Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p38200 Brassica napus HOM05D003611 ORTHO05D004281 5.2e-198 694.1 333 100.0
BolC2t09835H Brassica oleracea HOM05D003611 ORTHO05D004281 5.2e-198 694.1 333 100.0
BcaC04g24140 Brassica carinata HOM05D003611 ORTHO05D004281 9.5e-59 231.5 545 32.8
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 9.5e-59 231.5 545 32.8
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 9.5e-59 231.5 545 32.8
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 8.0e-58 228.4 543 33.0
Sp6g00840 Schrenkiella parvula HOM05D003611 ORTHO05D004281 8.0e-58 228.4 545 33.6
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 1.1e-57 228.0 545 32.8
BcaC01g06854 Brassica carinata HOM05D003611 ORTHO05D004281 4.1e-54 216.1 526 32.7
C03p38980 Brassica napus HOM05D003611 ORTHO05D004281 1.7e-52 210.7 524 32.4
BcaB05g23959 Brassica carinata HOM05D003611 ORTHO05D004281 6.6e-52 208.8 492 34.6
BcaB01g02283 Brassica carinata HOM05D003611 ORTHO05D004281 1.5e-51 207.6 540 32.0
AL6G52100 Arabidopsis lyrata HOM05D003611 ORTHO05D004281 4.3e-51 206.1 183 59.6
BolC3t16170H Brassica oleracea HOM05D003611 ORTHO05D004281 9.5e-51 204.9 525 32.4
BcaC03g16054 Brassica carinata HOM05D003611 ORTHO05D004281 2.1e-50 203.8 148 74.3
Thhalv10028394m.g Eutrema salsugineum HOM05D003611 ORTHO05D004281 3.6e-50 203.0 553 31.3
BcaB01g02151 Brassica carinata HOM05D003611 ORTHO05D004281 6.8e-49 198.7 490 33.7
A03p31960 Brassica napus HOM05D003611 ORTHO05D004281 1.3e-47 194.5 174 60.9
BraA03t12368Z Brassica rapa HOM05D003611 ORTHO05D004281 1.3e-47 194.5 174 60.9
Carub.0006s3636 Capsella rubella HOM05D003611 ORTHO05D004281 4.9e-47 192.6 176 58.5
AT4G01290 Arabidopsis thaliana HOM05D003611 ORTHO05D004281 3.2e-46 189.9 179 57.5
CARHR249020 Cardamine hirsuta HOM05D003611 ORTHO05D004281 1.1e-38 164.9 180 52.8
BcaC03g16055 Brassica carinata HOM05D003611 ORTHO05D004281 3.6e-34 149.8 76 92.1
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 3.0e-28 130.2 174 48.3
THA.LOC104801395 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 4.8e-26 122.9 241 38.2
THA.LOC104825859 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 1.1e-22 111.7 236 39.4
Aa31LG5G730 Aethionema arabicum HOM05D003611 ORTHO05D004281 7.4e-19 99.0 219 36.1
THA.LOC104817035 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 5.8e-16 89.4 168 40.5
QL04p055101 Quercus lobata HOM05D003611 ORTHO05D004281 2.1e-13 80.9 171 36.3
Cfa003881 Carpinus fangiana HOM05D003611 ORTHO05D004281 2.3e-12 77.4 193 36.3
Hund16671 Selenicereus undatus HOM05D003611 ORTHO05D004281 1.1e-11 75.1 157 36.9
Cpa.g.sc184.26 Carica papaya HOM05D003611 ORTHO05D004281 1.5e-11 74.7 163 39.3
COL.COLO4_12765 Corchorus olitorius HOM05D003611 ORTHO05D004281 1.5e-11 74.7 193 33.7
Thecc.01G353800 Theobroma cacao HOM05D003611 ORTHO05D004281 4.3e-11 73.2 190 35.8
Glyma.18G237600 Glycine max HOM05D003611 ORTHO05D004281 5.7e-11 72.8 184 34.8
CiPaw.01G065700 Carya illinoinensis HOM05D003611 ORTHO05D004281 7.4e-11 72.4 291 31.3
Eucgr.E00101 Eucalyptus grandis HOM05D003611 ORTHO05D004281 1.3e-10 71.6 165 37.0
Glyma.09G255400 Glycine max HOM05D003611 ORTHO05D004281 1.3e-10 71.6 186 35.5
Dinv43856 Davidia involucrata HOM05D003611 ORTHO05D004281 6.2e-10 69.3 186 34.9
CSS0009973 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 8.2e-10 68.9 146 35.6
Lj1g0014988 Lotus japonicus HOM05D003611 ORTHO05D004281 8.2e-10 68.9 179 36.3
VMungo1383G2804 Vigna mungo HOM05D003611 ORTHO05D004281 1.1e-09 68.6 157 38.2
Phvul.008G059100 Phaseolus vulgaris HOM05D003611 ORTHO05D004281 1.4e-09 68.2 153 39.2
CiPaw.02G033900 Carya illinoinensis HOM05D003611 ORTHO05D004281 4.1e-09 66.6 174 33.9
Ca_00818_v3 Cicer arietinum L. HOM05D003611 ORTHO05D004281 4.1e-09 66.6 183 33.3
Ciclev10018621m.g Citrus clementina HOM05D003611 ORTHO05D004281 4.1e-09 66.6 161 35.4
Duzib133G0517 Durio zibethinus HOM05D003611 ORTHO05D004281 5.3e-09 66.2 187 36.4
arahy.Tifrunner.gnm1.ann1.9C73IW Arachis hypogaea HOM05D003611 ORTHO05D004281 9.0e-09 65.5 165 32.7
Manes.05G030300 Manihot esculenta HOM05D003611 ORTHO05D004281 1.5e-08 64.7 177 30.5
Potri.002G163000 Populus trichocarpa HOM05D003611 ORTHO05D004281 1.5e-08 64.7 186 32.8
Haze_15553 Corylus avellana HOM05D003611 ORTHO05D004281 2.0e-08 64.3 135 37.8
arahy.Tifrunner.gnm1.ann1.I9FVBP Arachis hypogaea HOM05D003611 ORTHO05D004281 3.4e-08 63.5 164 31.7
TAR375G0370 Trochodendron aralioides HOM05D003611 ORTHO05D004281 4.5e-08 63.2 183 30.6
Gohir.D11G096500 Gossypium hirsutum HOM05D003611 ORTHO05D004281 1.3e-07 61.6 198 31.3
MD07G1132600 Malus domestica HOM05D003611 ORTHO05D004281 1.7e-07 61.2 195 30.3
MELO3C006087.2 Cucumis melo HOM05D003611 ORTHO05D004281 2.9e-07 60.5 197 33.5
Gohir.A11G091700 Gossypium hirsutum HOM05D003611 ORTHO05D004281 3.8e-07 60.1 166 33.7
TWI59G0398 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 6.5e-07 59.3 181 31.5
Gorai.007G102800 Gossypium raimondii HOM05D003611 ORTHO05D004281 8.4e-07 58.9 198 30.8
Cc02_g38450 Coffea canephora HOM05D003611 ORTHO05D004281 1.1e-06 58.5 185 31.4
CsaV3_3G008680 Cucumis sativus L. HOM05D003611 ORTHO05D004281 1.4e-06 58.2 197 32.0
Nn1g01656 Nelumbo nucifera HOM05D003611 ORTHO05D004281 1.4e-06 58.2 180 31.1
Sed0010511 Sechium edule HOM05D003611 ORTHO05D004281 1.4e-06 58.2 175 33.1
Aqoxy7G00231 Aquilegia oxysepala HOM05D003611 ORTHO05D004281 1.9e-06 57.8 178 31.5
TAR374G0905 Trochodendron aralioides HOM05D003611 ORTHO05D004281 1.9e-06 57.8 151 31.8
FvH4_7g15120 Fragaria vesca HOM05D003611 ORTHO05D004281 2.5e-06 57.4 193 29.0
FAN06G0771 Fragaria x ananassa HOM05D003611 ORTHO05D004281 2.5e-06 57.4 193 29.0
Manes.01G253100 Manihot esculenta HOM05D003611 ORTHO05D004281 4.2e-06 56.6 126 32.5
FAN06G4234 Fragaria x ananassa HOM05D003611 ORTHO05D004281 5.5e-06 56.2 193 29.0
MD01G1069900 Malus domestica HOM05D003611 ORTHO05D004281 5.5e-06 56.2 167 31.7
RcHm_v2.0_Chr1g0357311 Rosa chinensis HOM05D003611 ORTHO05D004281 5.5e-06 56.2 191 29.3
FAN10G1370 Fragaria x ananassa HOM05D003611 ORTHO05D004281 9.3e-06 55.5 193 28.5


User provided reference genes

Program Settings