Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p38520 Brassica napus HOM05D007203 ORTHO05D014981 3.9e-39 164.5 90 100.0
A08p11290 Brassica napus HOM05D007203 ORTHO05D014981 5.2e-28 127.5 81 87.7
C06p20840 Brassica napus HOM05D007203 ORTHO05D014981 8.9e-28 126.7 79 91.1
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 1.5e-22 109.4 64 90.6
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 2.5e-22 108.6 64 90.6
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 2.5e-22 108.6 64 90.6
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 3.3e-22 108.2 64 90.6
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 4.3e-22 107.8 64 90.6
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 4.7e-21 104.4 64 87.5
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 1.1e-20 103.2 63 88.9
BolC5t32659H Brassica oleracea HOM05D007203 ORTHO05D014981 1.1e-20 103.2 63 90.5
BcaC03g15868 Brassica carinata HOM05D007203 ORTHO05D008395 2.4e-20 102.1 65 84.6
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 2.4e-20 102.1 64 85.9
C05p39250 Brassica napus HOM05D007203 ORTHO05D039141 3.1e-20 101.7 62 90.3
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 3.1e-20 101.7 63 87.3
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 3.1e-20 101.7 67 83.6
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 3.1e-20 101.7 67 83.6
C03p58910 Brassica napus HOM05D007203 ORTHO05D014981 1.2e-19 99.8 63 87.3
BcaC04g23792 Brassica carinata HOM05D007203 ORTHO05D014981 2.0e-19 99.0 60 90.0
A08p11270 Brassica napus HOM05D007203 ORTHO05D014981 2.6e-19 98.6 63 85.7
BraA08t33122Z Brassica rapa HOM05D007203 ORTHO05D014981 2.6e-19 98.6 63 85.7
A07p08910 Brassica napus HOM05D007203 ORTHO05D014981 3.4e-19 98.2 62 87.1
BolC6t37271H Brassica oleracea HOM05D007203 ORTHO05D014981 3.4e-19 98.2 60 90.0
BraA08t33125Z Brassica rapa HOM05D007203 ORTHO05D014981 3.4e-19 98.2 60 88.3
BraA07t28682Z Brassica rapa HOM05D007203 ORTHO05D108101 4.6e-16 87.8 57 84.2
BcaC04g20469 Brassica carinata HOM05D007203 ORTHO05D014981 7.8e-16 87.0 54 87.0
C09p28920 Brassica napus HOM05D007203 ORTHO05D100065 2.3e-15 85.5 52 88.5
BcaB01g02001 Brassica carinata HOM05D007203 ORTHO05D008395 7.3e-14 80.5 69 69.6
BcaB01g01643 Brassica carinata HOM05D007203 ORTHO05D011558 1.2e-13 79.7 67 70.1
BcaC05g26664 Brassica carinata HOM05D007203 ORTHO05D095942 1.1e-12 76.6 67 68.7
BcaB03g16331 Brassica carinata HOM05D007203 ORTHO05D011558 1.4e-12 76.3 67 68.7
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 9.9e-11 70.1 61 68.9
A01p36020 Brassica napus HOM05D007203 ORTHO05D020137 2.2e-10 68.9 71 63.4
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 2.9e-10 68.6 68 64.7
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 2.9e-10 68.6 68 64.7
BraA04t16843Z Brassica rapa HOM05D007203 ORTHO05D020137 2.9e-10 68.6 69 65.2
BcaB07g32667 Brassica carinata HOM05D003147 ORTHO05D003245 3.8e-10 68.2 73 61.6
A01p28280 Brassica napus HOM05D004128 ORTHO05D017536 8.4e-10 67.0 72 62.5
BraA07t29497Z Brassica rapa HOM05D004128 ORTHO05D017536 8.4e-10 67.0 72 62.5
C04p52660 Brassica napus HOM05D007203 ORTHO05D020137 1.1e-09 66.6 73 61.6
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 1.4e-09 66.2 70 62.9
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 1.4e-09 66.2 70 62.9
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 1.9e-09 65.9 72 62.5
BraA08t33243Z Brassica rapa HOM05D004128 ORTHO05D017536 3.2e-09 65.1 72 61.1
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 4.2e-09 64.7 70 61.4
BcaB02g11369 Brassica carinata HOM05D007203 ORTHO05D094245 9.3e-09 63.5 63 61.9
BcaC08g43729 Brassica carinata HOM05D007203 ORTHO05D092975 9.3e-09 63.5 68 61.8
A02p26600 Brassica napus HOM05D007203 ORTHO05D020127 1.6e-08 62.8 77 55.8
C01p47030 Brassica napus HOM05D007203 ORTHO05D020137 2.1e-08 62.4 73 58.9
BolC1t04671H Brassica oleracea HOM05D007203 ORTHO05D020137 2.1e-08 62.4 73 58.9
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 3.5e-08 61.6 70 61.4
C04p49980 Brassica napus HOM05D007203 ORTHO05D027555 4.6e-08 61.2 70 60.0
BcaB03g12495 Brassica carinata HOM05D007203 ORTHO05D020127 6.0e-08 60.8 63 61.9
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 1.0e-07 60.1 63 63.5
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 1.3e-07 59.7 68 58.8
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-07 59.7 71 57.7
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-07 59.7 68 58.8
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 2.3e-07 58.9 68 60.3
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 2.3e-07 58.9 71 57.7
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 3.9e-07 58.2 71 56.3
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 6.6e-07 57.4 67 59.7
BcaC09g48677 Brassica carinata HOM05D007203 ORTHO05D020137 6.6e-07 57.4 69 58.0
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 8.7e-07 57.0 71 56.3
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 2.5e-06 55.5 63 61.9
BolC3t17978H Brassica oleracea HOM05D007203 ORTHO05D020127 2.5e-06 55.5 63 61.9
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 3.3e-06 55.1 69 55.1
BcaB04g18412 Brassica carinata HOM05D007203 ORTHO05D011558 4.3e-06 54.7 50 66.0
C08p21900 Brassica napus HOM05D007203 ORTHO05D020127 5.6e-06 54.3 63 60.3
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 5.6e-06 54.3 70 55.7
C06p32870 Brassica napus HOM05D007203 ORTHO05D102649 7.3e-06 53.9 64 57.8


User provided reference genes

Program Settings