Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p38080 Brassica napus HOM05D000108 ORTHO05D018756 2.4e-63 245.4 124 100.0
BolC2t09823H Brassica oleracea HOM05D000108 ORTHO05D018756 1.2e-59 233.0 124 96.8
C07p11090 Brassica napus HOM05D000108 ORTHO05D018756 1.1e-57 226.5 124 95.2
BolC7t41580H Brassica oleracea HOM05D000108 ORTHO05D018756 1.5e-57 226.1 123 95.1
A01p26440 Brassica napus HOM05D000108 ORTHO05D001149 6.3e-24 114.4 85 72.9
BolC1t03310H Brassica oleracea HOM05D000108 ORTHO05D001149 6.3e-24 114.4 85 72.9
BraA01t02568Z Brassica rapa HOM05D000108 ORTHO05D001149 6.3e-24 114.4 85 72.9
BcaB05g23477 Brassica carinata HOM05D000108 ORTHO05D001149 2.4e-23 112.5 85 71.8
Thhalv10002384m.g Eutrema salsugineum HOM05D000108 ORTHO05D001149 2.4e-23 112.5 85 70.6
BcaC09g49719 Brassica carinata HOM05D000108 ORTHO05D001149 9.1e-23 110.5 85 71.8
C01p33640 Brassica napus HOM05D000108 ORTHO05D001149 9.1e-23 110.5 85 71.8
Carub.0005s1169 Capsella rubella HOM05D000108 ORTHO05D001149 1.6e-22 109.8 85 69.4
AT3G45850 Arabidopsis thaliana HOM05D000108 ORTHO05D001149 3.5e-22 108.6 85 67.1
CARHR154150 Cardamine hirsuta HOM05D000108 ORTHO05D001149 4.5e-22 108.2 85 68.2
AL5G24530 Arabidopsis lyrata HOM05D000108 ORTHO05D001149 1.0e-21 107.1 85 65.9
Sp5g15680 Schrenkiella parvula HOM05D000108 ORTHO05D001149 6.5e-21 104.4 85 65.9
Aa31LG4G15070 Aethionema arabicum HOM05D000108 ORTHO05D001149 8.0e-19 97.4 85 62.4
THA.LOC104799469 Tarenaya hassleriana HOM05D000108 ORTHO05D001149 2.3e-18 95.9 85 58.8
Cpa.g.sc139.8 Carica papaya HOM05D000108 ORTHO05D001149 1.2e-14 83.6 84 51.2
BcaC03g16087 Brassica carinata HOM05D000108 ORTHO05D018756 1.7e-13 79.7 68 66.2
Ciclev10027728m.g Citrus clementina HOM05D000108 ORTHO05D001149 1.7e-13 79.7 84 50.0
Dinv02790 Davidia involucrata HOM05D000108 ORTHO05D001149 2.2e-13 79.3 84 48.8
GSVIVG01025071001 Vitis vinifera HOM05D000108 ORTHO05D001149 2.2e-13 79.3 82 51.2
COL.COLO4_18411 Corchorus olitorius HOM05D000108 ORTHO05D001149 3.8e-13 78.6 85 49.4
Manes.04G028300 Manihot esculenta HOM05D000108 ORTHO05D001149 3.8e-13 78.6 85 49.4
Thecc.09G332700 Theobroma cacao HOM05D000108 ORTHO05D001149 3.8e-13 78.6 85 49.4
Atru.chr3.3778 Acer truncatum HOM05D000108 ORTHO05D001149 8.5e-13 77.4 84 47.6
CSS0041728 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D001149 1.9e-12 76.3 120 39.2
Actinidia07086 Actinidia chinensis HOM05D000108 ORTHO05D001149 2.5e-12 75.9 119 38.7
Cc01_g12000 Coffea canephora HOM05D000108 ORTHO05D001149 2.5e-12 75.9 87 47.1
Duzib150G0072 Durio zibethinus HOM05D000108 ORTHO05D001149 2.5e-12 75.9 85 49.4
Duzib170G0496 Durio zibethinus HOM05D000108 ORTHO05D001149 2.5e-12 75.9 85 48.2
Gohir.A05G099500 Gossypium hirsutum HOM05D000108 ORTHO05D001149 2.5e-12 75.9 85 49.4
Gohir.D05G099400 Gossypium hirsutum HOM05D000108 ORTHO05D001149 2.5e-12 75.9 85 49.4
Gorai.009G103300 Gossypium raimondii HOM05D000108 ORTHO05D001149 2.5e-12 75.9 85 49.4
Gorai.003G138600 Gossypium raimondii HOM05D000108 ORTHO05D001149 3.2e-12 75.5 85 48.2
Actinidia37269 Actinidia chinensis HOM05D000108 ORTHO05D001149 7.2e-12 74.3 84 45.2
Duzib168G1926 Durio zibethinus HOM05D000108 ORTHO05D001149 7.2e-12 74.3 85 47.1
Gohir.D03G131700 Gossypium hirsutum HOM05D000108 ORTHO05D001149 7.2e-12 74.3 85 48.2
Phvul.L002157 Phaseolus vulgaris HOM05D000108 ORTHO05D001149 2.1e-11 72.8 84 44.0
Rhsim13G0089400 Rhododendron simsii HOM05D000108 ORTHO05D001149 2.1e-11 72.8 119 37.8
vmacro03137 Vaccinium macrocarpon HOM05D000108 ORTHO05D001149 2.1e-11 72.8 119 37.8
Glyma.13G330600 Glycine max HOM05D000108 ORTHO05D001149 2.7e-11 72.4 84 44.0
Manes.11G137400 Manihot esculenta HOM05D000108 ORTHO05D001149 2.7e-11 72.4 120 39.2
Potri.009G026000 Populus trichocarpa HOM05D000108 ORTHO05D001149 2.7e-11 72.4 85 43.5
CANSAT54G1698 Cannabis sativa HOM05D000108 ORTHO05D001149 3.6e-11 72.0 84 44.0
MBI14_g42160_MAGBIO Magnolia biondii HOM05D000108 ORTHO05D001149 3.6e-11 72.0 84 45.2
Sed0013938 Sechium edule HOM05D000108 ORTHO05D001149 4.7e-11 71.6 85 45.9
VMungo1080G1229 Vigna mungo HOM05D000108 ORTHO05D001149 4.7e-11 71.6 84 42.9
Glyma.11G147108 Glycine max HOM05D000108 ORTHO05D001149 6.1e-11 71.2 84 42.9
PSO339G0953 Papaver somniferum HOM05D000108 ORTHO05D001149 6.1e-11 71.2 85 44.7
PSO384G2763 Papaver somniferum HOM05D000108 ORTHO05D001149 6.1e-11 71.2 85 44.7
QL01p035162 Quercus lobata HOM05D000108 ORTHO05D001149 6.1e-11 71.2 84 44.0
MD11G1118200 Malus domestica HOM05D000108 ORTHO05D001149 8.0e-11 70.9 84 42.9
Gohir.A03G036500 Gossypium hirsutum HOM05D000108 ORTHO05D001149 1.0e-10 70.5 85 47.1
ClCG03G001810 Citrullus lanatus HOM05D000108 ORTHO05D001149 1.4e-10 70.1 85 44.7
MELO3C020688.2 Cucumis melo HOM05D000108 ORTHO05D001149 1.4e-10 70.1 85 44.7
CsaV3_1G033760 Cucumis sativus L. HOM05D000108 ORTHO05D001149 1.4e-10 70.1 85 44.7
ECA236G0719 Erigeron canadensis HOM05D000108 ORTHO05D001149 1.4e-10 70.1 89 44.9
CiPaw.13G102700 Carya illinoinensis HOM05D000108 ORTHO05D001149 1.8e-10 69.7 84 42.9
FvH4_3g34440 Fragaria vesca HOM05D000108 ORTHO05D001149 1.8e-10 69.7 82 46.3
FAN11G1183 Fragaria x ananassa HOM05D000108 ORTHO05D001149 1.8e-10 69.7 82 46.3
Sabra16G0140000 Salix brachista HOM05D000108 ORTHO05D001149 1.8e-10 69.7 84 45.2
Prupe.6G088500 Prunus persica HOM05D000108 ORTHO05D001149 2.3e-10 69.3 84 45.2
TAR636G0183 Trochodendron aralioides HOM05D000108 ORTHO05D001149 2.3e-10 69.3 84 45.2
FAN16G0704 Fragaria x ananassa HOM05D000108 ORTHO05D001149 4.0e-10 68.6 82 45.1
FAN21G0560 Fragaria x ananassa HOM05D000108 ORTHO05D001149 4.0e-10 68.6 82 45.1
FAN25G2360 Fragaria x ananassa HOM05D000108 ORTHO05D001149 4.0e-10 68.6 82 45.1
Sed0002914 Sechium edule HOM05D000108 ORTHO05D001149 4.0e-10 68.6 85 43.5
Sc12g0001870 Simmondsia chinensis HOM05D000108 ORTHO05D001149 4.0e-10 68.6 83 44.6
Glyma.15G043400 Glycine max HOM05D000108 ORTHO05D001149 5.2e-10 68.2 84 42.9
HanXRQChr04g0110361 Helianthus annuus HOM05D000108 ORTHO05D001149 8.8e-10 67.4 84 41.7
Nitab4.5_0003784g0020 Nicotiana tabacum HOM05D000108 ORTHO05D001149 8.8e-10 67.4 84 44.0
Lj1A178T40 Lonicera japonica HOM05D000108 ORTHO05D001149 1.2e-09 67.0 94 41.5
Phvul.011G070000 Phaseolus vulgaris HOM05D000108 ORTHO05D001149 1.2e-09 67.0 84 41.7
Potri.001G233700 Populus trichocarpa HOM05D000108 ORTHO05D001149 1.2e-09 67.0 84 44.0
Haze_23988 Corylus avellana HOM05D000108 ORTHO05D001149 1.5e-09 66.6 115 37.4
Haze_23992 Corylus avellana HOM05D000108 ORTHO05D001149 1.5e-09 66.6 115 37.4
Dinv35678 Davidia involucrata HOM05D000108 ORTHO05D001149 1.5e-09 66.6 85 45.9
Peaxi162Scf00072g00021 Petunia axillaris HOM05D000108 ORTHO05D001149 1.5e-09 66.6 84 44.0
PGSC0003DMG400015544 Solanum tuberosum HOM05D000108 ORTHO05D001149 1.5e-09 66.6 84 44.0
TPR.G11605 Trifolium pratense HOM05D000108 ORTHO05D001149 1.5e-09 66.6 84 39.3
Cfa011412 Carpinus fangiana HOM05D000108 ORTHO05D001149 2.0e-09 66.2 82 42.7
RcHm_v2.0_Chr5g0062081 Rosa chinensis HOM05D000108 ORTHO05D001149 2.0e-09 66.2 82 45.1
Sc21g0005340 Simmondsia chinensis HOM05D000108 ORTHO05D001149 2.0e-09 66.2 120 35.8
CAN.G84.2 Capsicum annuum HOM05D000108 ORTHO05D001149 2.6e-09 65.9 84 44.0
AUR62001858 Chenopodium quinoa HOM05D000108 ORTHO05D001149 2.6e-09 65.9 85 40.0
HanXRQChr05g0133911 Helianthus annuus HOM05D000108 ORTHO05D001149 2.6e-09 65.9 89 41.6
Nitab4.5_0002380g0100 Nicotiana tabacum HOM05D000108 ORTHO05D001149 2.6e-09 65.9 84 42.9
Solyc11g072820.3 Solanum lycopersicum HOM05D000108 ORTHO05D001149 2.6e-09 65.9 84 44.0
Sopen11g030490 Solanum pennellii HOM05D000108 ORTHO05D001149 2.6e-09 65.9 84 44.0
arahy.Tifrunner.gnm1.ann1.QN0DU3 Arachis hypogaea HOM05D000108 ORTHO05D001149 3.4e-09 65.5 83 43.4
CAN.G394.9 Capsicum annuum HOM05D000108 ORTHO05D001149 3.4e-09 65.5 119 38.7
ECA248G0078 Erigeron canadensis HOM05D000108 ORTHO05D001149 3.4e-09 65.5 84 41.7
ECA248G3318 Erigeron canadensis HOM05D000108 ORTHO05D001149 3.4e-09 65.5 84 41.7
Lj3g0021793 Lotus japonicus HOM05D000108 ORTHO05D001149 3.4e-09 65.5 84 39.3
TWI79G1415 Tripterygium wilfordii HOM05D000108 ORTHO05D001149 3.4e-09 65.5 83 42.2
SGA_v2.0_scaffold104G30113 Striga asiatica HOM05D000108 ORTHO05D001149 4.4e-09 65.1 119 38.7
THA.LOC104826348 Tarenaya hassleriana HOM05D000108 ORTHO05D001149 4.4e-09 65.1 81 40.7
VMungo1127G1903 Vigna mungo HOM05D000108 ORTHO05D001149 4.4e-09 65.1 89 40.4
Glyma.12G074300 Glycine max HOM05D000108 ORTHO05D001149 5.7e-09 64.7 84 40.5
MD03G1105800 Malus domestica HOM05D000108 ORTHO05D001149 5.7e-09 64.7 85 43.5
Nn2g10569 Nelumbo nucifera HOM05D000108 ORTHO05D001149 5.7e-09 64.7 82 40.2
Nitab4.5_0000182g0040 Nicotiana tabacum HOM05D000108 ORTHO05D001149 5.7e-09 64.7 119 36.1
TAR633G1860 Trochodendron aralioides HOM05D000108 ORTHO05D001149 5.7e-09 64.7 84 44.0
Migut.N02645 Erythranthe guttata HOM05D000108 ORTHO05D001149 7.5e-09 64.3 85 43.5
Lsat_1_v5_gn_5_166981 Lactuca sativa HOM05D000108 ORTHO05D001149 7.5e-09 64.3 84 40.5
Medtr2g096010 Medicago truncatula HOM05D000108 ORTHO05D001149 7.5e-09 64.3 84 39.3
Psat5g281840 Pisum sativum HOM05D000108 ORTHO05D001149 7.5e-09 64.3 84 38.1
EL10Ac7g15934 Beta vulgaris HOM05D000108 ORTHO05D001149 9.8e-09 63.9 86 40.7
PGR119G0104 Punica granatum HOM05D000108 ORTHO05D001149 9.8e-09 63.9 83 41.0
SalBow3G2091 Salvia bowleyana HOM05D000108 ORTHO05D001149 9.8e-09 63.9 85 44.7
Os05g0117798 Oryza sativa ssp. japonica HOM05D000108 ORTHO05D001149 1.3e-08 63.5 85 43.5
arahy.Tifrunner.gnm1.ann1.2070QL Arachis hypogaea HOM05D000108 ORTHO05D001149 1.7e-08 63.2 84 38.1
FAN25G0698 Fragaria x ananassa HOM05D000108 ORTHO05D011597 1.7e-08 63.2 82 42.7
Lsat_1_v5_gn_8_76521 Lactuca sativa HOM05D000108 ORTHO05D001149 1.7e-08 63.2 89 42.7
Lalb_Chr19g0137571 Lupinus albus HOM05D000108 ORTHO05D001149 1.7e-08 63.2 84 42.9
TWI31G0805 Tripterygium wilfordii HOM05D000108 ORTHO05D001149 1.7e-08 63.2 83 41.0
AUR62009653 Chenopodium quinoa HOM05D000108 ORTHO05D001149 2.2e-08 62.8 85 37.6
Hma1.2p1_0700F.1_g205780 Hydrangea macrophylla HOM05D000108 ORTHO05D018756 2.2e-08 62.8 59 54.2
Hma1.2p1_2948F.1_g330680 Hydrangea macrophylla HOM05D000108 ORTHO05D018756 2.2e-08 62.8 56 55.4
Lalb_Chr14g0374921 Lupinus albus HOM05D000108 ORTHO05D001149 2.2e-08 62.8 84 38.1
Nn2g12816 Nelumbo nucifera HOM05D000108 ORTHO05D001149 2.2e-08 62.8 120 33.3
Solyc06g075580.4 Solanum lycopersicum HOM05D000108 ORTHO05D001149 2.8e-08 62.4 84 44.0
Sopen06g031970 Solanum pennellii HOM05D000108 ORTHO05D001149 3.7e-08 62.0 84 42.9
Ah.08g215030 Amaranthus hybridus HOM05D000108 ORTHO05D001149 4.9e-08 61.6 85 38.8
Aqoxy4G03111 Aquilegia oxysepala HOM05D000108 ORTHO05D001149 6.3e-08 61.2 85 42.4
arahy.Tifrunner.gnm1.ann1.CITF9E Arachis hypogaea HOM05D000108 ORTHO05D001149 6.3e-08 61.2 85 40.0
RhsimUnG0121300 Rhododendron simsii HOM05D000108 ORTHO05D001149 8.3e-08 60.8 86 39.5
Thhalv10016147m.g Eutrema salsugineum HOM05D000108 ORTHO05D001149 1.4e-07 60.1 81 43.2
Medtr0440s0020 Medicago truncatula HOM05D000163 ORTHO05D018756 1.4e-07 60.1 70 41.4
Peaxi162Scf00836g00218 Petunia axillaris HOM05D000108 ORTHO05D001149 1.4e-07 60.1 84 40.5
Oeu058513.1 Olea europaea HOM05D000108 ORTHO05D001149 1.8e-07 59.7 84 41.7
Zm00001eb265660 Zea mays HOM05D000108 ORTHO05D001149 1.8e-07 59.7 83 42.2
Lalb_Chr22g0350061 Lupinus albus HOM05D000108 ORTHO05D001149 2.4e-07 59.3 84 35.7
BolC6t37314H Brassica oleracea HOM05D000313 ORTHO05D011597 4.1e-07 58.5 118 36.4
Carub.0004s0959 Capsella rubella HOM05D000108 ORTHO05D001149 4.1e-07 58.5 81 40.7
CDE09G0015 Ceratophyllum demersum HOM05D000108 ORTHO05D001149 5.4e-07 58.2 85 41.2
AT2G28620 Arabidopsis thaliana HOM05D000108 ORTHO05D001149 7.0e-07 57.8 83 38.6
vmacro20089 Vaccinium macrocarpon HOM05D000108 ORTHO05D001149 1.2e-06 57.0 123 34.1
CDE02G1599 Ceratophyllum demersum HOM05D000108 ORTHO05D001149 2.0e-06 56.2 87 46.0
Aa31LG5G7600 Aethionema arabicum HOM05D000108 ORTHO05D001149 3.5e-06 55.5 81 39.5
BcaB06g28234 Brassica carinata HOM05D000108 ORTHO05D001149 5.9e-06 54.7 80 43.8
C06p21290 Brassica napus HOM05D000108 ORTHO05D011597 5.9e-06 54.7 116 35.3
Eucgr.B02433 Eucalyptus grandis HOM05D000108 ORTHO05D001149 7.7e-06 54.3 83 36.1
THA.LOC104815761 Tarenaya hassleriana HOM05D000108 ORTHO05D001149 7.7e-06 54.3 59 44.1


User provided reference genes

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