Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p39520 Brassica napus HOM05D000103 ORTHO05D012717 1.8e-57 225.7 116 100.0
C02p39540 Brassica napus HOM05D000103 ORTHO05D012717 3.7e-50 201.4 138 80.4
BolC2t09967H Brassica oleracea HOM05D000103 ORTHO05D012717 3.7e-50 201.4 138 80.4
BcaC03g16178 Brassica carinata HOM05D000103 ORTHO05D012717 3.3e-35 151.8 112 75.9
BcaB01g03147 Brassica carinata HOM05D000103 ORTHO05D000049 2.8e-34 148.7 112 75.0
C03p31170 Brassica napus HOM05D000103 ORTHO05D000049 2.8e-34 148.7 112 75.0
BolC3t15464H Brassica oleracea HOM05D000103 ORTHO05D000049 2.8e-34 148.7 112 75.0
A03p26130 Brassica napus HOM05D000103 ORTHO05D000049 1.4e-33 146.4 112 74.1
BraA03t11828Z Brassica rapa HOM05D000103 ORTHO05D000049 1.4e-33 146.4 112 74.1
BolC2t09965H Brassica oleracea HOM05D000103 ORTHO05D012717 1.8e-33 146.0 76 98.7
BcaC01g05009 Brassica carinata HOM05D000103 ORTHO05D000049 1.5e-32 142.9 112 73.2
C08p36550 Brassica napus HOM05D000103 ORTHO05D012717 1.7e-31 139.4 112 71.4
BolC8t51237H Brassica oleracea HOM05D000103 ORTHO05D012717 1.7e-31 139.4 112 71.4
Sp4g12500 Schrenkiella parvula HOM05D000103 ORTHO05D000049 1.5e-30 136.3 116 69.0
BcaC02g08066 Brassica carinata HOM05D000103 ORTHO05D000049 1.9e-30 136.0 117 68.4
C04p58820 Brassica napus HOM05D000103 ORTHO05D000049 1.9e-30 136.0 117 68.4
BolC4t27400H Brassica oleracea HOM05D000103 ORTHO05D000049 1.9e-30 136.0 117 68.4
BcaB06g28330 Brassica carinata HOM05D000103 ORTHO05D000049 4.2e-30 134.8 116 69.0
A04p22660 Brassica napus HOM05D000103 ORTHO05D000049 4.2e-30 134.8 117 67.5
BraA04t17809Z Brassica rapa HOM05D000103 ORTHO05D000049 4.2e-30 134.8 117 67.5
AT2G29940 Arabidopsis thaliana HOM05D000103 ORTHO05D000049 8.0e-29 130.6 116 66.4
Thhalv10016143m.g Eutrema salsugineum HOM05D000103 ORTHO05D000049 1.8e-28 129.4 116 65.5
AL4G24670 Arabidopsis lyrata HOM05D000103 ORTHO05D000049 3.3e-27 125.2 116 64.7
Carub.0004s1102 Capsella rubella HOM05D000103 ORTHO05D000049 9.7e-27 123.6 117 62.4
Aa31LG5G6750 Aethionema arabicum HOM05D000103 ORTHO05D000049 9.1e-25 117.1 115 60.9
CARHR123160 Cardamine hirsuta HOM05D000103 ORTHO05D000049 2.0e-24 115.9 116 61.2
C04p63440 Brassica napus HOM05D000103 ORTHO05D012717 4.5e-24 114.8 65 92.3
C07p58340 Brassica napus HOM05D000103 ORTHO05D012717 2.2e-23 112.5 64 92.2
PSO017G1397 Papaver somniferum HOM05D000103 ORTHO05D000049 1.5e-14 83.2 112 45.5
MD11G1075100 Malus domestica HOM05D000103 ORTHO05D000049 2.5e-14 82.4 112 46.4
PSO478G2414 Papaver somniferum HOM05D000103 ORTHO05D000049 9.4e-14 80.5 112 44.6
Cpa.g.sc112.27 Carica papaya HOM05D000103 ORTHO05D000049 3.6e-13 78.6 114 43.9
Dinv28638 Davidia involucrata HOM05D000103 ORTHO05D000049 4.7e-13 78.2 109 44.0
Lj1A138T77 Lonicera japonica HOM05D000103 ORTHO05D012717 4.7e-13 78.2 110 48.2
Aqoxy4G02587 Aquilegia oxysepala HOM05D000103 ORTHO05D000049 1.4e-12 76.6 107 50.5
CANSAT54G1913 Cannabis sativa HOM05D000103 ORTHO05D000049 4.0e-12 75.1 106 47.2
Duzib170G1142 Durio zibethinus HOM05D000103 ORTHO05D000049 5.2e-12 74.7 111 47.7
PGR119G1012 Punica granatum HOM05D000103 ORTHO05D000049 8.8e-12 73.9 110 46.4
TWI79G0564 Tripterygium wilfordii HOM05D000103 ORTHO05D000049 2.0e-11 72.8 112 40.2
unitig_26.g10206 Utricularia gibba HOM05D000103 ORTHO05D000049 2.0e-11 72.8 110 44.5
Potri.001G251100 Populus trichocarpa HOM05D000103 ORTHO05D000049 3.4e-11 72.0 115 39.1
Actinidia16092 Actinidia chinensis HOM05D000103 ORTHO05D000049 4.4e-11 71.6 110 40.0
Migut.N00795 Erythranthe guttata HOM05D000103 ORTHO05D000049 5.7e-11 71.2 110 43.6
Lj2A1082G51 Lonicera japonica HOM05D000103 ORTHO05D012717 9.8e-11 70.5 110 42.7
Prupe.6G057900 Prunus persica HOM05D000103 ORTHO05D000049 9.8e-11 70.5 112 44.6
Ciclev10027679m.g Citrus clementina HOM05D000103 ORTHO05D000049 1.3e-10 70.1 108 40.7
MELO3C025851.2 Cucumis melo HOM05D000103 ORTHO05D000049 1.3e-10 70.1 113 46.0
SGA_v2.0_scaffold120G32915 Striga asiatica HOM05D000103 ORTHO05D000049 1.3e-10 70.1 111 38.7
ClCG02G019560 Citrullus lanatus HOM05D000103 ORTHO05D000049 1.7e-10 69.7 113 43.4
Rhsim13G0069800 Rhododendron simsii HOM05D000103 ORTHO05D000049 1.7e-10 69.7 110 41.8
Sabra16G0152700 Salix brachista HOM05D000103 ORTHO05D000049 1.7e-10 69.7 115 40.9
CsaV3_6G016230 Cucumis sativus L. HOM05D000103 ORTHO05D000049 2.8e-10 68.9 114 43.0
Eucgr.J01914 Eucalyptus grandis HOM05D000103 ORTHO05D000049 2.8e-10 68.9 111 43.2
Nn2g11474 Nelumbo nucifera HOM05D000103 ORTHO05D000049 2.8e-10 68.9 112 43.8
Thecc.09G302200 Theobroma cacao HOM05D000103 ORTHO05D000049 3.7e-10 68.6 114 41.2
FAN16G0120 Fragaria x ananassa HOM05D000103 ORTHO05D000049 4.8e-10 68.2 99 43.4
QL01p038139 Quercus lobata HOM05D000103 ORTHO05D012717 4.8e-10 68.2 110 42.7
FvH4_3g38510 Fragaria vesca HOM05D000103 ORTHO05D000049 6.3e-10 67.8 99 43.4
FAN11G1065 Fragaria x ananassa HOM05D000103 ORTHO05D000049 6.3e-10 67.8 99 43.4
Eucgr.E03908 Eucalyptus grandis HOM05D000103 ORTHO05D000049 8.3e-10 67.4 113 40.7
Peaxi162Scf00540g00518 Petunia axillaris HOM05D000103 ORTHO05D000049 8.3e-10 67.4 110 39.1
Hma1.2p1_0146F.1_g065740 Hydrangea macrophylla HOM05D000103 ORTHO05D000049 1.1e-09 67.0 109 40.4
Gohir.D07G107800 Gossypium hirsutum HOM05D000103 ORTHO05D000049 1.4e-09 66.6 115 42.6
Gorai.001G115700 Gossypium raimondii HOM05D000103 ORTHO05D000049 1.4e-09 66.6 115 42.6
Solyc06g076930.2 Solanum lycopersicum HOM05D000103 ORTHO05D000049 1.8e-09 66.2 109 39.4
TWI12G0082 Tripterygium wilfordii HOM05D000103 ORTHO05D000049 1.8e-09 66.2 112 37.5
COL.COLO4_19152 Corchorus olitorius HOM05D000103 ORTHO05D000049 2.4e-09 65.9 116 41.4
FAN21G2057 Fragaria x ananassa HOM05D000103 ORTHO05D000049 2.4e-09 65.9 99 42.4
RcHm_v2.0_Chr5g0069411 Rosa chinensis HOM05D000103 ORTHO05D000049 3.1e-09 65.5 101 43.6
CiPaw.13G078000 Carya illinoinensis HOM05D000103 ORTHO05D000049 5.4e-09 64.7 109 43.1
Manes.02G119800 Manihot esculenta HOM05D000103 ORTHO05D000049 5.4e-09 64.7 118 40.7
SalBow2G2553 Salvia bowleyana HOM05D000103 ORTHO05D000049 7.0e-09 64.3 110 42.7
CSS0026774 Camellia sinensis var. sinensis HOM05D000103 ORTHO05D000049 9.1e-09 63.9 111 39.6
Medtr5g070320 Medicago truncatula HOM05D000103 ORTHO05D000049 2.0e-08 62.8 110 40.9
Sopen06g033330 Solanum pennellii HOM05D000103 ORTHO05D000049 2.7e-08 62.4 108 38.0
CAN.G394.124 Capsicum annuum HOM05D000103 ORTHO05D000049 3.5e-08 62.0 110 37.3
Nitab4.5_0000010g0280 Nicotiana tabacum HOM05D000103 ORTHO05D000049 3.5e-08 62.0 110 36.4
Nitab4.5_0004421g0010 Nicotiana tabacum HOM05D000103 ORTHO05D000049 3.5e-08 62.0 110 36.4
QL01p038189 Quercus lobata HOM05D000103 ORTHO05D000049 5.9e-08 61.2 105 39.0
Gohir.A07G104100 Gossypium hirsutum HOM05D000103 ORTHO05D000049 7.7e-08 60.8 111 42.3
Lsat_1_v5_gn_9_19181 Lactuca sativa HOM05D000103 ORTHO05D000049 7.7e-08 60.8 109 36.7
vmacro02965 Vaccinium macrocarpon HOM05D000103 ORTHO05D012717 7.7e-08 60.8 117 37.6
HanXRQChr08g0229431 Helianthus annuus HOM05D000103 ORTHO05D000049 1.0e-07 60.5 109 37.6
Ah.08g221150 Amaranthus hybridus HOM05D000103 ORTHO05D000049 2.3e-07 59.3 109 39.4
arahy.Tifrunner.gnm1.ann1.WF5046 Arachis hypogaea HOM05D000103 ORTHO05D000049 2.3e-07 59.3 59 59.3
arahy.Tifrunner.gnm1.ann1.XJRE93 Arachis hypogaea HOM05D000103 ORTHO05D000049 2.3e-07 59.3 59 59.3
ATR0618G045 Amborella trichopoda HOM05D000103 ORTHO05D000049 2.9e-07 58.9 111 36.9
VMungo0540G0427 Vigna mungo HOM05D000103 ORTHO05D000049 2.9e-07 58.9 106 37.7
Ca_05596_v3 Cicer arietinum L. HOM05D000103 ORTHO05D000049 3.8e-07 58.5 112 40.2
Sed0008805 Sechium edule HOM05D000103 ORTHO05D000049 3.8e-07 58.5 119 37.0
AUR62001767 Chenopodium quinoa HOM05D000103 ORTHO05D000049 5.0e-07 58.2 107 41.1
Ciclev10027680m.g Citrus clementina HOM05D000103 ORTHO05D000049 5.0e-07 58.2 109 41.3
DCAR_007372 Daucus carota HOM05D000103 ORTHO05D000049 5.0e-07 58.2 110 39.1
Lalb_Chr17g0345071 Lupinus albus HOM05D000103 ORTHO05D000049 6.6e-07 57.8 113 38.9
vmacro02964 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 6.6e-07 57.8 105 40.0
AUR62009550 Chenopodium quinoa HOM05D000103 ORTHO05D000049 8.6e-07 57.4 107 41.1
Phvul.006G067700 Phaseolus vulgaris HOM05D000103 ORTHO05D000049 8.6e-07 57.4 106 37.7
Cfa011692 Carpinus fangiana HOM05D000103 ORTHO05D000049 1.1e-06 57.0 109 40.4
Phvul.008G261600 Phaseolus vulgaris HOM05D000103 ORTHO05D000049 2.5e-06 55.8 109 37.6
ECA247G3606 Erigeron canadensis HOM05D000103 ORTHO05D000049 3.3e-06 55.5 109 36.7
TPR.G5753 Trifolium pratense HOM05D000103 ORTHO05D012717 3.3e-06 55.5 112 39.3
Lalb_Chr15g0082881 Lupinus albus HOM05D000103 ORTHO05D012717 5.5e-06 54.7 107 38.3
Lj6g0006050 Lotus japonicus HOM05D000103 ORTHO05D000049 9.5e-06 53.9 109 35.8
LjContig00155g0003118 Lotus japonicus HOM05D000103 ORTHO05D000049 9.5e-06 53.9 117 39.3
MBI14_g31685_MAGBIO Magnolia biondii HOM05D000103 ORTHO05D000049 9.5e-06 53.9 106 34.0


User provided reference genes

Program Settings