Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p40170 Brassica napus HOM05D000675 ORTHO05D002086 7.3e-32 139.8 65 100.0
C02p40190 Brassica napus HOM05D000675 ORTHO05D002086 1.5e-29 132.1 64 95.3
C07p02590 Brassica napus HOM05D000675 ORTHO05D002086 3.5e-26 120.9 64 89.1
BolC7t40657H Brassica oleracea HOM05D000675 ORTHO05D002086 3.5e-26 120.9 64 89.1
BolC5t32014H Brassica oleracea HOM05D000675 ORTHO05D002086 1.3e-25 119.0 64 87.5
BolC5t33356H Brassica oleracea HOM05D000675 ORTHO05D002086 8.7e-25 116.3 64 84.4
BolC2t10044H Brassica oleracea HOM05D009067 ORTHO05D010543 1.1e-24 115.9 64 87.5
A03p66350 Brassica napus HOM05D000675 ORTHO05D002086 1.9e-24 115.2 64 82.8
C01p33410 Brassica napus HOM05D000675 ORTHO05D002086 1.1e-22 109.4 71 76.1
BraA01t02721Z Brassica rapa HOM05D000675 ORTHO05D002086 3.4e-21 104.4 71 73.2
C02p40160 Brassica napus HOM05D000675 ORTHO05D002086 4.5e-21 104.0 64 79.7
BcaC06g36588 Brassica carinata HOM05D000675 ORTHO05D002086 3.2e-19 97.8 56 83.9
C02p48400 Brassica napus HOM05D000675 ORTHO05D002086 4.2e-19 97.4 61 73.8
A06p23400 Brassica napus HOM05D000675 ORTHO05D002086 1.2e-18 95.9 64 68.8
C04p26820 Brassica napus HOM05D000675 ORTHO05D002086 1.6e-18 95.5 61 72.1
BolC2t09674H Brassica oleracea HOM05D000675 ORTHO05D002086 1.5e-16 89.0 61 67.2
BolC2t10045H Brassica oleracea HOM05D009067 ORTHO05D010543 6.3e-15 83.6 44 90.9
BolC3t15504H Brassica oleracea HOM05D000675 ORTHO05D032797 2.4e-14 81.6 60 61.7
C03p31610 Brassica napus HOM05D000675 ORTHO05D032797 3.1e-14 81.3 60 61.7
C09p56350 Brassica napus HOM05D000675 ORTHO05D002086 6.9e-14 80.1 61 60.7
BraA04t16110Z Brassica rapa HOM05D000675 ORTHO05D002086 6.9e-14 80.1 61 67.2
CARHR044830 Cardamine hirsuta HOM05D000675 ORTHO05D002086 1.0e-12 76.3 60 56.7
Aa31sc290G10 Aethionema arabicum HOM05D000675 ORTHO05D002086 3.8e-12 74.3 61 49.2
Aa31sc36G130 Aethionema arabicum HOM05D000675 ORTHO05D002086 3.8e-12 74.3 61 49.2
Aa31sc83G10 Aethionema arabicum HOM05D000675 ORTHO05D002086 3.8e-12 74.3 61 49.2
CARHR148640 Cardamine hirsuta HOM05D000675 ORTHO05D002086 3.8e-12 74.3 67 52.2
BolC5t32956H Brassica oleracea HOM05D009067 ORTHO05D010543 6.5e-12 73.6 47 68.1
BcaB01g01312 Brassica carinata HOM05D000675 ORTHO05D003044 8.4e-12 73.2 64 48.4
Aa31sc60G80 Aethionema arabicum HOM05D000675 ORTHO05D002086 1.4e-11 72.4 61 47.5
C05p42270 Brassica napus HOM05D004416 ORTHO05D005439 1.4e-11 72.4 52 63.5
CARHR151940 Cardamine hirsuta HOM05D000675 ORTHO05D002086 1.4e-11 72.4 67 50.7
Aa31LG1G6150 Aethionema arabicum HOM05D000611 ORTHO05D002086 7.2e-11 70.1 61 47.5
Aa31LG9G7620 Aethionema arabicum HOM05D000675 ORTHO05D002086 9.3e-11 69.7 61 47.5
BraA03t15561Z Brassica rapa HOM05D000675 ORTHO05D002086 9.3e-11 69.7 41 70.7
Aa31LG9G4860 Aethionema arabicum HOM05D000675 ORTHO05D002086 1.2e-10 69.3 61 47.5
Carub.0008s1552 Capsella rubella HOM05D000675 ORTHO05D002086 1.2e-10 69.3 63 52.4
BolC3t15422H Brassica oleracea HOM05D001308 ORTHO05D001170 1.6e-10 68.9 41 68.3
BcaC03g17481 Brassica carinata HOM05D000675 ORTHO05D002086 2.1e-10 68.6 64 45.3
AT4G04775 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 3.5e-10 67.8 59 52.5
AT5G15690 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 3.5e-10 67.8 59 52.5
A04p09970 Brassica napus HOM05D000675 ORTHO05D024350 4.6e-10 67.4 63 47.6
BraA04t16658Z Brassica rapa HOM05D000675 ORTHO05D024350 4.6e-10 67.4 63 47.6
C03p30730 Brassica napus HOM05D001308 ORTHO05D001170 1.0e-09 66.2 41 65.9
C06p13560 Brassica napus HOM05D000675 ORTHO05D032734 1.0e-09 66.2 63 46.0
BcaB04g19467 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-09 65.9 64 45.3
Aa31sc689G30 Aethionema arabicum HOM05D000675 ORTHO05D002086 2.3e-09 65.1 49 51.0
BcaB04g18178 Brassica carinata HOM05D000675 ORTHO05D011634 2.3e-09 65.1 64 48.4
BraA07t27944Z Brassica rapa HOM05D000675 ORTHO05D002086 2.3e-09 65.1 33 87.9
CARHR102470 Cardamine hirsuta HOM05D000675 ORTHO05D002086 2.3e-09 65.1 67 47.8
C05p14140 Brassica napus HOM05D000675 ORTHO05D024350 3.0e-09 64.7 63 47.6
BolC5t30145H Brassica oleracea HOM05D000675 ORTHO05D024350 3.0e-09 64.7 63 47.6
CARHR152130 Cardamine hirsuta HOM05D000675 ORTHO05D002086 3.0e-09 64.7 62 53.2
CARHR293330 Cardamine hirsuta HOM05D000675 ORTHO05D002086 3.0e-09 64.7 67 46.3
Aa31LG2G17470 Aethionema arabicum HOM05D000675 ORTHO05D002086 3.9e-09 64.3 61 44.3
CARHR216410 Cardamine hirsuta HOM05D000675 ORTHO05D002086 3.9e-09 64.3 65 46.2
BcaC08g43955 Brassica carinata HOM05D000675 ORTHO05D032734 6.7e-09 63.5 63 46.0
A10p08130 Brassica napus HOM05D040381 ORTHO05D002086 6.7e-09 63.5 43 65.1
C01p31580 Brassica napus HOM05D000675 ORTHO05D013510 6.7e-09 63.5 64 45.3
BolC6t36520H Brassica oleracea HOM05D000675 ORTHO05D032734 6.7e-09 63.5 63 46.0
BolC1t03092H Brassica oleracea HOM05D000675 ORTHO05D003044 1.1e-08 62.8 64 43.8
BcaC01g04356 Brassica carinata HOM05D000675 ORTHO05D002086 1.5e-08 62.4 46 54.3
BcaC05g25361 Brassica carinata HOM05D000675 ORTHO05D002086 1.5e-08 62.4 46 54.3
Aa31LG2G16780 Aethionema arabicum HOM05D000675 ORTHO05D015807 1.9e-08 62.0 49 46.9
BcaC05g25610 Brassica carinata HOM05D000675 ORTHO05D024350 1.9e-08 62.0 63 46.0
BolC5t32262H Brassica oleracea HOM05D000675 ORTHO05D015807 1.9e-08 62.0 71 43.7
BcaB03g15657 Brassica carinata HOM05D000675 ORTHO05D002086 2.5e-08 61.6 46 54.3
BcaNung03744 Brassica carinata HOM05D000675 ORTHO05D002086 2.5e-08 61.6 62 48.4
BolC7t40832H Brassica oleracea HOM05D000675 ORTHO05D032634 2.5e-08 61.6 64 43.8
BcaB05g24191 Brassica carinata HOM05D000675 ORTHO05D002086 3.3e-08 61.2 46 56.5
Aa31LG3G7250 Aethionema arabicum HOM05D000675 ORTHO05D002086 4.3e-08 60.8 61 42.6
Aa31LG5G22970 Aethionema arabicum HOM05D012680 ORTHO05D002086 4.3e-08 60.8 61 42.6
BcaC02g11404 Brassica carinata HOM05D000675 ORTHO05D002086 5.7e-08 60.5 46 54.3
BolC9t56385H Brassica oleracea HOM05D000675 ORTHO05D002086 5.7e-08 60.5 64 48.4
CARHR113850 Cardamine hirsuta HOM05D000675 ORTHO05D002086 5.7e-08 60.5 64 43.8
BcaC05g25703 Brassica carinata HOM05D000675 ORTHO05D002086 7.4e-08 60.1 51 49.0
BcaC08g42855 Brassica carinata HOM05D000675 ORTHO05D002086 7.4e-08 60.1 51 49.0
Aa31sc167G10 Aethionema arabicum HOM05D000675 ORTHO05D002086 9.7e-08 59.7 53 49.1
BcaB05g21895 Brassica carinata HOM05D000675 ORTHO05D002086 9.7e-08 59.7 46 54.3
BcaB05g22219 Brassica carinata HOM05D000675 ORTHO05D002086 9.7e-08 59.7 46 54.3
BcaB03g14368 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-07 59.3 46 54.3
BcaC09g49807 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-07 59.3 46 54.3
BcaC03g15594 Brassica carinata HOM05D000675 ORTHO05D002086 1.6e-07 58.9 51 49.0
BcaC01g01919 Brassica carinata HOM05D000675 ORTHO05D002086 2.2e-07 58.5 61 45.9
BcaC05g27596 Brassica carinata HOM05D000675 ORTHO05D002086 2.2e-07 58.5 51 47.1
BcaC08g43982 Brassica carinata HOM05D000675 ORTHO05D002086 2.2e-07 58.5 61 45.9
BolC6t36565H Brassica oleracea HOM05D000675 ORTHO05D002086 2.2e-07 58.5 61 45.9
BcaB04g18535 Brassica carinata HOM05D000675 ORTHO05D002086 2.8e-07 58.2 46 47.8
BcaB08g34481 Brassica carinata HOM05D000675 ORTHO05D002086 2.8e-07 58.2 46 50.0
BcaC09g48980 Brassica carinata HOM05D000675 ORTHO05D002086 2.8e-07 58.2 51 47.1
BcaC09g48982 Brassica carinata HOM05D000675 ORTHO05D002086 2.8e-07 58.2 51 47.1
C07p04360 Brassica napus HOM05D000675 ORTHO05D032634 2.8e-07 58.2 64 42.2
BolC3t17569H Brassica oleracea HOM05D000675 ORTHO05D002086 2.8e-07 58.2 61 47.5
BcaC05g28481 Brassica carinata HOM05D000675 ORTHO05D002086 3.7e-07 57.8 51 47.1
BcaC08g44362 Brassica carinata HOM05D000675 ORTHO05D002086 3.7e-07 57.8 46 47.8
BolC6t36479H Brassica oleracea HOM05D000977 ORTHO05D001094 3.7e-07 57.8 46 52.2
BcaC02g09935 Brassica carinata HOM05D000675 ORTHO05D002086 4.8e-07 57.4 61 44.3
BcaC03g16220 Brassica carinata HOM05D000675 ORTHO05D002086 4.8e-07 57.4 45 53.3
BcaC05g28255 Brassica carinata HOM05D000675 ORTHO05D002086 4.8e-07 57.4 45 53.3
BcaC06g36214 Brassica carinata HOM05D000675 ORTHO05D002086 4.8e-07 57.4 45 53.3
BcaC08g42985 Brassica carinata HOM05D000675 ORTHO05D002086 4.8e-07 57.4 61 44.3
C01p42300 Brassica napus HOM05D000675 ORTHO05D002086 4.8e-07 57.4 61 44.3
BcaC03g17205 Brassica carinata HOM05D000675 ORTHO05D002086 6.3e-07 57.0 46 52.2
BcaC05g27351 Brassica carinata HOM05D000675 ORTHO05D002086 6.3e-07 57.0 46 52.2
BcaC08g43893 Brassica carinata HOM05D000675 ORTHO05D002086 6.3e-07 57.0 61 44.3
BcaC09g49398 Brassica carinata HOM05D000977 ORTHO05D001094 6.3e-07 57.0 61 44.3
BcaC09g50385 Brassica carinata HOM05D000675 ORTHO05D002086 6.3e-07 57.0 46 52.2
C06p12790 Brassica napus HOM05D000675 ORTHO05D002086 6.3e-07 57.0 61 44.3
BolC2t11221H Brassica oleracea HOM05D000675 ORTHO05D002086 6.3e-07 57.0 46 52.2
BcaC04g22824 Brassica carinata HOM05D000675 ORTHO05D002086 8.2e-07 56.6 45 51.1
C04p44900 Brassica napus HOM05D000675 ORTHO05D002086 8.2e-07 56.6 61 45.9
BolC6t36907H Brassica oleracea HOM05D040381 ORTHO05D104258 8.2e-07 56.6 26 96.2
BcaB07g32893 Brassica carinata HOM05D000675 ORTHO05D002086 1.1e-06 56.2 45 53.3
BcaC05g29076 Brassica carinata HOM05D000675 ORTHO05D032634 1.1e-06 56.2 48 45.8
A05p16290 Brassica napus HOM05D000675 ORTHO05D002086 1.1e-06 56.2 61 44.3
BolC2t09536H Brassica oleracea HOM05D000675 ORTHO05D002086 1.1e-06 56.2 47 48.9
BolC4t25850H Brassica oleracea HOM05D000675 ORTHO05D002086 1.1e-06 56.2 46 47.8
BcaC03g14558 Brassica carinata HOM05D000675 ORTHO05D002086 1.4e-06 55.8 61 39.3
BcaC06g35799 Brassica carinata HOM05D000675 ORTHO05D002086 1.4e-06 55.8 61 42.6
C09p27150 Brassica napus HOM05D000675 ORTHO05D002086 1.4e-06 55.8 61 45.9
BolC6t36439H Brassica oleracea HOM05D000675 ORTHO05D002086 1.4e-06 55.8 61 44.3
BcaB01g01913 Brassica carinata HOM05D000675 ORTHO05D002086 1.8e-06 55.5 46 45.7
BcaB01g03291 Brassica carinata HOM05D000675 ORTHO05D002086 1.8e-06 55.5 46 50.0
BcaB08g35730 Brassica carinata HOM05D000675 ORTHO05D002086 1.8e-06 55.5 46 50.0
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 2.4e-06 55.1 64 40.6
BcaC06g34450 Brassica carinata HOM05D000675 ORTHO05D002086 2.4e-06 55.1 47 48.9
C06p13230 Brassica napus HOM05D000675 ORTHO05D032924 2.4e-06 55.1 64 39.1
C06p13860 Brassica napus HOM05D000675 ORTHO05D002086 2.4e-06 55.1 61 44.3
BcaC02g09889 Brassica carinata HOM05D000675 ORTHO05D002086 4.1e-06 54.3 61 44.3
BolC6t36481H Brassica oleracea HOM05D000675 ORTHO05D032924 5.3e-06 53.9 64 39.1
CARHR104020 Cardamine hirsuta HOM05D000675 ORTHO05D002086 5.3e-06 53.9 56 44.6
CARHR257150 Cardamine hirsuta HOM05D000675 ORTHO05D002086 5.3e-06 53.9 64 35.9
BcaB04g17253 Brassica carinata HOM05D000977 ORTHO05D001094 9.0e-06 53.1 45 48.9
CARHR118340 Cardamine hirsuta HOM05D000675 ORTHO05D002086 9.0e-06 53.1 41 48.8


User provided reference genes

Program Settings