Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p36410 Brassica napus HOM05D005278 ORTHO05D006500 4.0e-42 174.5 96 100.0
BolC9t57995H Brassica oleracea HOM05D005278 ORTHO05D006500 2.9e-32 141.7 123 71.5
C09p51370 Brassica napus HOM05D005278 ORTHO05D006500 1.9e-31 139.0 123 70.7
A10p16320 Brassica napus HOM05D005278 ORTHO05D006500 1.6e-30 136.0 123 69.9
BraA10t43715Z Brassica rapa HOM05D005278 ORTHO05D006500 1.6e-30 136.0 123 69.9
BcaC04g19820 Brassica carinata HOM05D005278 ORTHO05D006500 2.7e-30 135.2 123 69.1
BcaB08g36287 Brassica carinata HOM05D005278 ORTHO05D006500 6.0e-30 134.0 123 69.1
Thhalv10013620m.g Eutrema salsugineum HOM05D005278 ORTHO05D006500 1.1e-28 129.8 94 80.9
Sp6g20780 Schrenkiella parvula HOM05D005278 ORTHO05D006500 1.9e-28 129.0 94 80.9
AL8G35480 Arabidopsis lyrata HOM05D005278 ORTHO05D006500 4.9e-24 114.4 101 71.3
AL48U10090 Arabidopsis lyrata HOM05D005278 ORTHO05D006500 8.3e-24 113.6 111 66.7
Carub.0008s1974 Capsella rubella HOM05D005278 ORTHO05D006500 1.9e-23 112.5 111 67.6
AT5G59210 Arabidopsis thaliana HOM05D005278 ORTHO05D006500 5.4e-23 110.9 101 69.3
CARHR285340 Cardamine hirsuta HOM05D005278 ORTHO05D006500 5.4e-23 110.9 130 60.0
Aa31LG4G15720 Aethionema arabicum HOM05D005278 ORTHO05D006500 1.2e-22 109.8 99 69.7
BolC2t07376H Brassica oleracea HOM05D005278 ORTHO05D006500 2.1e-22 109.0 76 81.6
C02p12810 Brassica napus HOM05D005278 ORTHO05D006500 2.3e-21 105.5 83 77.1
BcaC06g34357 Brassica carinata HOM05D005278 ORTHO05D016744 5.1e-21 104.4 58 94.8
Gohir.D03G121500 Gossypium hirsutum HOM05D005278 ORTHO05D006500 5.1e-21 104.4 101 64.4
THA.LOC104814887 Tarenaya hassleriana HOM05D005278 ORTHO05D006500 6.6e-21 104.0 101 65.3
Lalb_Chr14g0372041 Lupinus albus HOM05D005278 ORTHO05D006500 8.6e-21 103.6 107 61.7
Gohir.A03G045500 Gossypium hirsutum HOM05D005278 ORTHO05D006500 1.1e-20 103.2 101 63.4
Lj3g0005158 Lotus japonicus HOM05D005278 ORTHO05D006500 1.1e-20 103.2 107 62.6
Manes.02G127600 Manihot esculenta HOM05D005278 ORTHO05D006500 1.1e-20 103.2 112 58.9
Gorai.003G128600 Gossypium raimondii HOM05D005278 ORTHO05D006500 1.5e-20 102.8 101 63.4
Thecc.09G313600 Theobroma cacao HOM05D005278 ORTHO05D006500 2.5e-20 102.1 101 61.4
Ciclev10028430m.g Citrus clementina HOM05D005278 ORTHO05D006500 3.3e-20 101.7 101 62.4
Lalb_Chr24g0397151 Lupinus albus HOM05D005278 ORTHO05D006500 3.3e-20 101.7 107 59.8
Prupe.6G068200 Prunus persica HOM05D005278 ORTHO05D006500 5.6e-20 100.9 107 59.8
CANSAT54G0396 Cannabis sativa HOM05D005278 ORTHO05D006500 7.3e-20 100.5 107 60.7
FAN16G0192 Fragaria x ananassa HOM05D005278 ORTHO05D006500 9.5e-20 100.1 107 59.8
FAN17G1485 Fragaria x ananassa HOM05D005278 ORTHO05D006500 9.5e-20 100.1 107 59.8
FAN21G0275 Fragaria x ananassa HOM05D005278 ORTHO05D006500 9.5e-20 100.1 107 59.8
FAN28G2746 Fragaria x ananassa HOM05D005278 ORTHO05D006500 9.5e-20 100.1 107 59.8
arahy.Tifrunner.gnm1.ann1.4JU9WJ Arachis hypogaea HOM05D005278 ORTHO05D006500 1.2e-19 99.8 107 59.8
arahy.Tifrunner.gnm1.ann1.NY9X43 Arachis hypogaea HOM05D005278 ORTHO05D006500 1.2e-19 99.8 107 59.8
QL01p028069 Quercus lobata HOM05D005278 ORTHO05D006500 1.2e-19 99.8 110 57.3
Ca_01301_v3 Cicer arietinum L. HOM05D005278 ORTHO05D006500 1.6e-19 99.4 106 60.4
TPR.G6835 Trifolium pratense HOM05D005278 ORTHO05D006500 1.6e-19 99.4 108 59.3
Cfa011575 Carpinus fangiana HOM05D005278 ORTHO05D006500 2.1e-19 99.0 100 63.0
Haze_24189 Corylus avellana HOM05D005278 ORTHO05D006500 2.1e-19 99.0 100 63.0
CSS0023124 Camellia sinensis var. sinensis HOM05D005278 ORTHO05D006500 2.8e-19 98.6 107 57.9
Sed0022829 Sechium edule HOM05D005278 ORTHO05D006500 2.8e-19 98.6 107 58.9
CiPaw.14G064400 Carya illinoinensis HOM05D005278 ORTHO05D006500 3.6e-19 98.2 105 59.0
FAN11G2960 Fragaria x ananassa HOM05D005278 ORTHO05D006500 3.6e-19 98.2 107 58.9
Ah.08g220210 Amaranthus hybridus HOM05D005278 ORTHO05D006500 4.7e-19 97.8 111 57.7
Phvul.L008343 Phaseolus vulgaris HOM05D005278 ORTHO05D006500 4.7e-19 97.8 109 58.7
TWI79G1569 Tripterygium wilfordii HOM05D005278 ORTHO05D006500 4.7e-19 97.8 111 57.7
ClCG02G019860 Citrullus lanatus HOM05D005278 ORTHO05D006500 8.1e-19 97.1 107 57.0
Dinv17056 Davidia involucrata HOM05D005278 ORTHO05D006500 8.1e-19 97.1 107 57.0
Dinv43000 Davidia involucrata HOM05D005278 ORTHO05D006500 8.1e-19 97.1 107 57.0
Dinv43097 Davidia involucrata HOM05D005278 ORTHO05D006500 8.1e-19 97.1 107 57.0
FvH4_3g37100 Fragaria vesca HOM05D005278 ORTHO05D006500 8.1e-19 97.1 107 57.9
Medtr2g097780 Medicago truncatula HOM05D005278 ORTHO05D006500 1.1e-18 96.7 108 58.3
vmacro03023 Vaccinium macrocarpon HOM05D005278 ORTHO05D006500 1.1e-18 96.7 107 56.1
VMungo1080G1008 Vigna mungo HOM05D005278 ORTHO05D006500 1.1e-18 96.7 109 58.7
BcaC03g14039 Brassica carinata HOM05D005278 ORTHO05D006500 1.4e-18 96.3 76 75.0
EL10Ac7g16079 Beta vulgaris HOM05D005278 ORTHO05D006500 1.8e-18 95.9 110 56.4
MD11G1092400 Malus domestica HOM05D005278 ORTHO05D006500 2.3e-18 95.5 107 57.0
CsaV3_6G016570 Cucumis sativus L. HOM05D005278 ORTHO05D006500 3.1e-18 95.1 107 56.1
CsaV3_7G010040 Cucumis sativus L. HOM05D005278 ORTHO05D006500 3.1e-18 95.1 107 56.1
Lj1A145T60 Lonicera japonica HOM05D005278 ORTHO05D006500 3.1e-18 95.1 107 56.1
RcHm_v2.0_Chr5g0066731 Rosa chinensis HOM05D005278 ORTHO05D006500 3.1e-18 95.1 107 57.9
Glyma.15G035200 Glycine max HOM05D005278 ORTHO05D006500 4.0e-18 94.7 113 57.5
Potri.001G245500 Populus trichocarpa HOM05D005278 ORTHO05D006500 5.2e-18 94.4 111 58.6
Nitab4.5_0000507g0040 Nicotiana tabacum HOM05D005278 ORTHO05D006500 6.8e-18 94.0 107 56.1
Atru.chr3.4014 Acer truncatum HOM05D005278 ORTHO05D006500 8.9e-18 93.6 101 57.4
Aqoxy1G00819 Aquilegia oxysepala HOM05D005278 ORTHO05D006500 8.9e-18 93.6 108 55.6
Glyma.13G339200 Glycine max HOM05D005278 ORTHO05D006500 8.9e-18 93.6 113 56.6
Lsat_1_v5_gn_5_169740 Lactuca sativa HOM05D005278 ORTHO05D006500 8.9e-18 93.6 104 54.8
Actinidia08546 Actinidia chinensis HOM05D005278 ORTHO05D006500 1.2e-17 93.2 107 54.2
Cpa.g.sc81.65 Carica papaya HOM05D005278 ORTHO05D006500 1.2e-17 93.2 115 56.5
AUR62020048 Chenopodium quinoa HOM05D005278 ORTHO05D006500 1.2e-17 93.2 111 55.9
MELO3C025886.2 Cucumis melo HOM05D005278 ORTHO05D006500 1.2e-17 93.2 107 55.1
GSVIVG01024871001 Vitis vinifera HOM05D005278 ORTHO05D006500 1.5e-17 92.8 107 57.0
Hma1.2p1_0274F.1_g110490 Hydrangea macrophylla HOM05D005278 ORTHO05D006500 2.0e-17 92.4 109 53.2
Hma1.2p1_0274F.1_g110500 Hydrangea macrophylla HOM05D005278 ORTHO05D006500 2.0e-17 92.4 109 53.2
Peaxi162Scf00676g00221 Petunia axillaris HOM05D005278 ORTHO05D006500 2.0e-17 92.4 107 55.1
PGR102G1735 Punica granatum HOM05D005278 ORTHO05D006500 2.0e-17 92.4 107 56.1
Hund18883 Selenicereus undatus HOM05D005278 ORTHO05D006500 2.0e-17 92.4 111 55.0
TAR369G1109 Trochodendron aralioides HOM05D005278 ORTHO05D006500 2.0e-17 92.4 107 57.0
Aa31LG1G11980 Aethionema arabicum HOM05D005278 ORTHO05D006500 3.4e-17 91.7 107 57.9
MSTRG.12654 Avicennia marina HOM05D005278 ORTHO05D006500 4.4e-17 91.3 107 53.3
CAN.G173.8 Capsicum annuum HOM05D005278 ORTHO05D006500 4.4e-17 91.3 107 53.3
MBI05_g02648_MAGBIO Magnolia biondii HOM05D005278 ORTHO05D006500 7.6e-17 90.5 107 52.3
Manes.01G168300 Manihot esculenta HOM05D005278 ORTHO05D006500 7.6e-17 90.5 102 56.9
AUR62001727 Chenopodium quinoa HOM05D005278 ORTHO05D006500 9.9e-17 90.1 107 56.1
Eucgr.B02303 Eucalyptus grandis HOM05D005278 ORTHO05D006500 9.9e-17 90.1 107 56.1
Psat5g287560 Pisum sativum HOM05D005278 ORTHO05D006500 9.9e-17 90.1 125 50.4
Migut.N00899 Erythranthe guttata HOM05D005278 ORTHO05D006500 1.3e-16 89.7 107 54.2
ECA248G1020 Erigeron canadensis HOM05D005278 ORTHO05D006500 2.2e-16 89.0 107 54.2
Nitab4.5_0006512g0020 Nicotiana tabacum HOM05D005278 ORTHO05D006500 2.2e-16 89.0 107 54.2
Cc01_g13430 Coffea canephora HOM05D005278 ORTHO05D006500 2.9e-16 88.6 111 51.4
HanXRQChr01g0010681 Helianthus annuus HOM05D005278 ORTHO05D006500 4.9e-16 87.8 107 53.3
Sopen09g019050 Solanum pennellii HOM05D005278 ORTHO05D006500 6.4e-16 87.4 107 52.3
BcaB05g22478 Brassica carinata HOM05D005278 ORTHO05D006500 8.3e-16 87.0 75 70.7
Nn2g13505 Nelumbo nucifera HOM05D005278 ORTHO05D006500 1.1e-15 86.7 107 52.3
PSO384G3155 Papaver somniferum HOM05D005278 ORTHO05D006500 1.4e-15 86.3 114 53.5
Sabra16G0148900 Salix brachista HOM05D005278 ORTHO05D006500 1.4e-15 86.3 111 51.4
Lsat_1_v5_gn_9_24160 Lactuca sativa HOM05D005278 ORTHO05D006500 1.9e-15 85.9 108 52.8
Oeu004184.2 Olea europaea HOM05D005278 ORTHO05D006500 2.4e-15 85.5 107 51.4
COL.COLO4_18589 Corchorus olitorius HOM05D005278 ORTHO05D006500 4.1e-15 84.7 90 60.0
PSO339G3476 Papaver somniferum HOM05D005278 ORTHO05D006500 7.1e-15 84.0 114 51.8
HPP92_018172 Vanilla planifolia HOM05D001260 ORTHO05D002424 2.1e-14 82.4 112 47.3
unitig_52.g16817 Utricularia gibba HOM05D005278 ORTHO05D006500 3.5e-14 81.6 107 52.3
Rhsim13G0076600 Rhododendron simsii HOM05D005278 ORTHO05D006500 7.8e-14 80.5 96 54.2
DCAR_007424 Daucus carota HOM05D005278 ORTHO05D006500 1.0e-13 80.1 100 51.0
Os03g0268100 Oryza sativa ssp. japonica HOM05D005278 ORTHO05D006500 1.7e-13 79.3 112 46.4
ATR0559G139 Amborella trichopoda HOM05D005278 ORTHO05D006500 2.3e-13 79.0 113 46.0
Zm00001eb397870 Zea mays HOM05D005278 ORTHO05D006500 5.1e-13 77.8 100 47.0
CDE07G0843 Ceratophyllum demersum HOM05D005278 ORTHO05D006500 6.6e-13 77.4 103 49.5
SEGI_23562 Sequoiadendron giganteum HOM05D005278 ORTHO05D006500 8.6e-13 77.0 107 44.9
FAN27G2862 Fragaria x ananassa HOM05D005278 ORTHO05D006500 9.6e-12 73.6 96 54.2
Zm00001eb011990 Zea mays HOM05D005278 ORTHO05D006500 3.6e-11 71.6 132 42.4
CDE04G2524 Ceratophyllum demersum HOM05D005278 ORTHO05D006500 6.2e-11 70.9 103 47.6
MD03G1084900 Malus domestica HOM05D005278 ORTHO05D006500 6.2e-11 70.9 102 49.0
FvH4_2g37740 Fragaria vesca HOM05D005278 ORTHO05D006500 1.1e-10 70.1 85 55.3
SHI05905 Sapria himalayana HOM05D005278 ORTHO05D006500 4.0e-10 68.2 103 46.6
Pp3c1_10500 Physcomitrium patens HOM05D005278 ORTHO05D006500 3.8e-08 61.6 114 37.7
HPP92_018158 Vanilla planifolia HOM05D005278 ORTHO05D006500 1.4e-07 59.7 90 44.4
Mapoly0044s0102 Marchantia polymorpha HOM05D005278 ORTHO05D006500 7.1e-07 57.4 89 42.7
RcHm_v2.0_Chr5g0066581 Rosa chinensis HOM05D005278 ORTHO05D006500 4.6e-06 54.7 55 60.0


User provided reference genes

Program Settings