Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p38280 Brassica napus HOM05D005178 ORTHO05D006123 2.3e-143 512.3 277 100.0
BolC2t09843H Brassica oleracea HOM05D005178 ORTHO05D006123 6.3e-141 504.2 277 98.6
BraA02t07418Z Brassica rapa HOM05D005178 ORTHO05D006123 5.9e-139 497.7 276 96.7
BcaC03g16062 Brassica carinata HOM05D005178 ORTHO05D006123 1.8e-132 476.1 264 98.1
Thhalv10028895m.g Eutrema salsugineum HOM05D005178 ORTHO05D006123 3.2e-108 395.6 254 85.0
Sp6g01000 Schrenkiella parvula HOM05D005178 ORTHO05D006123 3.2e-108 395.6 254 87.0
AL6G52250 Arabidopsis lyrata HOM05D005178 ORTHO05D006123 7.3e-105 384.4 254 83.1
A03p31890 Brassica napus HOM05D005178 ORTHO05D006123 2.3e-103 379.4 273 78.0
CARHR249180 Cardamine hirsuta HOM05D005178 ORTHO05D006123 2.0e-102 376.3 254 81.5
BolC3t16162H Brassica oleracea HOM05D005178 ORTHO05D006123 3.7e-101 372.1 254 80.3
BcaB01g02336 Brassica carinata HOM05D005178 ORTHO05D006123 2.4e-100 369.4 253 79.1
C03p38880 Brassica napus HOM05D005178 ORTHO05D006123 5.4e-100 368.2 255 77.3
AT4G01110 Arabidopsis thaliana HOM05D005178 ORTHO05D006123 6.6e-98 361.3 255 78.0
BcaC01g06846 Brassica carinata HOM05D005178 ORTHO05D006123 1.1e-97 360.5 253 79.1
A02p24280 Brassica napus HOM05D005178 ORTHO05D006123 6.2e-96 354.8 264 74.2
Carub.0006s3617 Capsella rubella HOM05D005178 ORTHO05D006123 5.8e-94 348.2 258 76.7
BraA03t12361Z Brassica rapa HOM05D005178 ORTHO05D006123 2.6e-86 322.8 255 73.3
A10p00520 Brassica napus HOM05D005178 ORTHO05D006123 1.9e-84 316.6 266 66.9
Aa31LG5G850 Aethionema arabicum HOM05D005178 ORTHO05D006123 7.1e-84 314.7 277 61.4
BolC5t28844H Brassica oleracea HOM05D005178 ORTHO05D006123 9.3e-84 314.3 268 65.7
BraA10t42331Z Brassica rapa HOM05D005178 ORTHO05D006123 9.3e-84 314.3 266 66.9
BcaB03g13583 Brassica carinata HOM05D005178 ORTHO05D006123 1.0e-82 310.8 264 66.3
C05p00550 Brassica napus HOM05D005178 ORTHO05D006123 1.3e-82 310.5 264 66.3
Carub.0001s0080 Capsella rubella HOM05D005178 ORTHO05D006123 1.1e-79 300.8 255 67.8
CARHR000970 Cardamine hirsuta HOM05D005178 ORTHO05D006123 4.0e-79 298.9 254 60.6
Thhalv10009686m.g Eutrema salsugineum HOM05D005178 ORTHO05D006123 7.6e-78 294.7 256 66.0
AL1G10980 Arabidopsis lyrata HOM05D005178 ORTHO05D006123 1.3e-77 293.9 254 62.6
Sp1g00860 Schrenkiella parvula HOM05D005178 ORTHO05D006123 1.9e-76 290.0 269 63.2
AT1G01453 Arabidopsis thaliana HOM05D005178 ORTHO05D006123 1.6e-75 287.0 254 65.4
THA.LOC104825868 Tarenaya hassleriana HOM05D005178 ORTHO05D006123 3.0e-74 282.7 270 60.7
Aa31LG1G10830 Aethionema arabicum HOM05D005178 ORTHO05D006123 1.6e-64 250.4 251 56.6
C03p30470 Brassica napus HOM05D005178 ORTHO05D006123 9.7e-41 171.4 248 46.0
BolC3t15395H Brassica oleracea HOM05D005178 ORTHO05D006123 9.7e-41 171.4 248 46.0
AL4G45600 Arabidopsis lyrata HOM05D005178 ORTHO05D006123 3.1e-39 166.4 254 41.7
A05p01500 Brassica napus HOM05D005178 ORTHO05D006123 3.1e-39 166.4 259 45.9
BraA05t19146Z Brassica rapa HOM05D005178 ORTHO05D006123 3.1e-39 166.4 259 45.9
BcaC01g05079 Brassica carinata HOM05D005178 ORTHO05D006123 4.1e-39 166.0 251 47.0
BcaC02g12521 Brassica carinata HOM05D005178 ORTHO05D006123 7.0e-39 165.2 259 45.9
C04p01700 Brassica napus HOM05D005178 ORTHO05D006123 7.0e-39 165.2 259 45.9
BolC4t21822H Brassica oleracea HOM05D005178 ORTHO05D006123 7.0e-39 165.2 259 45.9
Gohir.D12G113800 Gossypium hirsutum HOM05D005178 ORTHO05D006123 3.5e-38 162.9 250 38.8
Gohir.D11G099200 Gossypium hirsutum HOM05D005178 ORTHO05D006123 7.7e-38 161.8 250 45.2
Gorai.008G123300 Gossypium raimondii HOM05D005178 ORTHO05D006123 1.0e-37 161.4 250 39.2
Gohir.A11G094200 Gossypium hirsutum HOM05D005178 ORTHO05D006123 2.9e-37 159.8 250 45.2
Thecc.01G348100 Theobroma cacao HOM05D005178 ORTHO05D006123 6.5e-37 158.7 250 47.2
Gorai.007G105400 Gossypium raimondii HOM05D005178 ORTHO05D006123 8.5e-37 158.3 250 44.8
BcaB01g03231 Brassica carinata HOM05D005178 ORTHO05D006123 2.5e-36 156.8 248 44.8
BcaC01g05085 Brassica carinata HOM05D005178 ORTHO05D006123 2.5e-36 156.8 248 44.8
AT2G46300 Arabidopsis thaliana HOM05D005178 ORTHO05D006123 3.2e-36 156.4 254 40.2
THA.LOC104802056 Tarenaya hassleriana HOM05D005178 ORTHO05D006123 3.2e-36 156.4 249 46.6
A03p25540 Brassica napus HOM05D005178 ORTHO05D006123 2.1e-35 153.7 248 44.4
BraA03t11771Z Brassica rapa HOM05D005178 ORTHO05D006123 2.1e-35 153.7 248 44.4
Duzib138G0021 Durio zibethinus HOM05D005178 ORTHO05D006123 2.3e-34 150.2 250 44.8
Aa31LG1G27670 Aethionema arabicum HOM05D005178 ORTHO05D006123 4.0e-34 149.4 246 37.0
Thhalv10001596m.g Eutrema salsugineum HOM05D005178 ORTHO05D006123 4.0e-34 149.4 255 39.2
Duzib133G0451 Durio zibethinus HOM05D005178 ORTHO05D006123 5.2e-34 149.1 250 44.0
Carub.0004s2900 Capsella rubella HOM05D005178 ORTHO05D006123 4.8e-32 142.5 254 36.6
Sp4g28340 Schrenkiella parvula HOM05D005178 ORTHO05D006123 1.4e-31 141.0 173 45.7
Potri.014G094400 Populus trichocarpa HOM05D005178 ORTHO05D006123 1.8e-31 140.6 256 39.5
Potri.002G167300 Populus trichocarpa HOM05D005178 ORTHO05D006123 3.1e-31 139.8 251 39.4
CARHR141580 Cardamine hirsuta HOM05D005178 ORTHO05D006123 1.6e-30 137.5 251 36.7
Sabra02G0144400 Salix brachista HOM05D005178 ORTHO05D006123 1.6e-30 137.5 253 38.7
Nn7g37376 Nelumbo nucifera HOM05D005178 ORTHO05D006123 2.0e-30 137.1 250 37.2
Manes.05G026400 Manihot esculenta HOM05D005178 ORTHO05D006123 1.0e-29 134.8 260 34.2
RcHm_v2.0_Chr1g0358651 Rosa chinensis HOM05D005178 ORTHO05D006123 1.0e-29 134.8 253 41.9
Ciclev10021837m.g Citrus clementina HOM05D005178 ORTHO05D006123 1.3e-29 134.4 263 43.0
Gohir.D08G147400 Gossypium hirsutum HOM05D005178 ORTHO05D006123 1.1e-28 131.3 246 33.7
CANSAT56G4005 Cannabis sativa HOM05D005178 ORTHO05D006123 1.9e-28 130.6 249 41.4
Gohir.A08G126100 Gossypium hirsutum HOM05D005178 ORTHO05D006123 3.2e-28 129.8 246 36.6
QL04p059571 Quercus lobata HOM05D005178 ORTHO05D006123 4.2e-28 129.4 260 43.8
CsaV3_3G008390 Cucumis sativus L. HOM05D000050 ORTHO05D000380 5.5e-28 129.0 254 38.6
Gorai.004G153000 Gossypium raimondii HOM05D005178 ORTHO05D006123 5.5e-28 129.0 246 33.3
Sc01g0002990 Simmondsia chinensis HOM05D005178 ORTHO05D006123 2.7e-27 126.7 250 40.0
THA.LOC104817334 Tarenaya hassleriana HOM05D005178 ORTHO05D006123 6.1e-27 125.6 249 38.2
FAN10G2759 Fragaria x ananassa HOM05D005178 ORTHO05D006123 8.0e-27 125.2 253 38.3
PGR042G2135 Punica granatum HOM05D005178 ORTHO05D006123 8.0e-27 125.2 257 39.3
MELO3C006056.2 Cucumis melo HOM05D005178 ORTHO05D006123 1.4e-26 124.4 253 40.3
Haze_15614 Corylus avellana HOM05D005178 ORTHO05D006123 1.8e-26 124.0 249 43.0
FAN03G0560 Fragaria x ananassa HOM05D005178 ORTHO05D006123 1.8e-26 124.0 253 38.7
FvH4_7g15840 Fragaria vesca HOM05D005178 ORTHO05D006123 2.3e-26 123.6 253 37.5
FAN06G0749 Fragaria x ananassa HOM05D005178 ORTHO05D006123 3.0e-26 123.2 253 37.5
FAN06G4203 Fragaria x ananassa HOM05D005178 ORTHO05D006123 7.5e-25 118.6 258 36.4
Nn1g01788 Nelumbo nucifera HOM05D005178 ORTHO05D006123 9.8e-25 118.2 249 32.9
FAN10G1950 Fragaria x ananassa HOM05D005178 ORTHO05D006123 1.3e-24 117.9 252 37.7
MD07G1144100 Malus domestica HOM05D005178 ORTHO05D006123 4.8e-24 115.9 252 37.3
Atru.chr5.616 Acer truncatum HOM05D005178 ORTHO05D006123 2.4e-23 113.6 250 39.2
Sed0008780 Sechium edule HOM05D005178 ORTHO05D006123 2.4e-23 113.6 251 37.8
CiPaw.01G071600 Carya illinoinensis HOM05D005178 ORTHO05D006123 3.1e-23 113.2 255 37.6
TWI14G0215 Tripterygium wilfordii HOM05D005178 ORTHO05D006123 7.0e-23 112.1 143 47.6
Dinv32550 Davidia involucrata HOM05D005178 ORTHO05D006123 1.6e-22 110.9 251 38.6
VMungo0540G0638 Vigna mungo HOM05D005178 ORTHO05D006123 5.9e-22 109.0 215 40.5
ClCG08G003840 Citrullus lanatus HOM05D005178 ORTHO05D006123 1.0e-21 108.2 256 38.3
Prupe.2G183000 Prunus persica HOM05D005178 ORTHO05D006123 5.0e-21 105.9 175 37.7
Hma1.2p1_0384F.1_g141000 Hydrangea macrophylla HOM05D005178 ORTHO05D006123 3.2e-20 103.2 247 36.8
MD01G1075000 Malus domestica HOM05D005178 ORTHO05D006123 3.2e-20 103.2 253 38.3
Hma1.2p1_2972F.1_g331100 Hydrangea macrophylla HOM05D005178 ORTHO05D006123 4.2e-20 102.8 247 33.2
Sabra14G0069000 Salix brachista HOM05D005178 ORTHO05D006123 4.2e-20 102.8 145 39.3
Sed0006216 Sechium edule HOM05D005178 ORTHO05D006123 4.2e-20 102.8 242 31.0
SalBow5G4166 Salvia bowleyana HOM05D005178 ORTHO05D006123 9.5e-20 101.7 173 38.2
Dinv43890 Davidia involucrata HOM05D005178 ORTHO05D006123 2.1e-19 100.5 250 38.4
Gohir.A12G110633 Gossypium hirsutum HOM05D005178 ORTHO05D006123 1.0e-18 98.2 151 38.4
Sed0019896 Sechium edule HOM05D005178 ORTHO05D006123 1.0e-18 98.2 254 39.8
Phvul.006G110000 Phaseolus vulgaris HOM05D005178 ORTHO05D006123 1.8e-18 97.4 255 34.5
Sopen10g005540 Solanum pennellii HOM05D005178 ORTHO05D006123 1.8e-18 97.4 249 33.7
SHI13195 Sapria himalayana HOM05D005178 ORTHO05D006123 2.3e-18 97.1 172 34.9
Rhsim07G0007300 Rhododendron simsii HOM05D005178 ORTHO05D006123 8.8e-18 95.1 250 37.6
Ca_09491_v3 Cicer arietinum L. HOM05D005178 ORTHO05D006123 1.2e-17 94.7 247 36.0
Solyc10g011750.3 Solanum lycopersicum HOM05D005178 ORTHO05D006123 1.5e-17 94.4 248 33.5
HPP92_005223 Vanilla planifolia HOM05D005178 ORTHO05D006123 9.8e-17 91.7 254 29.9
CSS0038689 Camellia sinensis var. sinensis HOM05D005178 ORTHO05D006123 1.3e-16 91.3 252 37.7
PGSC0003DMG400019400 Solanum tuberosum HOM05D005178 ORTHO05D006123 2.8e-16 90.1 249 33.3
Aqoxy7G00174 Aquilegia oxysepala HOM05D005178 ORTHO05D006123 4.9e-16 89.4 253 32.0
CAN.G1651.2 Capsicum annuum HOM05D005178 ORTHO05D006123 4.9e-16 89.4 250 32.4
SGA_v2.0_scaffold11G05717 Striga asiatica HOM05D005178 ORTHO05D006123 4.9e-16 89.4 248 35.1
CiPaw.02G038200 Carya illinoinensis HOM05D005178 ORTHO05D006123 1.1e-15 88.2 248 33.9
Glyma.03G255300 Glycine max HOM05D005178 ORTHO05D006123 1.4e-15 87.8 177 32.8
Nitab4.5_0002262g0140 Nicotiana tabacum HOM05D005178 ORTHO05D006123 1.4e-15 87.8 254 35.0
Medtr7g116930 Medicago truncatula HOM05D005178 ORTHO05D006123 9.2e-15 85.1 174 32.2
MELO3C029922.2 Cucumis melo HOM05D005178 ORTHO05D006123 2.0e-14 84.0 253 33.6
CsaV3_6G003970 Cucumis sativus L. HOM05D005178 ORTHO05D006123 2.0e-14 84.0 254 34.3
MBI06_g02230_MAGBIO Magnolia biondii HOM05D005178 ORTHO05D006123 2.7e-14 83.6 249 35.3
PSO135G0875 Papaver somniferum HOM05D005178 ORTHO05D006123 2.7e-14 83.6 247 31.6
Peaxi162Scf00403g00074 Petunia axillaris HOM05D005178 ORTHO05D006123 2.7e-14 83.6 255 34.1
Lj7A504T56 Lonicera japonica HOM05D005178 ORTHO05D006123 3.5e-14 83.2 247 32.4
PSO384G3117 Papaver somniferum HOM05D005178 ORTHO05D006123 7.7e-14 82.0 250 31.6
Actinidia10100 Actinidia chinensis HOM05D005178 ORTHO05D006123 6.6e-13 79.0 249 31.3
BcaC01g05083 Brassica carinata HOM05D005178 ORTHO05D006123 6.6e-13 79.0 97 45.4
Nitab4.5_0003779g0030 Nicotiana tabacum HOM05D005178 ORTHO05D006123 1.5e-12 77.8 252 31.3
vmacro13200 Vaccinium macrocarpon HOM05D005178 ORTHO05D006123 1.9e-12 77.4 256 34.4
Sc23g0005630 Simmondsia chinensis HOM05D002137 ORTHO05D002144 2.5e-12 77.0 205 32.2
Oeu008679.1 Olea europaea HOM05D005178 ORTHO05D006123 3.3e-12 76.6 171 29.2
Peaxi162Scf00099g00191 Petunia axillaris HOM05D005178 ORTHO05D006123 5.6e-12 75.9 237 33.3
TPR.G4707 Trifolium pratense HOM05D005178 ORTHO05D006123 1.0e-10 71.6 247 31.6
THA.LOC104812217 Tarenaya hassleriana HOM05D002137 ORTHO05D002144 3.0e-10 70.1 156 28.2
CAN.G449.55 Capsicum annuum HOM05D002137 ORTHO05D002144 4.0e-10 69.7 186 26.9
TAR375G0073 Trochodendron aralioides HOM05D005178 ORTHO05D006123 4.0e-10 69.7 101 42.6
CSS0050252 Camellia sinensis var. sinensis HOM05D002137 ORTHO05D002144 5.2e-10 69.3 185 27.6
Thhalv10008522m.g Eutrema salsugineum HOM05D002137 ORTHO05D002144 6.8e-10 68.9 156 28.2
BcaC01g05087 Brassica carinata HOM05D001597 ORTHO05D001512 1.5e-09 67.8 173 32.4
HPP92_026775 Vanilla planifolia HOM05D005178 ORTHO05D006123 1.5e-09 67.8 257 31.9
Migut.A00132 Erythranthe guttata HOM05D002137 ORTHO05D002144 5.7e-09 65.9 282 28.0
Aa31LG7G2430 Aethionema arabicum HOM05D002137 ORTHO05D002144 9.8e-09 65.1 155 29.0
GSVIVG01016858001 Vitis vinifera HOM05D002137 ORTHO05D002144 1.3e-08 64.7 185 27.6
SGA_v2.0_scaffold20G09222 Striga asiatica HOM05D002137 ORTHO05D002144 1.7e-08 64.3 254 28.7
THA.LOC104813947 Tarenaya hassleriana HOM05D002137 ORTHO05D002144 5.4e-07 59.3 152 27.0
Carub.0001s1736 Capsella rubella HOM05D002137 ORTHO05D002144 7.0e-07 58.9 157 26.1
Manes.02G211300 Manihot esculenta HOM05D008517 ORTHO05D010482 7.0e-07 58.9 163 28.8
Os01g0195400 Oryza sativa ssp. japonica HOM05D002137 ORTHO05D002144 2.0e-06 57.4 152 30.9
Cpa.g.sc2.275 Carica papaya HOM05D008517 ORTHO05D010482 2.7e-06 57.0 161 29.8
Os01g0574800 Oryza sativa ssp. japonica HOM05D002137 ORTHO05D002144 2.7e-06 57.0 154 29.9
BcaC07g38874 Brassica carinata HOM05D002137 ORTHO05D002144 4.6e-06 56.2 155 27.7
C08p18110 Brassica napus HOM05D002137 ORTHO05D002144 5.9e-06 55.8 155 27.7
BolC8t49445H Brassica oleracea HOM05D002137 ORTHO05D002144 5.9e-06 55.8 155 27.7
Psat3g003480 Pisum sativum HOM05D005178 ORTHO05D006123 7.8e-06 55.5 129 29.5


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