Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p40650 Brassica napus HOM05D000220 ORTHO05D103646 5.1e-38 160.6 82 100.0
C02p40690 Brassica napus HOM05D000220 ORTHO05D000141 3.4e-34 147.9 81 96.3
A02p25520 Brassica napus HOM05D000220 ORTHO05D000141 2.3e-30 135.2 90 80.0
A02p25540 Brassica napus HOM05D000220 ORTHO05D000141 6.6e-30 133.7 90 78.9
A02p25560 Brassica napus HOM05D000220 ORTHO05D000141 4.8e-28 127.5 89 76.4
BolC2t10086H Brassica oleracea HOM05D000220 ORTHO05D033222 2.6e-26 121.7 60 96.7
BcaC03g16271 Brassica carinata HOM05D000220 ORTHO05D000141 9.9e-26 119.8 61 93.4
BcaC03g16273 Brassica carinata HOM05D000220 ORTHO05D000141 9.9e-26 119.8 61 93.4
C02p40660 Brassica napus HOM05D000220 ORTHO05D033222 9.9e-26 119.8 61 93.4
C02p40670 Brassica napus HOM05D000220 ORTHO05D000141 9.9e-26 119.8 61 93.4
BolC2t10088H Brassica oleracea HOM05D000220 ORTHO05D104221 9.9e-26 119.8 61 93.4
BcaC03g16272 Brassica carinata HOM05D000220 ORTHO05D000141 2.2e-25 118.6 64 89.1
BcaC03g16274 Brassica carinata HOM05D000220 ORTHO05D000141 2.2e-25 118.6 64 89.1
A02p25550 Brassica napus HOM05D000220 ORTHO05D000141 2.2e-25 118.6 61 91.8
BraA02t07542Z Brassica rapa HOM05D000220 ORTHO05D000141 3.8e-25 117.9 61 91.8
BraA02t07539Z Brassica rapa HOM05D000220 ORTHO05D000141 4.9e-25 117.5 85 76.5
BcaC03g16275 Brassica carinata HOM05D000220 ORTHO05D000141 6.4e-25 117.1 61 91.8
C02p40700 Brassica napus HOM05D000220 ORTHO05D033222 1.1e-24 116.3 61 91.8
BcaC03g16276 Brassica carinata HOM05D000220 ORTHO05D000141 1.4e-24 115.9 61 90.2
BolC2t10089H Brassica oleracea HOM05D000220 ORTHO05D000141 1.4e-24 115.9 61 90.2
BcaB05g23742 Brassica carinata HOM05D000220 ORTHO05D000141 9.6e-21 103.2 61 77.0
A09p03400 Brassica napus HOM05D000220 ORTHO05D000141 7.1e-16 87.0 61 68.9
A09p03410 Brassica napus HOM05D000220 ORTHO05D000141 7.1e-16 87.0 61 68.9
BraA09t35978Z Brassica rapa HOM05D000220 ORTHO05D000141 7.1e-16 87.0 61 68.9
Carub.0006s3179 Capsella rubella HOM05D000220 ORTHO05D000141 2.3e-14 82.0 62 69.4
AT4G12550 Arabidopsis thaliana HOM05D000220 ORTHO05D000141 5.1e-14 80.9 62 66.1
BraA03t12169Z Brassica rapa HOM05D000220 ORTHO05D000141 5.1e-14 80.9 65 64.6
Carub.0006s3181 Capsella rubella HOM05D000220 ORTHO05D000141 1.1e-13 79.7 62 67.7
Carub.0006s3177 Capsella rubella HOM05D000220 ORTHO05D000141 1.5e-13 79.3 65 63.1
Carub.0006s3180 Capsella rubella HOM05D000220 ORTHO05D000141 1.5e-13 79.3 65 64.6
BcaC03g14823 Brassica carinata HOM05D000220 ORTHO05D000141 1.9e-13 79.0 61 60.7
BcaC03g14825 Brassica carinata HOM05D000220 ORTHO05D000141 1.9e-13 79.0 61 60.7
BcaC03g14826 Brassica carinata HOM05D000220 ORTHO05D000141 1.9e-13 79.0 61 60.7
BcaC03g14828 Brassica carinata HOM05D000220 ORTHO05D000141 1.9e-13 79.0 61 60.7
C02p22750 Brassica napus HOM05D000220 ORTHO05D000141 1.9e-13 79.0 61 60.7
C02p22760 Brassica napus HOM05D000220 ORTHO05D000141 1.9e-13 79.0 61 60.7
C02p22780 Brassica napus HOM05D000220 ORTHO05D000141 1.9e-13 79.0 61 60.7
C02p22820 Brassica napus HOM05D000220 ORTHO05D000141 1.9e-13 79.0 61 60.7
BolC2t08428H Brassica oleracea HOM05D000220 ORTHO05D000141 1.9e-13 79.0 61 60.7
BolC2t08430H Brassica oleracea HOM05D000220 ORTHO05D000141 1.9e-13 79.0 61 60.7
BcaB02g09823 Brassica carinata HOM05D000220 ORTHO05D000141 5.7e-13 77.4 61 62.3
BcaB02g09824 Brassica carinata HOM05D000220 ORTHO05D000141 5.7e-13 77.4 61 62.3
BcaB02g09825 Brassica carinata HOM05D000220 ORTHO05D000141 5.7e-13 77.4 61 62.3
BcaB02g09826 Brassica carinata HOM05D000220 ORTHO05D000141 5.7e-13 77.4 61 62.3
BcaB02g09827 Brassica carinata HOM05D000220 ORTHO05D000141 5.7e-13 77.4 61 62.3
BcaC03g14824 Brassica carinata HOM05D000220 ORTHO05D000141 5.7e-13 77.4 61 59.0
BcaC03g14827 Brassica carinata HOM05D000220 ORTHO05D000141 5.7e-13 77.4 55 65.5
C02p22770 Brassica napus HOM05D000220 ORTHO05D000141 5.7e-13 77.4 61 59.0
C02p22800 Brassica napus HOM05D000220 ORTHO05D000141 5.7e-13 77.4 61 59.0
BolC2t08429H Brassica oleracea HOM05D000220 ORTHO05D000141 5.7e-13 77.4 61 59.0
Carub.0006s3176 Capsella rubella HOM05D000220 ORTHO05D000141 2.1e-12 75.5 65 60.0
BcaB01g01749 Brassica carinata HOM05D000220 ORTHO05D000141 1.4e-11 72.8 74 55.4
A03p29770 Brassica napus HOM05D000220 ORTHO05D000141 1.4e-11 72.8 86 48.8
Carub.0006s3175 Capsella rubella HOM05D000220 ORTHO05D000141 9.0e-11 70.1 92 46.7
Carub.0006s3182 Capsella rubella HOM05D000220 ORTHO05D000141 9.0e-11 70.1 92 46.7
AT4G12545 Arabidopsis thaliana HOM05D000220 ORTHO05D000141 1.2e-10 69.7 62 64.5
C03p36030 Brassica napus HOM05D000220 ORTHO05D000141 1.5e-10 69.3 89 46.1
BolC3t15913H Brassica oleracea HOM05D000220 ORTHO05D000141 1.5e-10 69.3 89 46.1
Sp6g04960 Schrenkiella parvula HOM05D000220 ORTHO05D000141 1.7e-09 65.9 98 41.8
Thhalv10029045m.g Eutrema salsugineum HOM05D000220 ORTHO05D000141 2.2e-09 65.5 94 43.6
Solyc03g083998.1 Solanum lycopersicum HOM05D000220 ORTHO05D000141 5.0e-09 64.3 69 49.3
Aa31LG9G10100 Aethionema arabicum HOM05D000220 ORTHO05D000141 1.1e-08 63.2 40 67.5
CARHR253620 Cardamine hirsuta HOM05D000220 ORTHO05D000141 2.5e-08 62.0 101 40.6
Gorai.007G027500 Gossypium raimondii HOM05D000220 ORTHO05D000141 3.2e-08 61.6 43 60.5
C01p11260 Brassica napus HOM05D000220 ORTHO05D042481 5.5e-08 60.8 60 53.3
THA.LOC104806334 Tarenaya hassleriana HOM05D000220 ORTHO05D000141 5.5e-08 60.8 43 62.8
BolC1t01091H Brassica oleracea HOM05D000220 ORTHO05D042481 7.1e-08 60.5 55 56.4
Gohir.A11G025950 Gossypium hirsutum HOM05D000220 ORTHO05D000141 7.1e-08 60.5 43 58.1
Gohir.D11G025575 Gossypium hirsutum HOM05D000220 ORTHO05D000141 9.3e-08 60.1 43 58.1
Gohir.D11G025651 Gossypium hirsutum HOM05D000220 ORTHO05D000141 9.3e-08 60.1 43 58.1
Gorai.007G027700 Gossypium raimondii HOM05D000220 ORTHO05D000141 9.3e-08 60.1 43 58.1
PGSC0003DMG400028058 Solanum tuberosum HOM05D000220 ORTHO05D000141 1.6e-07 59.3 56 51.8
PGSC0003DMG400028059 Solanum tuberosum HOM05D000220 ORTHO05D000141 1.6e-07 59.3 56 51.8
PGSC0003DMG400028060 Solanum tuberosum HOM05D000220 ORTHO05D000141 1.6e-07 59.3 56 51.8
Glyma.05G057500 Glycine max HOM05D000220 ORTHO05D000141 2.7e-07 58.5 81 40.7
Glyma.17G140000 Glycine max HOM05D000220 ORTHO05D000141 2.7e-07 58.5 81 42.0
Gohir.A11G025900 Gossypium hirsutum HOM05D000220 ORTHO05D000141 2.7e-07 58.5 76 42.1
Gorai.007G027400 Gossypium raimondii HOM05D000220 ORTHO05D000141 2.7e-07 58.5 76 42.1
CAN.G1217.4 Capsicum annuum HOM05D000220 ORTHO05D000141 3.5e-07 58.2 55 56.4
C05p11070 Brassica napus HOM05D000220 ORTHO05D000141 4.6e-07 57.8 44 61.4
Glyma.05G057200 Glycine max HOM05D000220 ORTHO05D000141 4.6e-07 57.8 81 40.7
MELO3C013954.2 Cucumis melo HOM05D000220 ORTHO05D000141 6.1e-07 57.4 40 62.5
Glyma.17G139800 Glycine max HOM05D000220 ORTHO05D000141 6.1e-07 57.4 81 40.7
Gohir.A11G026000 Gossypium hirsutum HOM05D000220 ORTHO05D000141 6.1e-07 57.4 78 41.0
Gohir.D08G189900 Gossypium hirsutum HOM05D000220 ORTHO05D000141 6.1e-07 57.4 77 40.3
Gohir.D11G025601 Gossypium hirsutum HOM05D000220 ORTHO05D000141 6.1e-07 57.4 78 41.0
Gorai.004G199900 Gossypium raimondii HOM05D000220 ORTHO05D000141 6.1e-07 57.4 77 40.3
Oeu006284.1 Olea europaea HOM05D000220 ORTHO05D000141 6.1e-07 57.4 77 44.2
RcHm_v2.0_Chr7g0202791 Rosa chinensis HOM05D000220 ORTHO05D000141 6.1e-07 57.4 43 58.1
THA.LOC104813634 Tarenaya hassleriana HOM05D000220 ORTHO05D000141 6.1e-07 57.4 89 39.3
MELO3C032267.2 Cucumis melo HOM05D000220 ORTHO05D044898 7.9e-07 57.0 77 42.9
Gohir.A11G026166 Gossypium hirsutum HOM05D000220 ORTHO05D000141 7.9e-07 57.0 81 39.5
Gorai.007G027200 Gossypium raimondii HOM05D000220 ORTHO05D000141 7.9e-07 57.0 79 41.8
Oeu006280.1 Olea europaea HOM05D000220 ORTHO05D000141 7.9e-07 57.0 80 43.8
Sp6g04970 Schrenkiella parvula HOM05D000220 ORTHO05D000141 7.9e-07 57.0 76 42.1
SpUn0055_0010 Schrenkiella parvula HOM05D000220 ORTHO05D000141 7.9e-07 57.0 76 42.1
THA.LOC104813651 Tarenaya hassleriana HOM05D000220 ORTHO05D000141 7.9e-07 57.0 78 46.2
BcaC05g25221 Brassica carinata HOM05D000220 ORTHO05D000141 1.0e-06 56.6 86 43.0
A06p09410 Brassica napus HOM05D000220 ORTHO05D000141 1.0e-06 56.6 86 43.0
BolC5t29851H Brassica oleracea HOM05D000220 ORTHO05D000141 1.0e-06 56.6 86 43.0
BraA06t24125Z Brassica rapa HOM05D000220 ORTHO05D000141 1.0e-06 56.6 86 43.0
Duzib205G0796 Durio zibethinus HOM05D000220 ORTHO05D000141 1.0e-06 56.6 77 41.6
Gohir.A12G148750 Gossypium hirsutum HOM05D000220 ORTHO05D000141 1.0e-06 56.6 63 47.6
Duzib138G0266 Durio zibethinus HOM05D000220 ORTHO05D000141 1.3e-06 56.2 77 40.3
Glyma.09G084900 Glycine max HOM05D000220 ORTHO05D000141 1.3e-06 56.2 67 46.3
Gohir.A12G148725 Gossypium hirsutum HOM05D000220 ORTHO05D000141 1.3e-06 56.2 76 40.8
Gohir.D11G025550 Gossypium hirsutum HOM05D000220 ORTHO05D000141 1.3e-06 56.2 76 40.8
Gorai.011G134600 Gossypium raimondii HOM05D000220 ORTHO05D000141 1.3e-06 56.2 43 53.5
Medtr2g026760 Medicago truncatula HOM05D000220 ORTHO05D000141 1.3e-06 56.2 81 39.5
Peaxi162Scf00102g00118 Petunia axillaris HOM05D000220 ORTHO05D000141 1.3e-06 56.2 79 44.3
Sp1g10770 Schrenkiella parvula HOM05D000220 ORTHO05D000141 1.3e-06 56.2 86 43.0
Sp6g05000 Schrenkiella parvula HOM05D000220 ORTHO05D000141 1.3e-06 56.2 59 50.8
SpUn0055_0040 Schrenkiella parvula HOM05D000220 ORTHO05D000141 1.3e-06 56.2 59 50.8
VMungo0251G0858 Vigna mungo HOM05D000220 ORTHO05D000141 1.3e-06 56.2 76 43.4
AL1G23360 Arabidopsis lyrata HOM05D000220 ORTHO05D000141 1.8e-06 55.8 86 43.0
AT1G12090 Arabidopsis thaliana HOM05D000220 ORTHO05D000141 1.8e-06 55.8 86 43.0
EL10Ac5g13037 Beta vulgaris HOM05D000220 ORTHO05D000141 1.8e-06 55.8 45 57.8
BcaB03g13210 Brassica carinata HOM05D000220 ORTHO05D000141 1.8e-06 55.8 86 43.0
BcaC01g04587 Brassica carinata HOM05D000220 ORTHO05D000141 1.8e-06 55.8 76 40.8
C03p36020 Brassica napus HOM05D000220 ORTHO05D000141 1.8e-06 55.8 76 40.8
C08p15200 Brassica napus HOM05D000220 ORTHO05D000141 1.8e-06 55.8 86 43.0
BolC3t15912H Brassica oleracea HOM05D000220 ORTHO05D000141 1.8e-06 55.8 76 40.8
BolC8t49150H Brassica oleracea HOM05D000220 ORTHO05D000141 1.8e-06 55.8 86 43.0
Carub.0006s3178 Capsella rubella HOM05D000220 ORTHO05D000141 1.8e-06 55.8 61 50.8
CAN.G940.16 Capsicum annuum HOM05D000220 ORTHO05D000141 1.8e-06 55.8 80 37.5
Thhalv10029313m.g Eutrema salsugineum HOM05D000220 ORTHO05D000141 1.8e-06 55.8 76 42.1
HanXRQChr17g0549921 Helianthus annuus HOM05D000220 ORTHO05D000141 1.8e-06 55.8 72 45.8
PGSC0003DMG400015141 Solanum tuberosum HOM05D000220 ORTHO05D000141 1.8e-06 55.8 71 43.7
BcaB03g11731 Brassica carinata HOM05D000220 ORTHO05D000141 2.3e-06 55.5 91 38.5
BcaC03g16269 Brassica carinata HOM05D000220 ORTHO05D000141 2.3e-06 55.5 31 80.6
BcaC03g16270 Brassica carinata HOM05D000220 ORTHO05D000141 2.3e-06 55.5 31 80.6
Cc08_g12780 Coffea canephora HOM05D000220 ORTHO05D000141 2.3e-06 55.5 73 42.5
Oeu011656.1 Olea europaea HOM05D000220 ORTHO05D000141 2.3e-06 55.5 79 44.3
Sed0023827 Sechium edule HOM05D000220 ORTHO05D000141 2.3e-06 55.5 41 58.5
THA.LOC104813626 Tarenaya hassleriana HOM05D000220 ORTHO05D000141 2.3e-06 55.5 40 57.5
Aa31LG6G4510 Aethionema arabicum HOM05D000220 ORTHO05D000141 3.0e-06 55.1 80 40.0
AL7G31160 Arabidopsis lyrata HOM05D000220 ORTHO05D000141 3.0e-06 55.1 41 61.0
Carub.0007s1886 Capsella rubella HOM05D000220 ORTHO05D000141 3.0e-06 55.1 41 61.0
CARHR012450 Cardamine hirsuta HOM05D000220 ORTHO05D000141 3.0e-06 55.1 81 44.4
Thhalv10009061m.g Eutrema salsugineum HOM05D000220 ORTHO05D000141 3.0e-06 55.1 88 42.0
Thhalv10029497m.g Eutrema salsugineum HOM05D000220 ORTHO05D000141 3.0e-06 55.1 59 50.8
Glyma.15G119100 Glycine max HOM05D000220 ORTHO05D000141 3.0e-06 55.1 70 42.9
Peaxi162Scf00045g01313 Petunia axillaris HOM05D000220 ORTHO05D000141 3.0e-06 55.1 81 38.3
SalBow6G5702 Salvia bowleyana HOM05D000220 ORTHO05D000141 3.0e-06 55.1 71 45.1
THA.LOC104823545 Tarenaya hassleriana HOM05D000220 ORTHO05D000141 3.0e-06 55.1 88 39.8
A03p29760 Brassica napus HOM05D000220 ORTHO05D000141 3.9e-06 54.7 74 40.5
BraA03t12168Z Brassica rapa HOM05D000220 ORTHO05D000141 3.9e-06 54.7 74 40.5
CDE02G0221 Ceratophyllum demersum HOM05D000220 ORTHO05D000141 3.9e-06 54.7 77 40.3
CsaV3_3G002880 Cucumis sativus L. HOM05D000220 ORTHO05D000141 3.9e-06 54.7 40 57.5
Glyma.09G014400 Glycine max HOM05D000220 ORTHO05D000141 3.9e-06 54.7 71 42.3
Gohir.D08G189950 Gossypium hirsutum HOM05D000220 ORTHO05D000141 3.9e-06 54.7 79 38.0
Nitab4.5_0000860g0060 Nicotiana tabacum HOM05D000220 ORTHO05D000141 3.9e-06 54.7 81 37.0
Nitab4.5_0003763g0030 Nicotiana tabacum HOM05D000220 ORTHO05D000141 3.9e-06 54.7 81 37.0
Sp6g05010 Schrenkiella parvula HOM05D000220 ORTHO05D000141 3.9e-06 54.7 59 49.2
SpUn0055_0050 Schrenkiella parvula HOM05D000220 ORTHO05D000141 3.9e-06 54.7 59 49.2
THA.LOC104809464 Tarenaya hassleriana HOM05D000220 ORTHO05D000141 3.9e-06 54.7 89 39.3
TPR.G37678 Trifolium pratense HOM05D000220 ORTHO05D000141 3.9e-06 54.7 83 39.8
BcaB01g02637 Brassica carinata HOM05D000220 ORTHO05D000141 5.1e-06 54.3 54 48.1
BcaC02g10441 Brassica carinata HOM05D000220 ORTHO05D000141 5.1e-06 54.3 83 41.0
A03p68040 Brassica napus HOM05D000220 ORTHO05D000141 5.1e-06 54.3 83 41.0
BNapus_Darmor_BZH_scaffold_276p00020 Brassica napus HOM05D000220 ORTHO05D000141 5.1e-06 54.3 83 41.0
C04p28880 Brassica napus HOM05D000220 ORTHO05D000141 5.1e-06 54.3 83 41.0
BolC4t24420H Brassica oleracea HOM05D000220 ORTHO05D000141 5.1e-06 54.3 83 41.0
BraA01t02668Z Brassica rapa HOM05D000220 ORTHO05D000141 5.1e-06 54.3 83 41.0
Carub.0001s1178 Capsella rubella HOM05D000220 ORTHO05D000141 5.1e-06 54.3 84 42.9
Cfa012754 Carpinus fangiana HOM05D000220 ORTHO05D000141 5.1e-06 54.3 41 61.0
Glyma.15G163000 Glycine max HOM05D000220 ORTHO05D000141 5.1e-06 54.3 87 40.2
Nitab4.5_0000312g0330 Nicotiana tabacum HOM05D000220 ORTHO05D000141 5.1e-06 54.3 75 44.0
Psat4g070720 Pisum sativum HOM05D000220 ORTHO05D000141 5.1e-06 54.3 84 40.5
Sp7g20540 Schrenkiella parvula HOM05D000220 ORTHO05D000141 5.1e-06 54.3 41 58.5
GSVIVG01001297001 Vitis vinifera HOM05D000220 ORTHO05D000141 5.1e-06 54.3 56 51.8
AT4G22517 Arabidopsis thaliana HOM05D009876 ORTHO05D012175 6.7e-06 53.9 56 50.0
A08p33010 Brassica napus HOM05D000220 ORTHO05D000141 6.7e-06 53.9 86 41.9
BraA08t35221Z Brassica rapa HOM05D000220 ORTHO05D000141 6.7e-06 53.9 86 41.9
CARHR253640 Cardamine hirsuta HOM05D000220 ORTHO05D000141 6.7e-06 53.9 39 59.0
CARHR253660 Cardamine hirsuta HOM05D000220 ORTHO05D000141 6.7e-06 53.9 59 47.5
Gorai.011G148300 Gossypium raimondii HOM05D000220 ORTHO05D000141 6.7e-06 53.9 38 57.9
Phvul.003G218900 Phaseolus vulgaris HOM05D000220 ORTHO05D000141 6.7e-06 53.9 78 42.3
AT4G12530 Arabidopsis thaliana HOM05D000220 ORTHO05D000141 8.7e-06 53.5 59 47.5
BcaB01g02628 Brassica carinata HOM05D000220 ORTHO05D000141 8.7e-06 53.5 84 35.7
BcaC09g51104 Brassica carinata HOM05D000220 ORTHO05D000141 8.7e-06 53.5 41 58.5
BcaC09g51107 Brassica carinata HOM05D000220 ORTHO05D000141 8.7e-06 53.5 41 58.5
A02p25570 Brassica napus HOM05D000220 ORTHO05D000141 8.7e-06 53.5 25 92.0
A03p23940 Brassica napus HOM05D000220 ORTHO05D000141 8.7e-06 53.5 59 44.1
BraA01t01323Z Brassica rapa HOM05D000220 ORTHO05D000141 8.7e-06 53.5 41 58.5
BraA03t11609Z Brassica rapa HOM05D000220 ORTHO05D000141 8.7e-06 53.5 59 44.1
CARHR229350 Cardamine hirsuta HOM05D000220 ORTHO05D000141 8.7e-06 53.5 41 58.5
CiPaw.11G151900 Carya illinoinensis HOM05D000220 ORTHO05D000141 8.7e-06 53.5 43 53.5
TPR.G37666 Trifolium pratense HOM05D000220 ORTHO05D000141 8.7e-06 53.5 74 40.5


User provided reference genes

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