Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p37980 Brassica napus HOM05D019666 ORTHO05D028044 1.5e-98 362.8 182 100.0
BolC2t09814H Brassica oleracea HOM05D019666 ORTHO05D028044 5.4e-48 194.9 98 100.0
BolC3t19372H Brassica oleracea HOM05D019666 ORTHO05D028044 2.3e-43 179.5 98 92.9
BraA07t28165Z Brassica rapa HOM05D019666 ORTHO05D028044 1.1e-35 154.1 99 83.8
A07p03770 Brassica napus HOM05D063373 ORTHO05D097479 1.5e-18 97.1 64 81.2
A02p12190 Brassica napus HOM05D063373 ORTHO05D100468 2.6e-18 96.3 54 90.7
BcaC04g22409 Brassica carinata HOM05D005044 ORTHO05D000065 1.5e-13 80.5 138 44.2
BcaC03g14692 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-13 79.3 140 44.3
BcaC04g18697 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-13 79.3 203 35.0
C01p13630 Brassica napus HOM05D019666 ORTHO05D039882 9.6e-13 77.8 78 61.5
C05p31210 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-12 77.0 143 39.9
BcaC09g51392 Brassica carinata HOM05D019666 ORTHO05D039882 3.6e-12 75.9 78 60.3
C08p09500 Brassica napus HOM05D000096 ORTHO05D000045 6.2e-12 75.1 133 42.9
BcaC02g08524 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-11 73.6 130 41.5
C04p53440 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-11 72.4 156 38.5
BolC4t26899H Brassica oleracea HOM05D000313 ORTHO05D000065 4.0e-11 72.4 156 38.5
BraA09t40035Z Brassica rapa HOM05D000313 ORTHO05D000065 6.9e-11 71.6 152 36.8
A09p41290 Brassica napus HOM05D008070 ORTHO05D001888 9.0e-11 71.2 152 38.2
C03p73900 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-10 70.9 137 39.4
A06p37320 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-10 70.1 119 40.3
BolC7t43481H Brassica oleracea HOM05D000305 ORTHO05D000065 5.8e-10 68.6 131 38.2
BraA08t32937Z Brassica rapa HOM05D000313 ORTHO05D000065 5.8e-10 68.6 149 37.6
BraSC39t46194Z Brassica rapa HOM05D013769 ORTHO05D016089 5.8e-10 68.6 119 44.5
C04p23330 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-09 67.0 160 34.4
C05p00200 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-09 66.6 149 36.9
C07p05180 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-09 66.6 149 36.9
C06p47470 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-09 65.5 149 36.9
BcaC03g16108 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-08 64.3 160 33.1
BcaC02g10952 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-08 63.5 159 32.7
BcaB05g24332 Brassica carinata HOM05D000313 ORTHO05D000065 9.3e-08 61.2 162 35.2
A10p33690 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-08 61.2 38 78.9
BolC2t10493H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-07 59.7 123 38.2
C02p46330 Brassica napus HOM05D000313 ORTHO05D021935 3.5e-07 59.3 100 43.0
C05p19930 Brassica napus HOM05D001920 ORTHO05D024365 6.0e-07 58.5 35 77.1
BolC3t15032H Brassica oleracea HOM05D000305 ORTHO05D000065 6.0e-07 58.5 35 80.0
C04p23610 Brassica napus HOM05D000313 ORTHO05D000065 7.9e-07 58.2 137 36.5
BolC9t54870H Brassica oleracea HOM05D000313 ORTHO05D000065 7.9e-07 58.2 113 39.8
BcaB05g24149 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-06 57.8 66 50.0
C09p30920 Brassica napus HOM05D000313 ORTHO05D016800 1.0e-06 57.8 137 39.4
BcaC08g46159 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-06 57.0 35 77.1
BolC2t08209H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-06 56.6 35 77.1
BolC6t37050H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-06 56.6 34 79.4
BolC9t55047H Brassica oleracea HOM05D013219 ORTHO05D013032 2.3e-06 56.6 133 37.6
BcaB04g17642 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-06 56.2 34 79.4
BcaB06g25574 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-06 56.2 35 77.1
BolC5t30691H Brassica oleracea HOM05D001920 ORTHO05D024365 3.0e-06 56.2 33 78.8
BcaC02g10925 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-06 55.8 115 37.4
C03p67840 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-06 55.8 35 74.3
C08p01640 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-06 55.8 35 74.3
BolC8t46967H Brassica oleracea HOM05D000313 ORTHO05D000065 3.9e-06 55.8 95 42.1
BolSC21t60252H Brassica oleracea HOM05D000313 ORTHO05D000065 3.9e-06 55.8 35 74.3
BraA09t39622Z Brassica rapa HOM05D008070 ORTHO05D001888 6.7e-06 55.1 55 54.5
BcaB07g32488 Brassica carinata HOM05D000313 ORTHO05D000065 8.7e-06 54.7 84 41.7
BcaC05g26730 Brassica carinata HOM05D000313 ORTHO05D000065 8.7e-06 54.7 35 74.3


User provided reference genes

Program Settings