Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p39580 Brassica napus HOM05D009523 ORTHO05D000721 1.3e-102 376.3 182 100.0
A02p25000 Brassica napus HOM05D009523 ORTHO05D000721 3.2e-101 371.7 182 98.9
BraA02t07489Z Brassica rapa HOM05D009523 ORTHO05D000721 2.7e-100 368.6 182 98.4
BcaC03g16182 Brassica carinata HOM05D009523 ORTHO05D000721 3.0e-99 365.2 182 97.3
BolC2t09971H Brassica oleracea HOM05D009523 ORTHO05D000721 3.0e-99 365.2 182 97.3
BcaB05g23666 Brassica carinata HOM05D009523 ORTHO05D000721 5.5e-85 317.8 186 86.6
Thhalv10029004m.g Eutrema salsugineum HOM05D009523 ORTHO05D000721 2.7e-79 298.9 185 81.1
AL6G50100 Arabidopsis lyrata HOM05D009523 ORTHO05D000721 5.5e-77 291.2 186 79.6
Sp6g02860 Schrenkiella parvula HOM05D009523 ORTHO05D000721 3.4e-74 282.0 187 76.5
AT4G02830 Arabidopsis thaliana HOM05D009523 ORTHO05D000721 3.7e-73 278.5 187 77.5
CARHR251200 Cardamine hirsuta HOM05D009523 ORTHO05D000721 1.5e-69 266.5 187 74.3
Carub.0006s3422 Capsella rubella HOM05D009523 ORTHO05D000721 1.3e-65 253.4 186 72.6
A03p30820 Brassica napus HOM05D009523 ORTHO05D000721 1.6e-60 236.5 185 69.7
C03p37500 Brassica napus HOM05D009523 ORTHO05D000721 1.4e-59 233.4 185 69.2
BolC3t16043H Brassica oleracea HOM05D009523 ORTHO05D000721 2.3e-59 232.6 194 66.5
BraA03t12260Z Brassica rapa HOM05D009523 ORTHO05D000721 6.8e-59 231.1 188 68.6
BcaC01g06726 Brassica carinata HOM05D009523 ORTHO05D000721 2.3e-54 216.1 185 65.4
Aa31LG5G2410 Aethionema arabicum HOM05D009523 ORTHO05D000721 8.9e-51 204.1 184 60.3
THA.LOC104825998 Tarenaya hassleriana HOM05D009523 ORTHO05D000721 5.4e-24 115.2 146 48.6
A09p02220 Brassica napus HOM05D009523 ORTHO05D000721 7.1e-24 114.8 157 47.8
BraA09t35871Z Brassica rapa HOM05D009523 ORTHO05D000721 7.1e-24 114.8 157 47.8
C09p02310 Brassica napus HOM05D009523 ORTHO05D000721 2.1e-23 113.2 157 47.8
BolC9t53159H Brassica oleracea HOM05D009523 ORTHO05D000721 2.1e-23 113.2 157 47.8
BcaC04g24018 Brassica carinata HOM05D009523 ORTHO05D000721 3.9e-22 109.0 155 47.1
Thecc.01G280100 Theobroma cacao HOM05D001128 ORTHO05D000721 1.2e-18 97.4 193 38.9
Hund05343 Selenicereus undatus HOM05D001128 ORTHO05D000721 3.4e-18 95.9 193 37.3
Gohir.D08G204000 Gossypium hirsutum HOM05D009523 ORTHO05D000721 4.5e-18 95.5 182 39.6
Duzib138G1095 Durio zibethinus HOM05D001128 ORTHO05D000721 7.6e-18 94.7 187 40.1
MD11G1286400 Malus domestica HOM05D001128 ORTHO05D000721 7.6e-18 94.7 191 38.2
Gorai.004G216000 Gossypium raimondii HOM05D009523 ORTHO05D000721 9.9e-18 94.4 182 39.6
Gorai.004G080700 Gossypium raimondii HOM05D001128 ORTHO05D000721 1.7e-17 93.6 194 38.1
Prupe.8G241700 Prunus persica HOM05D001128 ORTHO05D000721 3.8e-17 92.4 192 36.5
Glyma.19G155600 Glycine max HOM05D001128 ORTHO05D000721 8.4e-17 91.3 194 37.6
Gohir.A08G185900 Gossypium hirsutum HOM05D009523 ORTHO05D000721 3.2e-16 89.4 182 38.5
Glyma.03G153200 Glycine max HOM05D001128 ORTHO05D000721 4.2e-16 89.0 195 35.9
Cpa.g.sc52.31 Carica papaya HOM05D001128 ORTHO05D000721 9.3e-16 87.8 181 38.7
Atru.chr5.1430 Acer truncatum HOM05D001128 ORTHO05D000721 1.2e-15 87.4 192 36.5
Ciclev10023667m.g Citrus clementina HOM05D001128 ORTHO05D000721 1.3e-14 84.0 190 38.9
Gohir.D08G076400 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.3e-14 84.0 191 35.1
Lj1g0006514 Lotus japonicus HOM05D001128 ORTHO05D000721 3.0e-14 82.8 183 35.5
Potri.005G208800 Populus trichocarpa HOM05D001128 ORTHO05D000721 3.0e-14 82.8 200 37.0
QL12p021963 Quercus lobata HOM05D001128 ORTHO05D000721 3.9e-14 82.4 193 35.2
Glyma.02G147700 Glycine max HOM05D001128 ORTHO05D000721 6.7e-14 81.6 196 34.7
Sc17g0004110 Simmondsia chinensis HOM05D001128 ORTHO05D000721 8.7e-14 81.3 194 36.6
arahy.Tifrunner.gnm1.ann1.S3CEFB Arachis hypogaea HOM05D001128 ORTHO05D000721 1.1e-13 80.9 146 41.1
CiPaw.08G105000 Carya illinoinensis HOM05D001128 ORTHO05D000721 1.1e-13 80.9 119 47.9
MD03G1266000 Malus domestica HOM05D001128 ORTHO05D000721 1.1e-13 80.9 186 36.6
Dinv32942 Davidia involucrata HOM05D001128 ORTHO05D000721 2.5e-13 79.7 187 38.0
Potri.002G053700 Populus trichocarpa HOM05D001128 ORTHO05D000721 2.5e-13 79.7 188 36.2
Lalb_Chr06g0163041 Lupinus albus HOM05D001128 ORTHO05D000721 4.3e-13 79.0 197 33.5
Phvul.001G150600 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 4.3e-13 79.0 192 32.3
FvH4_2g23650 Fragaria vesca HOM05D001128 ORTHO05D000721 5.6e-13 78.6 197 36.0
Manes.01G208200 Manihot esculenta HOM05D001128 ORTHO05D000721 5.6e-13 78.6 191 36.6
FAN24G2693 Fragaria x ananassa HOM05D001128 ORTHO05D000721 7.4e-13 78.2 197 36.0
QL12p021827 Quercus lobata HOM05D001128 ORTHO05D000721 7.4e-13 78.2 183 34.4
Sabra05G0158900 Salix brachista HOM05D001128 ORTHO05D000721 9.6e-13 77.8 135 43.0
HanXRQChr01g0003181 Helianthus annuus HOM05D001128 ORTHO05D000721 1.3e-12 77.4 191 36.6
Gohir.A08G067900 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.6e-12 77.0 137 40.1
Migut.D00291 Erythranthe guttata HOM05D001128 ORTHO05D000721 2.1e-12 76.6 148 40.5
GSVIVG01011088001 Vitis vinifera HOM05D001128 ORTHO05D000721 2.1e-12 76.6 233 32.2
Glyma.10G026100 Glycine max HOM05D001128 ORTHO05D000721 2.8e-12 76.3 199 33.2
PGR044G1404 Punica granatum HOM05D001128 ORTHO05D000721 2.8e-12 76.3 132 43.2
RcHm_v2.0_Chr6g0291121 Rosa chinensis HOM05D001128 ORTHO05D000721 2.8e-12 76.3 191 36.6
SalBow4G1333 Salvia bowleyana HOM05D001128 ORTHO05D000721 3.6e-12 75.9 116 45.7
Phvul.007G171600 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 4.8e-12 75.5 197 34.0
Lsat_1_v5_gn_5_188320 Lactuca sativa HOM05D001128 ORTHO05D000721 6.2e-12 75.1 172 37.2
Psat6g060440 Pisum sativum HOM05D001128 ORTHO05D000721 6.2e-12 75.1 197 34.0
Sabra02G0043700 Salix brachista HOM05D001128 ORTHO05D000721 8.1e-12 74.7 200 36.0
COL.COLO4_09103 Corchorus olitorius HOM05D005331 ORTHO05D007596 1.1e-11 74.3 145 40.0
FAN15G2738 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.1e-11 74.3 194 35.1
FAN20G0154 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.4e-11 73.9 193 34.7
VMungo0720G0300 Vigna mungo HOM05D001128 ORTHO05D000721 1.4e-11 73.9 196 33.2
FAN27G0408 Fragaria x ananassa HOM05D001128 ORTHO05D000721 2.4e-11 73.2 175 36.6
TAR633G0329 Trochodendron aralioides HOM05D001128 ORTHO05D000721 2.4e-11 73.2 198 36.9
Duzib211G0347 Durio zibethinus HOM05D001128 ORTHO05D000721 3.1e-11 72.8 209 34.4
Haze_04722 Corylus avellana HOM05D001128 ORTHO05D000721 4.0e-11 72.4 146 37.7
CANSAT25G3618 Cannabis sativa HOM05D001128 ORTHO05D000721 5.3e-11 72.0 186 34.4
Nn4g26238 Nelumbo nucifera HOM05D001128 ORTHO05D000721 5.3e-11 72.0 202 33.7
Aqoxy2G03314 Aquilegia oxysepala HOM05D001128 ORTHO05D000721 1.2e-10 70.9 204 31.4
SGA_v2.0_scaffold1G00467 Striga asiatica HOM05D001128 ORTHO05D000721 2.6e-10 69.7 126 40.5
PSO541G6419 Papaver somniferum HOM05D001128 ORTHO05D000721 3.4e-10 69.3 228 31.6
Actinidia21110 Actinidia chinensis HOM05D001128 ORTHO05D000721 5.8e-10 68.6 131 38.9
Manes.05G075700 Manihot esculenta HOM05D001128 ORTHO05D000721 5.8e-10 68.6 192 33.3
Nn1g02211 Nelumbo nucifera HOM05D001128 ORTHO05D000721 7.6e-10 68.2 200 34.5
Peaxi162Scf01622g00014 Petunia axillaris HOM05D001128 ORTHO05D000721 1.3e-09 67.4 181 34.3
Medtr1g072310 Medicago truncatula HOM05D001128 ORTHO05D000721 1.7e-09 67.0 195 33.3
Oeu028076.1 Olea europaea HOM05D001128 ORTHO05D000721 4.9e-09 65.5 180 35.6
Oeu028077.1 Olea europaea HOM05D001128 ORTHO05D000721 1.1e-08 64.3 179 34.1
TPR.G9121 Trifolium pratense HOM05D001128 ORTHO05D000721 1.1e-08 64.3 198 32.8
CsaV3_7G028180 Cucumis sativus L. HOM05D001128 ORTHO05D000721 1.4e-08 63.9 204 32.8
Eucgr.K03372 Eucalyptus grandis HOM05D001128 ORTHO05D000721 1.4e-08 63.9 122 39.3
PSO675G1334 Papaver somniferum HOM05D001128 ORTHO05D000721 1.9e-08 63.5 123 39.8
ClCG09G006980 Citrullus lanatus HOM05D001128 ORTHO05D000721 3.2e-08 62.8 178 35.4
Rhsim01G0275000 Rhododendron simsii HOM05D005331 ORTHO05D007596 3.2e-08 62.8 111 44.1
MELO3C015842.2 Cucumis melo HOM05D001128 ORTHO05D000721 4.2e-08 62.4 203 33.5
Actinidia24889 Actinidia chinensis HOM05D000300 ORTHO05D000383 5.5e-08 62.0 147 38.1
Sed0019989 Sechium edule HOM05D001128 ORTHO05D000721 5.5e-08 62.0 174 35.6
Sed0025256 Sechium edule HOM05D001128 ORTHO05D000721 5.5e-08 62.0 126 38.9
MSTRG.21564 Avicennia marina HOM05D001128 ORTHO05D000721 1.2e-07 60.8 71 57.7
SGA_v2.0_scaffold11G05806 Striga asiatica HOM05D009523 ORTHO05D000721 2.1e-07 60.1 73 52.1
PSO384G2375 Papaver somniferum HOM05D001128 ORTHO05D000721 2.7e-07 59.7 140 34.3
PSO339G4622 Papaver somniferum HOM05D001128 ORTHO05D000721 3.5e-07 59.3 140 34.3
Zm00001eb147910 Zea mays HOM05D001128 ORTHO05D000721 3.5e-07 59.3 108 41.7
HPP92_026966 Vanilla planifolia HOM05D001128 ORTHO05D000721 4.6e-07 58.9 108 42.6
MSTRG.10240 Avicennia marina HOM05D001128 ORTHO05D000721 1.0e-06 57.8 128 37.5
Sabra06G0070700 Salix brachista HOM05D001128 ORTHO05D000721 1.0e-06 57.8 151 34.4
HPP92_018175 Vanilla planifolia HOM05D001128 ORTHO05D000721 1.3e-06 57.4 120 41.7
Ciclev10011799m.g Citrus clementina HOM05D001128 ORTHO05D000721 2.3e-06 56.6 120 38.3
Glyma.07G141000 Glycine max HOM05D001128 ORTHO05D000721 3.0e-06 56.2 131 36.6
Os01g0850000 Oryza sativa ssp. japonica HOM05D001128 ORTHO05D000721 3.0e-06 56.2 92 44.6
Sopen09g006510 Solanum pennellii HOM05D001128 ORTHO05D000721 3.0e-06 56.2 210 31.0
Sed0023317 Sechium edule HOM05D001128 ORTHO05D000721 3.9e-06 55.8 129 37.2
Cpa.g.sc56.66 Carica papaya HOM05D001128 ORTHO05D000721 5.1e-06 55.5 118 39.8
Dinv44522 Davidia involucrata HOM05D009523 ORTHO05D000721 5.1e-06 55.5 70 47.1
Actinidia29161 Actinidia chinensis HOM05D001128 ORTHO05D000721 6.7e-06 55.1 146 36.3
Solyc09g011690.4 Solanum lycopersicum HOM05D001128 ORTHO05D000721 6.7e-06 55.1 210 31.0


User provided reference genes

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