Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p37780 Brassica napus HOM05D000138 ORTHO05D023918 4.7e-73 277.7 134 100.0
BolC2t09794H Brassica oleracea HOM05D000138 ORTHO05D023918 8.2e-62 240.4 134 90.3
C02p20370 Brassica napus HOM05D000138 ORTHO05D023918 2.8e-46 188.7 134 70.9
BolC2t08168H Brassica oleracea HOM05D000138 ORTHO05D023918 5.9e-44 181.0 137 71.5
C05p11540 Brassica napus HOM05D001350 ORTHO05D032649 1.8e-16 89.7 48 89.6
BcaC03g14589 Brassica carinata HOM05D000138 ORTHO05D023918 3.0e-11 72.4 84 53.6
C03p31440 Brassica napus HOM05D000138 ORTHO05D000078 4.3e-10 68.6 99 42.4
BolC3t15492H Brassica oleracea HOM05D000138 ORTHO05D000078 4.3e-10 68.6 99 42.4
BraA03t11845Z Brassica rapa HOM05D000138 ORTHO05D000078 4.3e-10 68.6 99 42.4
BcaB01g03108 Brassica carinata HOM05D000138 ORTHO05D000078 1.2e-09 67.0 95 42.1
BcaC01g04982 Brassica carinata HOM05D000138 ORTHO05D000078 1.2e-09 67.0 99 41.4
A03p26310 Brassica napus HOM05D000138 ORTHO05D000078 3.6e-09 65.5 99 41.4
Lj1A181T23 Lonicera japonica HOM05D000138 ORTHO05D000078 1.5e-07 60.1 46 63.0
BcaC01g01327 Brassica carinata HOM05D000138 ORTHO05D032089 7.6e-07 57.8 109 38.5
Sp4g11380 Schrenkiella parvula HOM05D000138 ORTHO05D000078 7.6e-07 57.8 30 83.3
AL4G23050 Arabidopsis lyrata HOM05D000138 ORTHO05D000078 1.3e-06 57.0 30 83.3
AT2G28550 Arabidopsis thaliana HOM05D000138 ORTHO05D000078 1.3e-06 57.0 30 83.3
BcaB02g10171 Brassica carinata HOM05D000138 ORTHO05D000078 1.3e-06 57.0 30 83.3
BcaC02g10976 Brassica carinata HOM05D000138 ORTHO05D000078 1.3e-06 57.0 30 83.3
A07p19090 Brassica napus HOM05D000138 ORTHO05D000078 1.3e-06 57.0 30 83.3
C04p22720 Brassica napus HOM05D000138 ORTHO05D000078 1.3e-06 57.0 30 83.3
BolC4t23771H Brassica oleracea HOM05D000138 ORTHO05D000078 1.3e-06 57.0 30 83.3
BraA07t29616Z Brassica rapa HOM05D000138 ORTHO05D000078 1.3e-06 57.0 30 83.3
Carub.0004s0952 Capsella rubella HOM05D000138 ORTHO05D000078 1.3e-06 57.0 30 83.3
CARHR121560 Cardamine hirsuta HOM05D000138 ORTHO05D000078 1.3e-06 57.0 30 83.3
SGA_v2.0_scaffold146G36243 Striga asiatica HOM05D000138 ORTHO05D000078 1.7e-06 56.6 50 58.0
Prupe.2G220100 Prunus persica HOM05D000138 ORTHO05D000078 2.9e-06 55.8 30 80.0
vmacro03145 Vaccinium macrocarpon HOM05D000138 ORTHO05D000078 2.9e-06 55.8 38 65.8
MSTRG.27449 Avicennia marina HOM05D000138 ORTHO05D000078 3.8e-06 55.5 30 76.7
AUR62027900 Chenopodium quinoa HOM05D000138 ORTHO05D000078 3.8e-06 55.5 69 42.0
ClCG02G013820 Citrullus lanatus HOM05D000138 ORTHO05D000078 3.8e-06 55.5 88 37.5
MD07G1180900 Malus domestica HOM05D000138 ORTHO05D000078 4.9e-06 55.1 37 64.9
Thhalv10016626m.g Eutrema salsugineum HOM05D000138 ORTHO05D000078 6.4e-06 54.7 30 80.0
Lsat_1_v5_gn_8_18040 Lactuca sativa HOM05D000138 ORTHO05D000078 6.4e-06 54.7 94 35.1
SalBow3G2198 Salvia bowleyana HOM05D000138 ORTHO05D000078 6.4e-06 54.7 38 65.8
SHI12584 Sapria himalayana HOM05D000138 ORTHO05D000078 6.4e-06 54.7 30 73.3
SGA_v2.0_scaffold329G48845 Striga asiatica HOM05D000138 ORTHO05D000078 8.4e-06 54.3 30 76.7
SGA_v2.0_scaffold62G21449 Striga asiatica HOM05D000138 ORTHO05D000078 8.4e-06 54.3 30 76.7


User provided reference genes

Program Settings