Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p41410 Brassica napus HOM05D025096 ORTHO05D022059 1.5e-121 439.5 220 100.0
A09p19930 Brassica napus HOM05D025096 ORTHO05D022059 5.5e-47 191.8 116 84.5
BolC3t19147H Brassica oleracea HOM05D025096 ORTHO05D022059 2.4e-42 176.4 95 91.6
C03p68920 Brassica napus HOM05D025096 ORTHO05D022059 6.6e-24 115.2 105 60.0
Thhalv10012836m.g Eutrema salsugineum HOM05D000793 ORTHO05D000783 7.0e-18 95.1 77 62.3
Sp6g27965 Schrenkiella parvula HOM05D000793 ORTHO05D000783 1.2e-17 94.4 77 61.0
CARHR197120 Cardamine hirsuta HOM05D000793 ORTHO05D000783 3.5e-17 92.8 77 61.0
BcaC03g18480 Brassica carinata HOM05D000793 ORTHO05D000783 1.3e-16 90.9 77 57.1
BcaNung02225 Brassica carinata HOM05D000793 ORTHO05D000783 1.3e-16 90.9 77 57.1
AL6G27060 Arabidopsis lyrata HOM05D000793 ORTHO05D000783 3.0e-16 89.7 77 58.4
AT5G16180 Arabidopsis thaliana HOM05D000793 ORTHO05D000783 8.6e-16 88.2 77 59.7
Aa31LG11G13420 Aethionema arabicum HOM05D000793 ORTHO05D000783 4.3e-15 85.9 107 44.9
A02p03420 Brassica napus HOM05D000793 ORTHO05D000783 4.3e-15 85.9 77 58.4
BraA02t05313Z Brassica rapa HOM05D000793 ORTHO05D000783 4.3e-15 85.9 77 58.4
Carub.0006s1437 Capsella rubella HOM05D000793 ORTHO05D000783 4.3e-15 85.9 77 55.8
THA.LOC104820940 Tarenaya hassleriana HOM05D000793 ORTHO05D000783 5.6e-15 85.5 80 52.5
BcaC03g18473 Brassica carinata HOM05D000793 ORTHO05D000783 3.6e-14 82.8 80 53.8
C02p08180 Brassica napus HOM05D000793 ORTHO05D000783 3.6e-14 82.8 80 53.8
BolC2t06742H Brassica oleracea HOM05D000793 ORTHO05D000783 3.6e-14 82.8 80 53.8
CSS0012068 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 2.3e-13 80.1 176 30.7
CSS0040604 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 3.1e-13 79.7 176 30.7
CANSAT78G1170 Cannabis sativa HOM05D000793 ORTHO05D000783 5.8e-12 75.5 91 45.1
arahy.Tifrunner.gnm1.ann1.87GB58 Arachis hypogaea HOM05D000793 ORTHO05D000783 3.7e-11 72.8 72 48.6
arahy.Tifrunner.gnm1.ann1.LVM5YM Arachis hypogaea HOM05D000793 ORTHO05D000783 3.7e-11 72.8 72 48.6
Solyc02g086200.3 Solanum lycopersicum HOM05D000793 ORTHO05D000783 3.7e-11 72.8 110 39.1
Sopen02g030880 Solanum pennellii HOM05D000793 ORTHO05D000783 4.9e-11 72.4 110 39.1
VMungo1383G3712 Vigna mungo HOM05D000793 ORTHO05D000783 4.9e-11 72.4 79 45.6
Hma1.2p1_0075F.1_g039280 Hydrangea macrophylla HOM05D000793 ORTHO05D000783 6.4e-11 72.0 91 41.8
Medtr2g100660 Medicago truncatula HOM05D000793 ORTHO05D000783 1.1e-10 71.2 77 46.8
arahy.Tifrunner.gnm1.ann1.IR2EG3 Arachis hypogaea HOM05D000793 ORTHO05D000783 1.4e-10 70.9 74 44.6
arahy.Tifrunner.gnm1.ann1.USTW7R Arachis hypogaea HOM05D000793 ORTHO05D000783 1.4e-10 70.9 79 43.0
Dinv33958 Davidia involucrata HOM05D000793 ORTHO05D000783 1.4e-10 70.9 114 36.0
Peaxi162Scf00394g00815 Petunia axillaris HOM05D000793 ORTHO05D000783 1.4e-10 70.9 164 33.5
PGSC0003DMG401026400 Solanum tuberosum HOM05D000793 ORTHO05D000783 1.4e-10 70.9 145 32.4
TPR.G38736 Trifolium pratense HOM05D000793 ORTHO05D000783 1.9e-10 70.5 77 45.5
Ciclev10013368m.g Citrus clementina HOM05D000793 ORTHO05D000783 3.2e-10 69.7 82 42.7
Dinv34808 Davidia involucrata HOM05D000793 ORTHO05D000783 3.2e-10 69.7 80 43.8
Glyma.18G295000 Glycine max HOM05D000793 ORTHO05D000783 3.2e-10 69.7 77 44.2
Phvul.008G007700 Phaseolus vulgaris HOM05D000793 ORTHO05D000783 3.2e-10 69.7 79 43.0
Nn4g24848 Nelumbo nucifera HOM05D000793 ORTHO05D000783 7.0e-10 68.6 123 35.8
Cpa.g.sc170.50 Carica papaya HOM05D000793 ORTHO05D000783 9.2e-10 68.2 82 45.1
Nitab4.5_0000912g0050 Nicotiana tabacum HOM05D000793 ORTHO05D000783 9.2e-10 68.2 161 31.1
BraA03t14354Z Brassica rapa HOM05D025096 ORTHO05D022059 1.2e-09 67.8 34 91.2
Potri.017G116700 Populus trichocarpa HOM05D000793 ORTHO05D000783 1.2e-09 67.8 91 41.8
Aqoxy3G00226 Aquilegia oxysepala HOM05D000793 ORTHO05D000783 1.6e-09 67.4 80 42.5
CAN.G625.36 Capsicum annuum HOM05D000793 ORTHO05D000783 1.6e-09 67.4 148 31.1
Psat7g263480 Pisum sativum HOM05D000793 ORTHO05D000783 1.6e-09 67.4 77 45.5
Atru.chr1.1644 Acer truncatum HOM05D000793 ORTHO05D000783 2.0e-09 67.0 82 43.9
Atru.chr1.1645 Acer truncatum HOM05D000793 ORTHO05D000783 2.0e-09 67.0 82 43.9
Nitab4.5_0007990g0070 Nicotiana tabacum HOM05D000793 ORTHO05D000783 2.0e-09 67.0 161 31.7
Cc07_g08670 Coffea canephora HOM05D000793 ORTHO05D000783 2.7e-09 66.6 80 40.0
Lalb_Chr04g0257551 Lupinus albus HOM05D000793 ORTHO05D000783 2.7e-09 66.6 77 40.3
Ca_20956_v3 Cicer arietinum L. HOM05D000793 ORTHO05D000783 3.5e-09 66.2 77 41.6
ECA238G0576 Erigeron canadensis HOM05D000793 ORTHO05D000783 3.5e-09 66.2 77 40.3
Cfa007907 Carpinus fangiana HOM05D000793 ORTHO05D000783 4.6e-09 65.9 106 37.7
Lsat_1_v5_gn_2_79400 Lactuca sativa HOM05D000793 ORTHO05D000783 4.6e-09 65.9 77 41.6
Lj4A190G75 Lonicera japonica HOM05D000793 ORTHO05D000783 4.6e-09 65.9 80 40.0
vmacro05535 Vaccinium macrocarpon HOM05D000793 ORTHO05D000783 4.6e-09 65.9 80 41.2
Os08g0360100 Oryza sativa ssp. japonica HOM05D000793 ORTHO05D000783 6.0e-09 65.5 80 42.5
Eucgr.F02508 Eucalyptus grandis HOM05D000793 ORTHO05D000783 7.8e-09 65.1 80 37.5
PGR004G0321 Punica granatum HOM05D000793 ORTHO05D000783 7.8e-09 65.1 86 40.7
Rhsim10G0069300 Rhododendron simsii HOM05D000793 ORTHO05D000783 7.8e-09 65.1 182 29.1
Sabra17G0096600 Salix brachista HOM05D000793 ORTHO05D000783 7.8e-09 65.1 166 31.9
TAR629G2273 Trochodendron aralioides HOM05D000793 ORTHO05D000783 7.8e-09 65.1 78 41.0
Duzib052G0508 Durio zibethinus HOM05D000793 ORTHO05D000783 1.0e-08 64.7 79 41.8
Lj1g0019544 Lotus japonicus HOM05D000793 ORTHO05D000783 1.0e-08 64.7 77 44.2
Sc11g0008430 Simmondsia chinensis HOM05D000793 ORTHO05D000783 1.0e-08 64.7 80 41.2
AUR62009017 Chenopodium quinoa HOM05D000793 ORTHO05D000783 1.3e-08 64.3 77 42.9
MBI16_g42518_MAGBIO Magnolia biondii HOM05D000793 ORTHO05D000783 1.3e-08 64.3 82 37.8
GSVIVG01031001001 Vitis vinifera HOM05D000793 ORTHO05D000783 1.3e-08 64.3 80 40.0
ClCG11G007830 Citrullus lanatus HOM05D000793 ORTHO05D000783 1.7e-08 63.9 77 41.6
Haze_14173 Corylus avellana HOM05D000793 ORTHO05D000783 1.7e-08 63.9 82 42.7
TAR629G2628 Trochodendron aralioides HOM05D000793 ORTHO05D000783 1.7e-08 63.9 82 41.5
QL02p050861 Quercus lobata HOM05D000793 ORTHO05D000783 2.3e-08 63.5 82 41.5
QL12p016370 Quercus lobata HOM05D000793 ORTHO05D000783 2.3e-08 63.5 82 41.5
DCAR_025905 Daucus carota HOM05D000793 ORTHO05D000783 3.0e-08 63.2 80 41.2
SGA_v2.0_scaffold49G18113 Striga asiatica HOM05D000793 ORTHO05D000783 3.0e-08 63.2 144 30.6
COL.COLO4_09355 Corchorus olitorius HOM05D000793 ORTHO05D000783 3.9e-08 62.8 74 43.2
MELO3C008146.2 Cucumis melo HOM05D000793 ORTHO05D000783 3.9e-08 62.8 117 36.8
HanXRQChr14g0440471 Helianthus annuus HOM05D000793 ORTHO05D000783 3.9e-08 62.8 79 43.0
CiPaw.04G043500 Carya illinoinensis HOM05D000793 ORTHO05D000783 5.0e-08 62.4 82 41.5
Sed0009672 Sechium edule HOM05D000793 ORTHO05D000783 5.0e-08 62.4 81 40.7
Hund13706 Selenicereus undatus HOM05D000793 ORTHO05D000783 5.0e-08 62.4 77 40.3
TWI74G1195 Tripterygium wilfordii HOM05D000793 ORTHO05D000783 6.6e-08 62.0 80 41.2
CsaV3_2G033770 Cucumis sativus L. HOM05D000793 ORTHO05D000783 8.6e-08 61.6 89 39.3
MD09G1254900 Malus domestica HOM05D000793 ORTHO05D000783 8.6e-08 61.6 176 29.5
Oeu050381.1 Olea europaea HOM05D000793 ORTHO05D000783 8.6e-08 61.6 80 40.0
Actinidia15895 Actinidia chinensis HOM05D000793 ORTHO05D000783 1.1e-07 61.2 77 39.0
Gohir.A11G164200 Gossypium hirsutum HOM05D000793 ORTHO05D000783 1.1e-07 61.2 91 36.3
Gohir.D11G170500 Gossypium hirsutum HOM05D000793 ORTHO05D000783 1.1e-07 61.2 91 36.3
Gorai.007G182400 Gossypium raimondii HOM05D000793 ORTHO05D000783 1.1e-07 61.2 91 36.3
Prupe.3G145000 Prunus persica HOM05D000793 ORTHO05D000783 1.9e-07 60.5 174 31.0
Thecc.04G131100 Theobroma cacao HOM05D000793 ORTHO05D000783 3.3e-07 59.7 82 40.2
PSO478G3590 Papaver somniferum HOM05D000793 ORTHO05D000783 4.3e-07 59.3 77 36.4
ATR1125G057 Amborella trichopoda HOM05D000793 ORTHO05D000783 5.6e-07 58.9 88 35.2
Nitab4.5_0009306g0020 Nicotiana tabacum HOM05D000793 ORTHO05D000783 1.6e-06 57.4 79 40.5
Peaxi162Scf00015g01028 Petunia axillaris HOM05D000793 ORTHO05D000783 1.6e-06 57.4 79 40.5
Nitab4.5_0000974g0110 Nicotiana tabacum HOM05D000793 ORTHO05D000783 2.1e-06 57.0 79 40.5
EL10Ac2g04549 Beta vulgaris HOM05D000793 ORTHO05D000783 2.8e-06 56.6 97 36.1
HanXRQChr11g0338661 Helianthus annuus HOM05D000793 ORTHO05D000783 2.8e-06 56.6 64 40.6
unitig_60.g25517 Utricularia gibba HOM05D000793 ORTHO05D000783 2.8e-06 56.6 77 37.7
Solyc03g119450.3 Solanum lycopersicum HOM05D000793 ORTHO05D000783 3.6e-06 56.2 75 38.7
Sopen03g038300 Solanum pennellii HOM05D000793 ORTHO05D000783 3.6e-06 56.2 75 38.7
PGSC0003DMG401005721 Solanum tuberosum HOM05D000793 ORTHO05D000783 3.6e-06 56.2 75 38.7
HPP92_006402 Vanilla planifolia HOM05D000793 ORTHO05D000783 3.6e-06 56.2 77 35.1
Migut.H00230 Erythranthe guttata HOM05D000793 ORTHO05D000783 6.2e-06 55.5 77 36.4
SalBow2G1346 Salvia bowleyana HOM05D000793 ORTHO05D000783 6.2e-06 55.5 61 42.6
unitig_744.g24446 Utricularia gibba HOM05D000793 ORTHO05D000783 8.1e-06 55.1 79 35.4


User provided reference genes

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