Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p37620 Brassica napus HOM05D043129 ORTHO05D009446 9.6e-161 570.1 283 100.0
BolC2t09775H Brassica oleracea HOM05D043129 ORTHO05D009446 5.2e-98 361.7 203 89.2
Thhalv10019584m.g Eutrema salsugineum HOM05D007391 ORTHO05D009446 2.3e-37 160.2 229 47.2
BcaB02g07296 Brassica carinata HOM05D007391 ORTHO05D009446 5.3e-34 149.1 193 51.3
BcaC08g45291 Brassica carinata HOM05D007391 ORTHO05D009446 2.0e-33 147.1 192 51.0
C06p28930 Brassica napus HOM05D007391 ORTHO05D009446 2.0e-33 147.1 192 51.0
BolC6t38059H Brassica oleracea HOM05D007391 ORTHO05D009446 2.0e-33 147.1 192 51.0
CARHR074420 Cardamine hirsuta HOM05D007391 ORTHO05D009446 2.2e-32 143.7 192 49.0
A07p26510 Brassica napus HOM05D007391 ORTHO05D009446 3.8e-32 142.9 199 46.2
BraA07t30294Z Brassica rapa HOM05D007391 ORTHO05D009446 3.8e-32 142.9 199 46.2
Sp5g35720 Schrenkiella parvula HOM05D007391 ORTHO05D009446 4.9e-32 142.5 192 50.5
BraA02t07376Z Brassica rapa HOM05D007391 ORTHO05D009446 3.2e-31 139.8 87 78.2
AT1G80080 Arabidopsis thaliana HOM05D007391 ORTHO05D009446 1.1e-28 131.3 193 44.0
Aa31LG4G360 Aethionema arabicum HOM05D007391 ORTHO05D009446 4.0e-26 122.9 227 37.9
AL2G41460 Arabidopsis lyrata HOM05D007391 ORTHO05D009446 5.8e-25 119.0 184 42.9
Actinidia01743 Actinidia chinensis HOM05D007391 ORTHO05D009446 4.5e-17 92.8 301 28.9
Psat5g302680 Pisum sativum HOM05D007391 ORTHO05D009446 5.9e-17 92.4 210 33.3
Thecc.06G025300 Theobroma cacao HOM05D007391 ORTHO05D009446 7.7e-17 92.0 126 42.1
Hma1.2p1_0017F.1_g011310 Hydrangea macrophylla HOM05D007391 ORTHO05D009446 1.4e-15 87.8 97 46.4
Gohir.D05G123900 Gossypium hirsutum HOM05D007391 ORTHO05D009446 1.2e-14 84.7 133 39.1
Gorai.009G127900 Gossypium raimondii HOM05D007391 ORTHO05D009446 1.2e-14 84.7 133 39.1
MSTRG.4707 Avicennia marina HOM05D007391 ORTHO05D009446 3.6e-14 83.2 208 31.2
Duzib235G1403 Durio zibethinus HOM05D007391 ORTHO05D009446 3.6e-14 83.2 129 41.1
Ca_01054_v3 Cicer arietinum L. HOM05D000085 ORTHO05D001615 4.6e-14 82.8 262 30.2
Medtr2g103940 Medicago truncatula HOM05D007391 ORTHO05D009446 1.4e-13 81.3 92 46.7
Dinv38125 Davidia involucrata HOM05D007391 ORTHO05D009446 1.1e-12 78.2 387 27.1
Nn8g39512 Nelumbo nucifera HOM05D007391 ORTHO05D009446 1.1e-12 78.2 189 29.1
PSO675G3521 Papaver somniferum HOM05D007391 ORTHO05D009446 2.8e-11 73.6 85 45.9
Eucgr.J03068 Eucalyptus grandis HOM05D007391 ORTHO05D009446 1.8e-10 70.9 180 30.0
Lsat_1_v5_gn_1_34341 Lactuca sativa HOM05D007391 ORTHO05D009446 1.8e-10 70.9 85 42.4
Gohir.A05G123000 Gossypium hirsutum HOM05D007391 ORTHO05D009446 2.4e-10 70.5 133 34.6
Migut.D01074 Erythranthe guttata HOM05D007391 ORTHO05D009446 2.6e-09 67.0 120 36.7
THA.LOC104812512 Tarenaya hassleriana HOM05D007391 ORTHO05D009446 3.4e-09 66.6 234 29.5
Cfa001957 Carpinus fangiana HOM05D007391 ORTHO05D001615 1.7e-08 64.3 164 31.1
CANSAT56G1818 Cannabis sativa HOM05D007391 ORTHO05D009446 5.0e-08 62.8 191 29.8
Cpa.g.sc390.6 Carica papaya HOM05D007391 ORTHO05D009446 5.0e-08 62.8 230 30.0
Potri.001G202100 Populus trichocarpa HOM05D007391 ORTHO05D009446 6.5e-08 62.4 88 38.6
PGR031G3861 Punica granatum HOM05D007391 ORTHO05D009446 6.5e-08 62.4 101 34.7
AUR62011514 Chenopodium quinoa HOM05D007391 ORTHO05D009446 1.9e-07 60.8 186 27.4
SalBow6G6709 Salvia bowleyana HOM05D007391 ORTHO05D009446 1.9e-07 60.8 356 22.2
Sabra01G0159600 Salix brachista HOM05D007391 ORTHO05D009446 2.5e-07 60.5 185 29.7
CSS0027290 Camellia sinensis var. sinensis HOM05D007391 ORTHO05D009446 4.2e-07 59.7 60 50.0
CSS0028859 Camellia sinensis var. sinensis HOM05D007391 ORTHO05D009446 4.2e-07 59.7 60 50.0
Ciclev10025464m.g Citrus clementina HOM05D007391 ORTHO05D009446 4.2e-07 59.7 101 36.6
MD17G1212400 Malus domestica HOM05D007391 ORTHO05D009446 4.2e-07 59.7 87 36.8
Aqoxy7G03657 Aquilegia oxysepala HOM05D007391 ORTHO05D009446 5.5e-07 59.3 102 31.4
FvH4_6g29640 Fragaria vesca HOM05D007391 ORTHO05D009446 5.5e-07 59.3 51 52.9
FAN14G5578 Fragaria x ananassa HOM05D007391 ORTHO05D009446 5.5e-07 59.3 51 52.9
FAN02G3910 Fragaria x ananassa HOM05D007391 ORTHO05D009446 7.2e-07 58.9 51 52.9
FAN05G3463 Fragaria x ananassa HOM05D007391 ORTHO05D009446 7.2e-07 58.9 51 52.9
SalBow6G7005 Salvia bowleyana HOM05D007391 ORTHO05D009446 7.2e-07 58.9 354 22.0
Manes.11G057100 Manihot esculenta HOM05D007391 ORTHO05D009446 9.4e-07 58.5 80 42.5
Sc22g0002870 Simmondsia chinensis HOM05D000517 ORTHO05D003374 9.4e-07 58.5 111 36.0
FAN09G3908 Fragaria x ananassa HOM05D007391 ORTHO05D009446 1.6e-06 57.8 51 51.0
Glyma.13G365900 Glycine max HOM05D007391 ORTHO05D009446 1.6e-06 57.8 89 40.4
TWI12G0860 Tripterygium wilfordii HOM05D007391 ORTHO05D009446 1.6e-06 57.8 150 29.3
AUR62016333 Chenopodium quinoa HOM05D007391 ORTHO05D001615 2.1e-06 57.4 171 26.9
Oeu039680.1 Olea europaea HOM05D006470 ORTHO05D007978 2.7e-06 57.0 174 28.2
Haze_16564 Corylus avellana HOM05D007391 ORTHO05D009446 3.6e-06 56.6 164 29.9
Peaxi162Scf00034g00145 Petunia axillaris HOM05D007391 ORTHO05D009446 3.6e-06 56.6 176 27.8
BolC3t17501H Brassica oleracea HOM05D000053 ORTHO05D000035 4.7e-06 56.2 116 30.2
AagrBONN_evm.TU.Sc2ySwM_228.5296 Anthoceros agrestis HOM05D010742 ORTHO05D014010 6.1e-06 55.8 94 37.2
RcHm_v2.0_Chr2g0135241 Rosa chinensis HOM05D007391 ORTHO05D009446 6.1e-06 55.8 51 49.0


User provided reference genes

Program Settings