Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p38430 Brassica napus HOM05D002391 ORTHO05D017667 2.9e-143 511.9 263 100.0
BcaC01g06822 Brassica carinata HOM05D002391 ORTHO05D004870 1.3e-66 257.3 157 84.7
A03p31630 Brassica napus HOM05D002391 ORTHO05D004870 1.3e-66 257.3 157 84.7
BraA03t12339Z Brassica rapa HOM05D002391 ORTHO05D004870 1.3e-66 257.3 157 84.7
C03p38630 Brassica napus HOM05D002391 ORTHO05D004870 3.7e-66 255.8 157 84.1
BolC3t16136H Brassica oleracea HOM05D002391 ORTHO05D004870 3.7e-66 255.8 157 84.1
Aa31LG5G1170 Aethionema arabicum HOM05D002391 ORTHO05D004870 2.4e-65 253.1 157 82.8
Sp6g01350 Schrenkiella parvula HOM05D002391 ORTHO05D004870 7.0e-65 251.5 157 82.8
AL6G52005 Arabidopsis lyrata HOM05D002391 ORTHO05D004870 4.5e-64 248.8 157 82.2
CARHR250280 Cardamine hirsuta HOM05D002391 ORTHO05D004870 4.5e-64 248.8 157 81.5
Thhalv10028369m.g Eutrema salsugineum HOM05D002391 ORTHO05D004870 5.9e-64 248.4 157 81.5
AT4G01395 Arabidopsis thaliana HOM05D002391 ORTHO05D004870 1.5e-62 243.8 157 80.9
BolC2t09861H Brassica oleracea HOM05D002391 ORTHO05D017667 3.3e-62 242.7 127 98.4
Carub.0006s3580 Capsella rubella HOM05D002391 ORTHO05D004870 3.3e-62 242.7 157 79.6
A03p50140 Brassica napus HOM05D002391 ORTHO05D004870 4.3e-62 242.3 147 85.0
THA.LOC104815894 Tarenaya hassleriana HOM05D002391 ORTHO05D004870 9.5e-62 241.1 145 86.2
BcaC03g16083 Brassica carinata HOM05D002391 ORTHO05D017667 1.5e-54 217.2 113 100.0
Manes.01G239800 Manihot esculenta HOM05D002391 ORTHO05D004870 1.9e-54 216.9 159 70.4
ClCG06G002280 Citrullus lanatus HOM05D002391 ORTHO05D004870 9.5e-54 214.5 166 68.7
CANSAT56G4076 Cannabis sativa HOM05D002391 ORTHO05D004870 1.2e-53 214.2 150 71.3
CANSAT56G4423 Cannabis sativa HOM05D002391 ORTHO05D004870 1.2e-53 214.2 150 71.3
Sed0000252 Sechium edule HOM05D002391 ORTHO05D004870 1.6e-53 213.8 166 68.7
Gohir.A02G090600 Gossypium hirsutum HOM05D002391 ORTHO05D004870 3.6e-53 212.6 165 66.1
COL.COLO4_31148 Corchorus olitorius HOM05D002391 ORTHO05D004870 4.7e-53 212.2 163 66.9
CsaV3_6G008330 Cucumis sativus L. HOM05D002391 ORTHO05D004870 6.2e-53 211.8 166 68.7
TWI59G0940 Tripterygium wilfordii HOM05D002391 ORTHO05D004870 6.2e-53 211.8 159 68.6
Aqoxy5G01515 Aquilegia oxysepala HOM05D002391 ORTHO05D004870 8.0e-53 211.5 146 75.3
Atru.chr5.768 Acer truncatum HOM05D002391 ORTHO05D004870 1.4e-52 210.7 147 70.7
Gorai.005G122300 Gossypium raimondii HOM05D002391 ORTHO05D004870 1.4e-52 210.7 165 65.5
TWI14G1409 Tripterygium wilfordii HOM05D002391 ORTHO05D004870 1.4e-52 210.7 159 69.8
MELO3C022305.2 Cucumis melo HOM05D002391 ORTHO05D004870 1.8e-52 210.3 166 68.1
Duzib235G0384 Durio zibethinus HOM05D002391 ORTHO05D004870 2.3e-52 209.9 165 64.8
Gohir.D02G107800 Gossypium hirsutum HOM05D002391 ORTHO05D004870 4.0e-52 209.1 165 65.5
vmacro13188 Vaccinium macrocarpon HOM05D002391 ORTHO05D004870 4.0e-52 209.1 148 72.3
Ciclev10018998m.g Citrus clementina HOM05D002391 ORTHO05D004870 5.2e-52 208.8 162 65.4
Nn2g14439 Nelumbo nucifera HOM05D002391 ORTHO05D004870 5.2e-52 208.8 148 71.6
Potri.002G179600 Populus trichocarpa HOM05D002391 ORTHO05D004870 6.8e-52 208.4 163 68.1
Lj9A607T84 Lonicera japonica HOM05D002391 ORTHO05D004870 8.9e-52 208.0 149 71.8
TAR629G2316 Trochodendron aralioides HOM05D002391 ORTHO05D004870 1.2e-51 207.6 148 73.0
Thecc.06G056400 Theobroma cacao HOM05D002391 ORTHO05D004870 1.5e-51 207.2 162 65.4
Lsat_1_v5_gn_3_17681 Lactuca sativa HOM05D002391 ORTHO05D004870 4.4e-51 205.7 145 69.7
Sabra02G0134300 Salix brachista HOM05D002391 ORTHO05D004870 4.4e-51 205.7 163 66.9
TAR636G3264 Trochodendron aralioides HOM05D002391 ORTHO05D004870 5.8e-51 205.3 148 71.6
Dinv31611 Davidia involucrata HOM05D002391 ORTHO05D004870 7.5e-51 204.9 148 70.3
Hma1.2p1_0074F.1_g038740 Hydrangea macrophylla HOM05D002391 ORTHO05D004870 7.5e-51 204.9 153 68.6
arahy.Tifrunner.gnm1.ann1.SI3K9E Arachis hypogaea HOM05D002391 ORTHO05D004870 9.8e-51 204.5 155 69.0
Dinv32645 Davidia involucrata HOM05D002391 ORTHO05D004870 1.3e-50 204.1 148 69.6
Actinidia08007 Actinidia chinensis HOM05D002391 ORTHO05D004870 2.2e-50 203.4 150 70.0
arahy.Tifrunner.gnm1.ann1.E8X9SV Arachis hypogaea HOM05D002391 ORTHO05D004870 4.9e-50 202.2 155 68.4
CDE11G0036 Ceratophyllum demersum HOM05D002391 ORTHO05D004870 8.3e-50 201.4 157 64.3
MBI12_g09288_MAGBIO Magnolia biondii HOM05D002391 ORTHO05D004870 8.3e-50 201.4 165 63.6
Lsat_1_v5_gn_4_41841 Lactuca sativa HOM05D002391 ORTHO05D004870 1.1e-49 201.1 145 68.3
Haze_15735 Corylus avellana HOM05D002391 ORTHO05D004870 1.4e-49 200.7 165 62.4
MD07G1159800 Malus domestica HOM05D002391 ORTHO05D004870 1.9e-49 200.3 147 66.7
Cfa003734 Carpinus fangiana HOM05D002391 ORTHO05D004870 2.4e-49 199.9 165 61.8
Lj5g0026855 Lotus japonicus HOM05D002391 ORTHO05D004870 2.4e-49 199.9 147 68.0
MD07G1159900 Malus domestica HOM05D002391 ORTHO05D004870 2.4e-49 199.9 147 66.0
RcHm_v2.0_Chr1g0334501 Rosa chinensis HOM05D002391 ORTHO05D004870 3.2e-49 199.5 160 63.8
Gohir.D06G121400 Gossypium hirsutum HOM05D002391 ORTHO05D004870 5.4e-49 198.7 165 61.8
Gorai.010G141700 Gossypium raimondii HOM05D002391 ORTHO05D004870 5.4e-49 198.7 165 61.8
FvH4_7g17670 Fragaria vesca HOM05D002391 ORTHO05D004870 7.0e-49 198.4 160 63.1
FAN03G0415 Fragaria x ananassa HOM05D002391 ORTHO05D004870 7.0e-49 198.4 160 63.1
FAN06G0341 Fragaria x ananassa HOM05D002391 ORTHO05D004870 7.0e-49 198.4 160 63.1
FAN06G0379 Fragaria x ananassa HOM05D002391 ORTHO05D004870 7.0e-49 198.4 160 63.1
QL08p047248 Quercus lobata HOM05D002391 ORTHO05D004870 7.0e-49 198.4 163 62.0
Phvul.009G254600 Phaseolus vulgaris HOM05D002391 ORTHO05D004870 9.2e-49 198.0 147 70.7
Psat0s3525g0040 Pisum sativum HOM05D002391 ORTHO05D004870 1.6e-48 197.2 153 68.6
Prupe.2G197800 Prunus persica HOM05D002391 ORTHO05D004870 1.6e-48 197.2 147 65.3
Lalb_Chr18g0044711 Lupinus albus HOM05D002391 ORTHO05D004870 2.0e-48 196.8 149 67.8
FAN01G3049 Fragaria x ananassa HOM05D002391 ORTHO05D004870 3.5e-48 196.1 148 66.2
Phvul.009G257900 Phaseolus vulgaris HOM05D002391 ORTHO05D004870 3.5e-48 196.1 147 70.1
CiPaw.01G082500 Carya illinoinensis HOM05D002391 ORTHO05D004870 4.6e-48 195.7 164 60.4
FAN10G1672 Fragaria x ananassa HOM05D002391 ORTHO05D004870 6.0e-48 195.3 160 62.5
Glyma.03G261100 Glycine max HOM05D002391 ORTHO05D004870 6.0e-48 195.3 147 70.1
Gohir.A06G116700 Gossypium hirsutum HOM05D002391 ORTHO05D004870 7.8e-48 194.9 165 61.8
FAN10G4291 Fragaria x ananassa HOM05D002391 ORTHO05D004870 1.0e-47 194.5 160 62.5
Prupe.2G092100 Prunus persica HOM05D002391 ORTHO05D004870 1.0e-47 194.5 148 65.5
VMungo1309G1994 Vigna mungo HOM05D002391 ORTHO05D004870 1.0e-47 194.5 147 69.4
HanXRQChr16g0520851 Helianthus annuus HOM05D002391 ORTHO05D004870 1.3e-47 194.1 145 64.8
Nitab4.5_0003729g0040 Nicotiana tabacum HOM05D002391 ORTHO05D004870 2.3e-47 193.4 150 65.3
VMungo1309G0406 Vigna mungo HOM05D002391 ORTHO05D004870 3.9e-47 192.6 146 69.2
Ca_09546_v3 Cicer arietinum L. HOM05D002391 ORTHO05D004870 5.0e-47 192.2 151 66.9
Glyma.19G260100 Glycine max HOM05D002391 ORTHO05D004870 5.0e-47 192.2 147 68.7
TPR.G4730 Trifolium pratense HOM05D002391 ORTHO05D004870 6.6e-47 191.8 151 66.9
Medtr7g118220 Medicago truncatula HOM05D002391 ORTHO05D004870 3.3e-46 189.5 151 65.6
Nitab4.5_0003682g0020 Nicotiana tabacum HOM05D002391 ORTHO05D004870 9.5e-46 188.0 150 63.3
CAN.G1209.27 Capsicum annuum HOM05D002391 ORTHO05D004870 1.2e-45 187.6 150 64.7
CAN.G585.49 Capsicum annuum HOM05D002391 ORTHO05D004870 2.1e-45 186.8 150 64.7
Peaxi162Scf00028g00124 Petunia axillaris HOM05D002391 ORTHO05D004870 2.8e-45 186.4 149 63.1
Migut.B01922 Erythranthe guttata HOM05D002391 ORTHO05D004870 4.7e-45 185.7 148 65.5
unitig_21.g20038 Utricularia gibba HOM05D002391 ORTHO05D004870 4.7e-45 185.7 148 63.5
PGSC0003DMG401031089 Solanum tuberosum HOM05D002391 ORTHO05D004870 6.2e-45 185.3 150 64.0
Lalb_Chr15g0076531 Lupinus albus HOM05D002391 ORTHO05D004870 8.1e-45 184.9 149 65.1
Sopen07g029360 Solanum pennellii HOM05D002391 ORTHO05D004870 8.1e-45 184.9 150 64.0
Solyc07g056010.3 Solanum lycopersicum HOM05D002391 ORTHO05D004870 1.1e-44 184.5 150 64.0
MSTRG.17383 Avicennia marina HOM05D002391 ORTHO05D004870 3.1e-44 183.0 148 64.2
DCAR_022118 Daucus carota HOM05D002391 ORTHO05D004870 5.2e-44 182.2 151 64.2
DCAR_032252 Daucus carota HOM05D002391 ORTHO05D004870 5.2e-44 182.2 151 64.2
unitig_899.g15596 Utricularia gibba HOM05D002391 ORTHO05D004870 1.2e-43 181.0 170 57.1
Eucgr.B02196 Eucalyptus grandis HOM05D002391 ORTHO05D004870 4.4e-43 179.1 148 64.9
PSO017G7365 Papaver somniferum HOM05D002391 ORTHO05D004870 5.8e-43 178.7 147 63.3
PSO339G3919 Papaver somniferum HOM05D002391 ORTHO05D004870 7.5e-43 178.3 147 63.3
PSO170G3053 Papaver somniferum HOM05D002391 ORTHO05D004870 1.7e-42 177.2 147 62.6
HPP92_001559 Vanilla planifolia HOM05D002391 ORTHO05D004870 4.9e-42 175.6 153 56.9
ECA234G3070 Erigeron canadensis HOM05D002391 ORTHO05D004870 1.1e-41 174.5 160 53.8
SGA_v2.0_scaffold12G06269 Striga asiatica HOM05D002391 ORTHO05D004870 1.1e-41 174.5 148 60.1
AUR62040015 Chenopodium quinoa HOM05D002391 ORTHO05D004870 1.6e-40 170.6 146 61.0
AUR62042494 Chenopodium quinoa HOM05D002391 ORTHO05D004870 1.6e-40 170.6 147 59.9
Sc20g0005510 Simmondsia chinensis HOM05D002391 ORTHO05D004870 6.0e-40 168.7 159 55.3
Manes.05G016350 Manihot esculenta HOM05D002391 ORTHO05D004870 1.0e-39 167.9 157 58.6
ATR0697G195 Amborella trichopoda HOM05D002391 ORTHO05D004870 1.3e-39 167.5 174 52.9
A02p19250 Brassica napus HOM05D026879 ORTHO05D017667 1.3e-39 167.5 151 61.6
BolC2t09211H Brassica oleracea HOM05D026879 ORTHO05D017667 1.3e-39 167.5 151 61.6
PGR031G3302 Punica granatum HOM05D002391 ORTHO05D004870 1.3e-39 167.5 160 57.5
CDE02G1610 Ceratophyllum demersum HOM05D002391 ORTHO05D004870 2.3e-39 166.8 137 62.0
Ah.08g211620 Amaranthus hybridus HOM05D002391 ORTHO05D004870 5.1e-39 165.6 153 56.9
SalBow3G2598 Salvia bowleyana HOM05D002391 ORTHO05D004870 1.1e-38 164.5 148 57.4
SalBow3G4592 Salvia bowleyana HOM05D002391 ORTHO05D004870 1.1e-38 164.5 148 57.4
ECA234G2472 Erigeron canadensis HOM05D002391 ORTHO05D004870 1.5e-38 164.1 160 50.0
SEGI_23282 Sequoiadendron giganteum HOM05D002391 ORTHO05D004870 1.5e-38 164.1 161 52.2
Hund24710 Selenicereus undatus HOM05D002391 ORTHO05D004870 1.9e-38 163.7 156 55.1
SEGI_26155 Sequoiadendron giganteum HOM05D002391 ORTHO05D004870 9.5e-38 161.4 161 51.6
Mapoly0151s0016 Marchantia polymorpha HOM05D002391 ORTHO05D004870 5.8e-35 152.1 167 49.7
EL10Ac7g16621 Beta vulgaris HOM05D002391 ORTHO05D004870 7.6e-35 151.8 163 50.9
Carub.0003s2971 Capsella rubella HOM05D002391 ORTHO05D004870 4.9e-34 149.1 129 62.0
Pp3c17_20140 Physcomitrium patens HOM05D002391 ORTHO05D004870 7.1e-33 145.2 174 44.8
FvH4_5g29942 Fragaria vesca HOM05D002391 ORTHO05D017667 1.6e-32 144.1 172 49.4
BcaB05g23972 Brassica carinata HOM05D002391 ORTHO05D004870 1.2e-29 134.4 80 81.2
AagrBONN_evm.TU.Sc2ySwM_344.5215 Anthoceros agrestis HOM05D002391 ORTHO05D004870 1.6e-29 134.0 187 39.6
Oeu007915.2 Olea europaea HOM05D002391 ORTHO05D004870 2.8e-29 133.3 98 70.4
SMO364G0412 Selaginella moellendorffii HOM05D002391 ORTHO05D004870 6.2e-29 132.1 148 48.0
GSVIVG01027440001 Vitis vinifera HOM05D002391 ORTHO05D004870 1.5e-27 127.5 94 68.1
Cc06_g20470 Coffea canephora HOM05D002391 ORTHO05D004870 2.3e-23 113.6 97 57.7
Zm00001eb005370 Zea mays HOM05D002391 ORTHO05D004870 1.4e-20 104.4 124 44.4
Zm00001eb402340 Zea mays HOM05D002391 ORTHO05D004870 9.0e-20 101.7 124 42.7
FvH4_4g00571 Fragaria vesca HOM05D002391 ORTHO05D004870 3.4e-19 99.8 85 61.2
Cre06.g287250 Chlamydomonas reinhardtii HOM05D002391 ORTHO05D004870 5.8e-19 99.0 183 32.2
Os02g0456000 Oryza sativa ssp. japonica HOM05D002391 ORTHO05D004870 7.6e-19 98.6 134 40.3
FAN18G2005 Fragaria x ananassa HOM05D002391 ORTHO05D017667 9.9e-19 98.2 71 66.2
CAN.G732.5 Capsicum annuum HOM05D002391 ORTHO05D004870 3.8e-18 96.3 85 54.1
MBI12_g48127_MAGBIO Magnolia biondii HOM05D002391 ORTHO05D004870 4.9e-18 95.9 168 41.1
PRCOL_00002903 Prasinoderma coloniale HOM05D002391 ORTHO05D004870 7.1e-17 92.0 149 34.9
Rhsim07G0007000 Rhododendron simsii HOM05D002391 ORTHO05D004870 7.9e-16 88.6 73 57.5
C09p52400 Brassica napus HOM05D000073 ORTHO05D017582 7.4e-14 82.0 51 78.4
BolC1t04175H Brassica oleracea HOM05D000073 ORTHO05D017582 7.4e-14 82.0 51 78.4
BolC9t58109H Brassica oleracea HOM05D000073 ORTHO05D017582 7.4e-14 82.0 51 78.4
FAN19G0487 Fragaria x ananassa HOM05D002391 ORTHO05D017667 7.4e-14 82.0 54 70.4
C09p10850 Brassica napus HOM05D000073 ORTHO05D017582 2.1e-13 80.5 51 76.5
BolC2t09862H Brassica oleracea HOM05D026879 ORTHO05D106375 9.0e-12 75.1 74 55.4
CBR_g6290 Chara braunii HOM05D002391 ORTHO05D004870 4.2e-09 66.2 65 46.2
BcaC09g49148 Brassica carinata HOM05D000073 ORTHO05D017582 2.3e-07 60.5 37 78.4
BraA03t14107Z Brassica rapa HOM05D002391 ORTHO05D004870 1.5e-06 57.8 34 79.4
BraA05t21723Z Brassica rapa HOM05D002391 ORTHO05D004870 1.5e-06 57.8 34 79.4
A05p28430 Brassica napus HOM05D002391 ORTHO05D004870 3.3e-06 56.6 34 79.4
TPR.G34125 Trifolium pratense HOM05D002391 ORTHO05D004870 7.4e-06 55.5 45 62.2


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