Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 6.0e-145 517.7 299 100.0
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 1.2e-129 466.8 302 92.4
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 3.1e-125 452.2 362 78.7
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 3.1e-125 452.2 362 78.7
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 2.7e-105 386.0 338 72.5
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 6.0e-105 384.8 395 64.8
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 2.8e-102 375.9 391 63.7
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 1.4e-101 373.6 337 71.5
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 5.3e-101 371.7 364 67.3
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 6.5e-99 364.8 364 66.2
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 4.5e-92 342.0 367 64.0
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 3.6e-89 332.4 369 61.2
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 6.7e-88 328.2 338 62.4
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 2.2e-86 323.2 338 64.8
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 2.2e-86 323.2 332 63.3
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 4.7e-81 305.4 369 53.7
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 7.4e-79 298.1 350 60.0
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 1.7e-78 297.0 385 56.4
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 5.9e-76 288.5 344 56.1
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 2.6e-63 246.5 329 49.8
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 2.8e-62 243.0 312 48.7
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 4.5e-60 235.7 311 48.2
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 5.9e-60 235.3 314 46.8
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 8.5e-59 231.5 314 46.2
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 8.5e-59 231.5 387 45.7
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 3.2e-58 229.6 312 46.8
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 7.2e-58 228.4 315 45.4
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 1.6e-57 227.3 321 51.1
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 2.7e-57 226.5 314 46.5
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 4.7e-57 225.7 315 45.7
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 6.1e-57 225.3 314 46.8
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 1.4e-56 224.2 324 50.6
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 5.2e-56 222.2 314 46.5
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 2.0e-55 220.3 314 45.2
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 2.0e-55 220.3 417 45.8
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 2.0e-55 220.3 328 43.9
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 5.7e-55 218.8 319 44.5
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 5.7e-55 218.8 314 46.8
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 7.5e-55 218.4 317 45.4
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 7.5e-55 218.4 314 45.2
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 1.3e-54 217.6 394 47.0
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 1.3e-54 217.6 314 47.1
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 1.3e-54 217.6 310 44.2
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 3.7e-54 216.1 396 44.2
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 3.7e-54 216.1 324 44.4
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 4.8e-54 215.7 314 44.9
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 4.8e-54 215.7 326 42.6
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 1.8e-53 213.8 370 41.9
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 2.4e-53 213.4 312 43.3
BolC2t10164H Brassica oleracea HOM05D005805 ORTHO05D007226 2.4e-53 213.4 110 99.1
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 3.1e-53 213.0 339 42.5
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 7.0e-53 211.8 321 46.1
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 9.1e-53 211.5 341 47.2
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 9.1e-53 211.5 326 42.3
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 1.2e-52 211.1 314 43.0
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 1.2e-52 211.1 307 52.8
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 2.0e-52 210.3 324 44.8
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 3.5e-52 209.5 321 48.3
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 5.9e-52 208.8 313 45.4
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 5.9e-52 208.8 388 46.6
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 2.9e-51 206.5 316 45.6
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 3.8e-51 206.1 356 48.6
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 1.1e-50 204.5 391 45.5
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 1.9e-50 203.8 398 37.7
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.9e-50 203.8 376 46.3
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 7.2e-50 201.8 314 42.4
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 1.6e-49 200.7 397 43.1
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 2.8e-49 199.9 355 41.4
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 6.1e-49 198.7 315 43.8
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 2.3e-48 196.8 391 44.8
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 3.0e-48 196.4 324 40.7
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 4.0e-48 196.1 391 44.8
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 4.0e-48 196.1 271 51.7
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 1.5e-47 194.1 313 42.2
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 2.0e-47 193.7 326 41.4
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 2.6e-47 193.4 377 45.4
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 3.4e-47 193.0 436 37.8
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 9.8e-47 191.4 346 48.6
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 9.8e-47 191.4 415 41.4
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 4.9e-46 189.1 351 47.6
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 6.3e-46 188.7 449 40.5
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 1.4e-45 187.6 400 36.2
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 1.8e-45 187.2 387 42.4
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 4.1e-45 186.0 399 37.6
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 5.4e-45 185.7 414 41.3
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 1.2e-44 184.5 433 39.5
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 3.5e-44 183.0 271 43.2
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 3.5e-44 183.0 423 40.2
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 5.9e-44 182.2 418 42.8
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 5.9e-44 182.2 422 40.5
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 5.9e-44 182.2 422 40.5
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 3.9e-43 179.5 432 39.6
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 3.9e-43 179.5 357 37.5
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.1e-42 177.9 360 45.3
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 2.5e-42 176.8 416 38.7
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 3.3e-42 176.4 311 39.5
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 1.2e-41 174.5 172 58.1
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 3.6e-41 172.9 403 40.4
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 1.4e-40 171.0 431 34.8
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 1.8e-40 170.6 444 37.4
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 1.8e-40 170.6 412 40.0
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 4.0e-40 169.5 339 36.3
Rhsim08G0109800 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.2e-40 169.1 278 42.4
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 8.9e-40 168.3 385 41.3
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 1.2e-39 167.9 386 42.5
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 2.0e-39 167.2 172 55.8
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 5.8e-39 165.6 453 37.1
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 9.8e-39 164.9 417 38.1
COL.COLO4_05276 Corchorus olitorius HOM05D005805 ORTHO05D007226 1.7e-38 164.1 138 65.2
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 4.9e-38 162.5 385 39.0
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 8.3e-38 161.8 315 36.2
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 8.3e-38 161.8 242 43.0
Manes.02G028100 Manihot esculenta HOM05D005805 ORTHO05D007226 8.3e-38 161.8 367 44.7
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 1.1e-37 161.4 308 36.4
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 3.2e-37 159.8 374 35.6
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 9.2e-37 158.3 381 40.7
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 2.8e-33 146.7 428 30.1
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 4.4e-31 139.4 434 35.7
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 4.4e-31 139.4 434 35.7
TAR374G1484 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.1e-29 134.8 149 55.0
Gohir.D08G196900 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.0e-27 128.3 133 57.1
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 1.3e-27 127.9 261 39.5
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 4.0e-24 116.3 282 42.2
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 5.4e-21 105.9 367 33.5
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 2.1e-17 94.0 295 28.5
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 2.9e-14 83.6 98 41.8
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 9.2e-13 78.6 356 25.3
SGA_v2.0_scaffold60G21020 Striga asiatica HOM05D011763 ORTHO05D014257 4.6e-12 76.3 80 51.2
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 2.8e-09 67.0 109 37.6
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 2.9e-06 57.0 121 32.2


User provided reference genes

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