Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 3.1e-95 351.7 165 100.0
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 7.0e-95 350.5 165 99.4
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 7.0e-95 350.5 165 99.4
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 5.9e-94 347.4 165 98.8
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 5.9e-94 347.4 165 98.8
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 2.2e-93 345.5 165 97.6
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 5.5e-92 340.9 165 95.8
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 6.7e-90 334.0 165 92.7
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 4.8e-88 327.8 165 90.9
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 1.1e-87 326.6 165 92.7
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 1.4e-87 326.2 165 91.5
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 4.5e-86 321.2 165 91.5
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 1.5e-84 316.2 164 86.6
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 1.6e-83 312.8 165 86.1
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 2.4e-79 298.9 165 80.0
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 9.1e-79 297.0 165 81.2
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 2.0e-78 295.8 165 78.8
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 1.7e-77 292.7 165 78.8
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 2.2e-77 292.4 163 79.8
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 2.9e-77 292.0 165 79.4
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 3.8e-77 291.6 163 77.9
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 5.0e-77 291.2 165 79.4
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 5.0e-77 291.2 165 78.2
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 6.5e-77 290.8 165 79.4
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 8.5e-77 290.4 165 77.6
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 8.5e-77 290.4 166 80.7
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 1.1e-76 290.0 165 79.4
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 1.5e-76 289.7 162 78.4
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 1.5e-76 289.7 165 77.6
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 1.5e-76 289.7 166 78.3
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 1.9e-76 289.3 161 78.3
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 2.5e-76 288.9 165 86.1
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 5.5e-76 287.7 165 78.2
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 5.5e-76 287.7 165 78.2
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 7.2e-76 287.3 166 78.3
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 1.2e-75 286.6 165 75.8
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 1.2e-75 286.6 165 78.2
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 1.2e-75 286.6 163 79.1
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 2.1e-75 285.8 165 76.4
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 2.7e-75 285.4 165 78.2
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 4.7e-75 284.6 165 78.2
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 4.7e-75 284.6 165 78.2
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 6.1e-75 284.3 165 77.6
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 6.1e-75 284.3 165 74.5
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 6.1e-75 284.3 165 75.2
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 2.3e-74 282.3 165 76.4
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 3.0e-74 282.0 165 77.6
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 4.0e-74 281.6 165 74.5
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 8.8e-74 280.4 165 73.9
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 8.8e-74 280.4 165 76.4
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 1.2e-73 280.0 163 76.1
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 1.2e-73 280.0 163 75.5
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 1.5e-73 279.6 166 74.7
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 2.0e-73 279.3 165 76.4
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 2.0e-73 279.3 165 77.0
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 2.0e-73 279.3 165 75.8
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 2.6e-73 278.9 165 74.5
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 3.4e-73 278.5 165 75.2
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 5.7e-73 277.7 165 76.4
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 7.5e-73 277.3 165 74.5
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 1.3e-72 276.6 163 76.1
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 1.3e-72 276.6 165 76.4
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 2.2e-72 275.8 165 74.5
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 4.9e-72 274.6 163 76.1
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 1.1e-71 273.5 165 75.2
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 1.1e-71 273.5 165 73.3
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.4e-71 273.1 164 75.6
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 1.8e-71 272.7 165 74.5
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 2.4e-71 272.3 166 75.9
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 3.5e-70 268.5 165 72.1
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 3.5e-70 268.5 163 73.0
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 5.9e-70 267.7 164 72.0
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 7.7e-70 267.3 165 73.9
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 1.7e-69 266.2 165 73.3
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 1.5e-68 263.1 163 72.4
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 5.6e-68 261.2 165 72.7
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 6.1e-67 257.7 157 75.2
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 1.8e-66 256.1 164 73.8
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 1.2e-65 253.4 144 77.1
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 2.6e-65 252.3 162 68.5
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 1.3e-64 250.0 161 72.0
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 3.5e-62 241.9 262 49.6
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 3.9e-61 238.4 202 56.9
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 9.8e-57 223.8 126 79.4
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 1.7e-53 213.0 117 82.1
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 3.9e-53 211.8 140 68.6
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 2.5e-52 209.1 157 59.9
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 3.3e-52 208.8 159 61.6
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 4.3e-52 208.4 167 59.9
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 6.2e-51 204.5 109 85.3
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 3.1e-50 202.2 159 57.2
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 2.0e-49 199.5 164 57.3
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 1.7e-37 159.8 84 85.7
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 7.3e-36 154.5 82 82.9
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 3.1e-34 149.1 83 79.5
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 2.6e-33 146.0 91 69.2
Cpa.g.sc10.78 Carica papaya HOM05D007259 ORTHO05D009158 1.7e-32 143.3 82 73.2
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 3.8e-32 142.1 87 73.6
FAN02G2583 Fragaria x ananassa HOM05D007259 ORTHO05D009158 8.4e-32 141.0 82 74.4
MD17G1223600 Malus domestica HOM05D007259 ORTHO05D009158 1.1e-31 140.6 83 73.5
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 1.6e-30 136.7 91 63.7
Lj5C80T7 Lonicera japonica HOM05D007259 ORTHO05D009158 1.3e-27 127.1 82 67.1
MELO3C026739.2 Cucumis melo HOM05D007259 ORTHO05D009158 4.8e-27 125.2 82 67.1
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 1.1e-26 124.0 94 62.8
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 8.4e-16 87.8 54 74.1
COL.COLO4_26703 Corchorus olitorius HOM05D007259 ORTHO05D009158 9.6e-12 74.3 43 76.7


User provided reference genes

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