
CARHR142610 Cardamine hirsuta HOM05D000621 ORTHO05D000421 2.6e-11 72.4 107 30.8
AL1G12810 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 4.5e-11 71.6 115 32.2
Carub.0006s2152 Capsella rubella HOM05D000621 ORTHO05D000421 5.9e-11 71.2 124 33.9
Carub.0004s2996 Capsella rubella HOM05D000621 ORTHO05D000421 7.7e-11 70.9 106 31.1
AL6G35050 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 1.0e-10 70.5 119 36.1
BcaC09g47891 Brassica carinata HOM05D000621 ORTHO05D000421 1.3e-10 70.1 110 29.1
BolC1t05625H Brassica oleracea HOM05D000621 ORTHO05D000421 1.3e-10 70.1 110 29.1
Aa31LG1G28530 Aethionema arabicum HOM05D000621 ORTHO05D000421 6.5e-10 67.8 111 28.8
BcaB04g21333 Brassica carinata HOM05D000621 ORTHO05D000421 6.5e-10 67.8 93 34.4
BraA01t04442Z Brassica rapa HOM05D000621 ORTHO05D000421 6.5e-10 67.8 110 28.2
BcaB06g29457 Brassica carinata HOM05D000621 ORTHO05D000421 1.9e-09 66.2 108 34.3
C04p27980 Brassica napus HOM05D006890 ORTHO05D000421 2.5e-09 65.9 109 27.5
BolC4t24343H Brassica oleracea HOM05D000621 ORTHO05D000421 2.5e-09 65.9 109 27.5
Thhalv10027025m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 2.5e-09 65.9 116 34.5
A03p65960 Brassica napus HOM05D006890 ORTHO05D000421 3.2e-09 65.5 104 27.9
BraA03t15648Z Brassica rapa HOM05D006890 ORTHO05D000421 3.2e-09 65.5 104 27.9
BcaC04g20095 Brassica carinata HOM05D006890 ORTHO05D000421 4.2e-09 65.1 109 29.4
BolC9t57611H Brassica oleracea HOM05D000621 ORTHO05D000421 4.2e-09 65.1 109 27.5
A09p49030 Brassica napus HOM05D000621 ORTHO05D000421 5.5e-09 64.7 107 27.1
A09p62230 Brassica napus HOM05D006890 ORTHO05D000421 5.5e-09 64.7 107 27.1
AT1G11420 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 7.2e-09 64.3 111 29.7
BcaB05g22914 Brassica carinata HOM05D006890 ORTHO05D000421 7.2e-09 64.3 109 26.6
BcaC09g47889 Brassica carinata HOM05D000621 ORTHO05D000421 7.2e-09 64.3 107 27.1
A03p49030 Brassica napus HOM05D000621 ORTHO05D000421 7.2e-09 64.3 107 27.1
BolC1t02733H Brassica oleracea HOM05D003348 ORTHO05D010016 7.2e-09 64.3 109 27.5
BolC1t05626H Brassica oleracea HOM05D000621 ORTHO05D000421 7.2e-09 64.3 107 27.1
THA.LOC104802141 Tarenaya hassleriana HOM05D000621 ORTHO05D000421 7.2e-09 64.3 113 31.9
BolC6t38447H Brassica oleracea HOM05D000621 ORTHO05D000421 9.4e-09 63.9 108 28.7
BNapus_Darmor_BZH_scaffold_118p00180 Brassica napus HOM05D000621 ORTHO05D000421 1.6e-08 63.2 107 28.0
BraA09t39939Z Brassica rapa HOM05D003348 ORTHO05D011028 2.1e-08 62.8 101 27.7
BcaB08g35588 Brassica carinata HOM05D006890 ORTHO05D000421 2.7e-08 62.4 109 27.5
BcaC05g29811 Brassica carinata HOM05D000621 ORTHO05D000421 2.7e-08 62.4 114 32.5
BcaC05g30033 Brassica carinata HOM05D000621 ORTHO05D000421 2.7e-08 62.4 120 27.5
BolC8t46861H Brassica oleracea HOM05D003348 ORTHO05D010016 2.7e-08 62.4 108 29.6
BolC9t58202H Brassica oleracea HOM05D003348 ORTHO05D011028 2.7e-08 62.4 114 28.1
AL5G45060 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 3.6e-08 62.0 108 31.5
C09p53280 Brassica napus HOM05D003348 ORTHO05D011028 4.7e-08 61.6 113 28.3
AL2G23500 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 6.1e-08 61.2 108 31.5
Cpa.g.sc18.95 Carica papaya HOM05D000621 ORTHO05D000421 7.9e-08 60.8 114 28.9
BolC2t10876H Brassica oleracea HOM05D000621 ORTHO05D000421 1.4e-07 60.1 101 28.7
C09p44090 Brassica napus HOM05D000621 ORTHO05D000421 1.8e-07 59.7 109 25.7
BolC4t21700H Brassica oleracea HOM05D000621 ORTHO05D000421 1.8e-07 59.7 111 27.0
C04p00670 Brassica napus HOM05D000621 ORTHO05D000421 3.0e-07 58.9 111 27.0
C04p13160 Brassica napus HOM05D000621 ORTHO05D000421 3.0e-07 58.9 99 27.3
BcaB01g00357 Brassica carinata HOM05D006890 ORTHO05D009907 3.9e-07 58.5 107 29.0
BcaB01g01108 Brassica carinata HOM05D000621 ORTHO05D000421 3.9e-07 58.5 107 26.2
BraA08t33037Z Brassica rapa HOM05D000621 ORTHO05D000421 3.9e-07 58.5 97 32.0
BcaB01g01117 Brassica carinata HOM05D006890 ORTHO05D009907 5.1e-07 58.2 107 29.0
BcaB01g02579 Brassica carinata HOM05D006890 ORTHO05D009907 5.1e-07 58.2 107 29.0
BcaB06g26669 Brassica carinata HOM05D006890 ORTHO05D009907 5.1e-07 58.2 109 23.9
BcaB08g34800 Brassica carinata HOM05D006890 ORTHO05D000421 5.1e-07 58.2 105 26.7
BolC9t57629H Brassica oleracea HOM05D000621 ORTHO05D000421 5.1e-07 58.2 109 27.5
BcaB02g08793 Brassica carinata HOM05D000621 ORTHO05D000421 6.7e-07 57.8 93 29.0
Thhalv10005813m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 8.8e-07 57.4 106 28.3
Hma1.2p1_0408F.1_g146480 Hydrangea macrophylla HOM05D000621 ORTHO05D000421 1.1e-06 57.0 102 28.4
A08p10370 Brassica napus HOM05D000621 ORTHO05D000421 1.5e-06 56.6 98 30.6
BolC9t57897H Brassica oleracea HOM05D003348 ORTHO05D010016 1.5e-06 56.6 107 26.2
C05p18950 Brassica napus HOM05D006890 ORTHO05D000421 2.0e-06 56.2 108 25.9
FAN23G0943 Fragaria x ananassa HOM05D000621 ORTHO05D000421 2.6e-06 55.8 100 29.0
A05p00620 Brassica napus HOM05D004146 ORTHO05D004843 3.3e-06 55.5 111 26.1
C01p27990 Brassica napus HOM05D000621 ORTHO05D000421 3.3e-06 55.5 91 28.6
CANSAT64G2764 Cannabis sativa HOM05D000621 ORTHO05D000421 3.3e-06 55.5 113 24.8
BcaB08g34799 Brassica carinata HOM05D006890 ORTHO05D000421 4.4e-06 55.1 94 26.6
FvH4_1g26800 Fragaria vesca HOM05D000621 ORTHO05D000421 4.4e-06 55.1 100 29.0
FAN28G1859 Fragaria x ananassa HOM05D000621 ORTHO05D000421 4.4e-06 55.1 100 29.0
AT5G23770 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 5.7e-06 54.7 115 30.4
Cfa005755 Carpinus fangiana HOM05D000621 ORTHO05D000421 5.7e-06 54.7 108 26.9
Medtr1g084210 Medicago truncatula HOM05D000621 ORTHO05D000421 5.7e-06 54.7 105 33.3
Carub.0005s2902 Capsella rubella HOM05D000621 ORTHO05D000421 7.4e-06 54.3 90 31.1
Haze_05080 Corylus avellana HOM05D000621 ORTHO05D000421 7.4e-06 54.3 108 26.9
FAN19G2659 Fragaria x ananassa HOM05D000621 ORTHO05D000421 7.4e-06 54.3 100 29.0
FAN26G2638 Fragaria x ananassa HOM05D000621 ORTHO05D000421 7.4e-06 54.3 100 29.0
A07p25950 Brassica napus HOM05D000621 ORTHO05D000421 9.7e-06 53.9 106 29.2
BraA07t30242Z Brassica rapa HOM05D000621 ORTHO05D000421 9.7e-06 53.9 106 29.2
DCAR_028263 Daucus carota HOM05D000621 ORTHO05D000421 9.7e-06 53.9 118 28.0


User provided reference genes

Program Settings