Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p37230 Brassica napus HOM05D004018 ORTHO05D004408 1.8e-35 152.1 80 100.0
BcaC05g24546 Brassica carinata HOM05D004018 ORTHO05D004408 6.7e-27 123.6 91 76.9
BcaC05g24644 Brassica carinata HOM05D004018 ORTHO05D004408 8.2e-25 116.7 91 73.6
BraA10t42458Z Brassica rapa HOM05D004018 ORTHO05D004408 8.2e-25 116.7 92 72.8
Sp1g02290 Schrenkiella parvula HOM05D004018 ORTHO05D004408 8.2e-25 116.7 91 72.5
BolC2t09733H Brassica oleracea HOM05D004018 ORTHO05D004408 1.8e-24 115.5 59 98.3
CARHR002590 Cardamine hirsuta HOM05D004018 ORTHO05D004408 3.1e-24 114.8 91 71.4
Thhalv10007330m.g Eutrema salsugineum HOM05D004018 ORTHO05D004408 9.1e-24 113.2 91 70.3
BolC5t28960H Brassica oleracea HOM05D003188 ORTHO05D003602 2.0e-23 112.1 89 73.0
AL1G12800 Arabidopsis lyrata HOM05D004018 ORTHO05D004408 3.4e-23 111.3 91 68.1
C05p01820 Brassica napus HOM05D003188 ORTHO05D003602 3.4e-23 111.3 86 74.4
Carub.0001s0240 Capsella rubella HOM05D004018 ORTHO05D004408 3.4e-23 111.3 91 70.3
AT1G03290 Arabidopsis thaliana HOM05D004018 ORTHO05D004408 7.7e-23 110.2 91 67.0
A10p01840 Brassica napus HOM05D003188 ORTHO05D003602 1.3e-22 109.4 86 73.3
THA.LOC104801219 Tarenaya hassleriana HOM05D004018 ORTHO05D004408 1.3e-22 109.4 91 65.9
BcaC03g15959 Brassica carinata HOM05D004018 ORTHO05D004408 2.5e-21 105.1 67 80.6
AL6G50040 Arabidopsis lyrata HOM05D004018 ORTHO05D004408 5.5e-21 104.0 91 63.7
Ciclev10018884m.g Citrus clementina HOM05D004018 ORTHO05D004408 6.1e-20 100.5 91 58.2
COL.COLO4_09133 Corchorus olitorius HOM05D004018 ORTHO05D004408 6.1e-20 100.5 91 60.4
Carub.0006s3419 Capsella rubella HOM05D004018 ORTHO05D004408 7.9e-20 100.1 91 61.5
Gohir.D08G203601 Gossypium hirsutum HOM05D004018 ORTHO05D004408 1.0e-19 99.8 91 60.4
Gorai.004G215600 Gossypium raimondii HOM05D004018 ORTHO05D004408 1.0e-19 99.8 91 60.4
Aa31LG1G9250 Aethionema arabicum HOM05D004018 ORTHO05D004408 1.4e-19 99.4 91 60.4
CARHR251270 Cardamine hirsuta HOM05D004018 ORTHO05D004408 1.4e-19 99.4 91 61.5
BcaC03g16187 Brassica carinata HOM05D004018 ORTHO05D004408 2.3e-19 98.6 91 60.4
Sp6g02920 Schrenkiella parvula HOM05D004018 ORTHO05D004408 2.3e-19 98.6 91 60.4
A03p30760 Brassica napus HOM05D004018 ORTHO05D004408 3.9e-19 97.8 91 59.3
C02p39650 Brassica napus HOM05D004018 ORTHO05D004408 3.9e-19 97.8 91 59.3
C03p37460 Brassica napus HOM05D004018 ORTHO05D004408 3.9e-19 97.8 91 59.3
BolC2t09981H Brassica oleracea HOM05D004018 ORTHO05D004408 3.9e-19 97.8 91 59.3
BolC3t16038H Brassica oleracea HOM05D004018 ORTHO05D004408 3.9e-19 97.8 91 59.3
BraA03t12255Z Brassica rapa HOM05D004018 ORTHO05D004408 3.9e-19 97.8 91 59.3
Duzib138G0587 Durio zibethinus HOM05D004018 ORTHO05D004408 3.9e-19 97.8 91 58.2
Gohir.A08G185500 Gossypium hirsutum HOM05D004018 ORTHO05D004408 3.9e-19 97.8 91 59.3
GSVIVG01011103001 Vitis vinifera HOM05D004018 ORTHO05D004408 3.9e-19 97.8 91 58.2
AT4G02880 Arabidopsis thaliana HOM05D004018 ORTHO05D004408 5.1e-19 97.4 91 59.3
Lalb_Chr02g0142861 Lupinus albus HOM05D004018 ORTHO05D004408 1.5e-18 95.9 91 57.1
Oeu028079.1 Olea europaea HOM05D004018 ORTHO05D004408 1.5e-18 95.9 91 57.1
Thecc.01G282900 Theobroma cacao HOM05D004018 ORTHO05D004408 1.5e-18 95.9 91 57.1
arahy.Tifrunner.gnm1.ann1.6Q7DFN Arachis hypogaea HOM05D004018 ORTHO05D004408 2.0e-18 95.5 91 57.1
Manes.01G209500 Manihot esculenta HOM05D004018 ORTHO05D004408 2.6e-18 95.1 91 56.0
A02p25020 Brassica napus HOM05D004018 ORTHO05D004408 3.3e-18 94.7 91 57.1
BraA02t07491Z Brassica rapa HOM05D004018 ORTHO05D004408 3.3e-18 94.7 91 57.1
CSS0042185 Camellia sinensis var. sinensis HOM05D004018 ORTHO05D004408 3.3e-18 94.7 91 56.0
Gohir.D12G005400 Gossypium hirsutum HOM05D004018 ORTHO05D004408 3.3e-18 94.7 91 57.1
Gorai.008G005300 Gossypium raimondii HOM05D004018 ORTHO05D004408 3.3e-18 94.7 91 57.1
Rhsim13G0022700 Rhododendron simsii HOM05D000644 ORTHO05D004408 4.4e-18 94.4 92 54.3
TWI59G1189 Tripterygium wilfordii HOM05D004018 ORTHO05D004408 5.7e-18 94.0 91 56.0
FAN20G3038 Fragaria x ananassa HOM05D000644 ORTHO05D004408 7.4e-18 93.6 91 57.1
FAN27G0494 Fragaria x ananassa HOM05D000644 ORTHO05D004408 7.4e-18 93.6 91 57.1
Gohir.A12G005900 Gossypium hirsutum HOM05D004018 ORTHO05D004408 7.4e-18 93.6 91 57.1
TAR365G0909 Trochodendron aralioides HOM05D004018 ORTHO05D004408 7.4e-18 93.6 91 56.0
arahy.Tifrunner.gnm1.ann1.BX9H6P Arachis hypogaea HOM05D004018 ORTHO05D004408 9.7e-18 93.2 88 58.0
Cpa.g.sc837.2 Carica papaya HOM05D004018 ORTHO05D004408 9.7e-18 93.2 91 54.9
Hund28856 Selenicereus undatus HOM05D004018 ORTHO05D004408 9.7e-18 93.2 91 57.1
Hund28858 Selenicereus undatus HOM05D004018 ORTHO05D004408 9.7e-18 93.2 91 57.1
FvH4_2g23870 Fragaria vesca HOM05D004018 ORTHO05D004408 1.3e-17 92.8 91 56.0
FAN24G0467 Fragaria x ananassa HOM05D000644 ORTHO05D004408 1.3e-17 92.8 91 56.0
Duzib133G0055 Durio zibethinus HOM05D004018 ORTHO05D004408 1.7e-17 92.4 91 56.0
Prupe.8G244100 Prunus persica HOM05D004018 ORTHO05D004408 1.7e-17 92.4 91 53.8
RcHm_v2.0_Chr6g0291481 Rosa chinensis HOM05D004018 ORTHO05D004408 1.7e-17 92.4 91 56.0
Sc24g0004120 Simmondsia chinensis HOM05D004018 ORTHO05D004408 1.7e-17 92.4 91 56.0
TAR365G0933 Trochodendron aralioides HOM05D004018 ORTHO05D004408 1.7e-17 92.4 91 54.9
Atru.chr5.1370 Acer truncatum HOM05D004018 ORTHO05D004408 2.2e-17 92.0 91 56.0
Sabra02G0167700 Salix brachista HOM05D004018 ORTHO05D004408 2.2e-17 92.0 91 54.9
TWI14G0752 Tripterygium wilfordii HOM05D004018 ORTHO05D004408 2.2e-17 92.0 91 54.9
TAR362G1233 Trochodendron aralioides HOM05D004018 ORTHO05D004408 2.2e-17 92.0 91 52.7
CiPaw.07G093900 Carya illinoinensis HOM05D004018 ORTHO05D004408 2.8e-17 91.7 91 54.9
FAN15G3429 Fragaria x ananassa HOM05D000644 ORTHO05D004408 2.8e-17 91.7 91 56.0
MBI17_g12005_MAGBIO Magnolia biondii HOM05D004018 ORTHO05D004408 2.8e-17 91.7 93 50.5
vmacro02552 Vaccinium macrocarpon HOM05D004018 ORTHO05D004408 2.8e-17 91.7 91 53.8
Glyma.10G025000 Glycine max HOM05D004018 ORTHO05D004408 3.7e-17 91.3 91 54.9
Nn4g26185 Nelumbo nucifera HOM05D004018 ORTHO05D004408 3.7e-17 91.3 91 53.8
Ca_09771_v3 Cicer arietinum L. HOM05D004018 ORTHO05D004408 4.8e-17 90.9 91 54.9
Cc01_g19730 Coffea canephora HOM05D004018 ORTHO05D004408 4.8e-17 90.9 91 56.0
Haze_04739 Corylus avellana HOM05D004018 ORTHO05D004408 4.8e-17 90.9 91 53.8
Potri.014G139000 Populus trichocarpa HOM05D004018 ORTHO05D004408 4.8e-17 90.9 91 54.9
TAR636G0803 Trochodendron aralioides HOM05D004018 ORTHO05D004408 4.8e-17 90.9 91 53.8
Lj5g0010123 Lotus japonicus HOM05D004018 ORTHO05D004408 6.3e-17 90.5 91 54.9
PSO407G0422 Papaver somniferum HOM05D004018 ORTHO05D004408 6.3e-17 90.5 91 51.6
PSO170G1481 Papaver somniferum HOM05D004018 ORTHO05D004408 8.2e-17 90.1 91 51.6
SalBow4G1908 Salvia bowleyana HOM05D004018 ORTHO05D004408 8.2e-17 90.1 91 54.9
Actinidia00738 Actinidia chinensis HOM05D004018 ORTHO05D004408 1.1e-16 89.7 91 53.8
CANSAT25G1423 Cannabis sativa HOM05D004018 ORTHO05D004408 1.1e-16 89.7 91 53.8
Eucgr.H01516 Eucalyptus grandis HOM05D004018 ORTHO05D004408 1.1e-16 89.7 91 54.9
Lalb_Chr21g0306531 Lupinus albus HOM05D004018 ORTHO05D004408 1.1e-16 89.7 91 54.9
Cfa006111 Carpinus fangiana HOM05D004018 ORTHO05D004408 1.4e-16 89.4 91 52.7
Solyc09g064860.3 Solanum lycopersicum HOM05D004018 ORTHO05D004408 1.4e-16 89.4 91 53.8
Sopen09g026560 Solanum pennellii HOM05D004018 ORTHO05D004408 1.4e-16 89.4 91 53.8
TPR.G1562 Trifolium pratense HOM05D004018 ORTHO05D004408 1.4e-16 89.4 91 53.8
MD03G1268400 Malus domestica HOM05D004018 ORTHO05D004408 1.8e-16 89.0 92 53.3
Phvul.007G169800 Phaseolus vulgaris HOM05D004018 ORTHO05D004408 1.8e-16 89.0 91 53.8
MD11G1289200 Malus domestica HOM05D004018 ORTHO05D004408 2.4e-16 88.6 92 53.3
Actinidia09153 Actinidia chinensis HOM05D004018 ORTHO05D004408 3.1e-16 88.2 91 52.7
Hma1.2p1_0628F.1_g191955 Hydrangea macrophylla HOM05D004018 ORTHO05D004408 3.1e-16 88.2 91 52.7
Nitab4.5_0001028g0170 Nicotiana tabacum HOM05D004018 ORTHO05D004408 4.1e-16 87.8 91 53.8
Nitab4.5_0011633g0010 Nicotiana tabacum HOM05D004018 ORTHO05D004408 4.1e-16 87.8 91 53.8
Psat6g061120 Pisum sativum HOM05D004018 ORTHO05D004408 1.2e-15 86.3 91 53.8
MSTRG.12568 Avicennia marina HOM05D004018 ORTHO05D004408 1.6e-15 85.9 91 51.6
ATR0626G273 Amborella trichopoda HOM05D004018 ORTHO05D004408 2.0e-15 85.5 91 50.5
Glyma.02G148900 Glycine max HOM05D004018 ORTHO05D004408 2.0e-15 85.5 91 50.5
Medtr1g072560 Medicago truncatula HOM05D004018 ORTHO05D004408 2.0e-15 85.5 91 52.7
Lj2A1177T38 Lonicera japonica HOM05D004018 ORTHO05D004408 2.6e-15 85.1 91 53.8
QL12p022414 Quercus lobata HOM05D004018 ORTHO05D004408 2.6e-15 85.1 91 50.5
Migut.D00269 Erythranthe guttata HOM05D004018 ORTHO05D004408 3.5e-15 84.7 90 52.2
Migut.N02157 Erythranthe guttata HOM05D004018 ORTHO05D004408 3.5e-15 84.7 91 51.6
MSTRG.18219 Avicennia marina HOM05D004018 ORTHO05D004408 4.5e-15 84.3 91 53.8
Sabra14G0104800 Salix brachista HOM05D004018 ORTHO05D004408 4.5e-15 84.3 92 53.3
DCAR_002748 Daucus carota HOM05D004018 ORTHO05D004408 7.7e-15 83.6 90 51.1
CiPaw.08G103600 Carya illinoinensis HOM05D004018 ORTHO05D004408 1.0e-14 83.2 91 47.3
Dinv11250 Davidia involucrata HOM05D004018 ORTHO05D004408 1.7e-14 82.4 89 49.4
MD11G1124600 Malus domestica HOM05D004018 ORTHO05D004408 1.7e-14 82.4 62 66.1
DCAR_018413 Daucus carota HOM05D004018 ORTHO05D004408 2.2e-14 82.0 90 52.2
VMungo0720G2698 Vigna mungo HOM05D004018 ORTHO05D004408 2.2e-14 82.0 91 50.5
Eucgr.K03388 Eucalyptus grandis HOM05D004018 ORTHO05D004408 2.9e-14 81.6 89 50.6
HanXRQChr11g0327641 Helianthus annuus HOM05D004018 ORTHO05D004408 3.8e-14 81.3 91 54.9
Sed0026091 Sechium edule HOM05D004018 ORTHO05D004408 3.8e-14 81.3 91 50.5
TAR633G0135 Trochodendron aralioides HOM05D004018 ORTHO05D004408 5.0e-14 80.9 91 49.5
DCAR_012464 Daucus carota HOM05D000644 ORTHO05D000504 6.5e-14 80.5 90 50.0
Oeu047882.1 Olea europaea HOM05D004018 ORTHO05D004408 1.5e-13 79.3 92 48.9
Sed0023986 Sechium edule HOM05D004018 ORTHO05D004408 1.5e-13 79.3 91 49.5
CsaV3_7G028620 Cucumis sativus L. HOM05D004018 ORTHO05D004408 1.9e-13 79.0 91 51.6
SalBow6G7233 Salvia bowleyana HOM05D004018 ORTHO05D004408 1.9e-13 79.0 91 50.5
ClCG09G006910 Citrullus lanatus HOM05D004018 ORTHO05D004408 3.2e-13 78.2 91 50.5
MELO3C015856.2 Cucumis melo HOM05D004018 ORTHO05D004408 5.5e-13 77.4 91 49.5
ECA248G1820 Erigeron canadensis HOM05D004018 ORTHO05D004408 1.6e-12 75.9 91 50.5
SGA_v2.0_scaffold258G45767 Striga asiatica HOM05D004018 ORTHO05D004408 3.6e-12 74.7 91 46.2
HanXRQChr01g0002351 Helianthus annuus HOM05D004018 ORTHO05D004408 4.7e-12 74.3 91 49.5
Peaxi162Scf00570g00314 Petunia axillaris HOM05D004018 ORTHO05D004408 6.1e-12 73.9 123 40.7
Zm00001eb287880 Zea mays HOM05D004018 ORTHO05D004408 8.0e-12 73.6 91 44.0
HPP92_003154 Vanilla planifolia HOM05D004018 ORTHO05D004408 2.3e-11 72.0 91 46.2
PGR044G1283 Punica granatum HOM05D004018 ORTHO05D004408 4.0e-11 71.2 91 45.1
Aqoxy2G03257 Aquilegia oxysepala HOM05D004018 ORTHO05D004408 1.1e-10 69.7 91 49.5
Lsat_1_v5_gn_5_187400 Lactuca sativa HOM05D004018 ORTHO05D004408 2.0e-10 68.9 56 66.1
Thhalv10028568m.g Eutrema salsugineum HOM05D004018 ORTHO05D004408 4.4e-10 67.8 79 53.2
Os10g0315400 Oryza sativa ssp. japonica HOM05D004018 ORTHO05D004408 9.7e-10 66.6 91 42.9
Mapoly0005s0053 Marchantia polymorpha HOM05D004018 ORTHO05D004408 1.7e-09 65.9 61 50.8
SGA_v2.0_scaffold11G05799 Striga asiatica HOM05D004018 ORTHO05D004408 1.7e-09 65.9 77 46.8
AUR62033708 Chenopodium quinoa HOM05D004018 ORTHO05D004408 8.2e-09 63.5 43 67.4
AUR62036814 Chenopodium quinoa HOM05D004018 ORTHO05D004408 8.2e-09 63.5 43 67.4
EL10Ac7g17209 Beta vulgaris HOM05D004018 ORTHO05D004408 1.4e-08 62.8 42 69.0
ECA236G2305 Erigeron canadensis HOM05D004018 ORTHO05D004408 1.4e-08 62.8 93 40.9
Pp3c15_12690 Physcomitrium patens HOM05D004018 ORTHO05D004408 1.4e-08 62.8 61 47.5
CARHR005950 Cardamine hirsuta HOM05D004018 ORTHO05D004408 2.7e-07 58.5 37 75.7
Atru.chr12.487 Acer truncatum HOM05D004018 ORTHO05D004408 3.5e-07 58.2 40 70.0
CDE05G3031 Ceratophyllum demersum HOM05D004018 ORTHO05D004408 4.5e-07 57.8 91 41.8
Atru.chr12.465 Acer truncatum HOM05D004018 ORTHO05D004408 1.3e-06 56.2 40 67.5
Zm00001eb349530 Zea mays HOM05D004018 ORTHO05D004408 1.7e-06 55.8 97 37.1
ECA236G3018 Erigeron canadensis HOM05D004018 ORTHO05D004408 6.5e-06 53.9 91 36.3


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