Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p36240 Brassica napus HOM05D011693 ORTHO05D017562 4.4e-85 317.8 146 100.0
BolC2t09637H Brassica oleracea HOM05D011693 ORTHO05D017562 4.4e-85 317.8 146 100.0
A02p22580 Brassica napus HOM05D011693 ORTHO05D017562 6.2e-79 297.4 146 93.2
BraA02t07262Z Brassica rapa HOM05D011693 ORTHO05D017562 6.2e-79 297.4 146 93.2
BolC2t09634H Brassica oleracea HOM05D011693 ORTHO05D017562 1.2e-66 256.5 143 80.4
C02p36200 Brassica napus HOM05D011693 ORTHO05D017562 1.9e-64 249.2 143 79.0
A02p22560 Brassica napus HOM05D011693 ORTHO05D017562 3.3e-64 248.4 143 78.3
BraA02t07261Z Brassica rapa HOM05D011693 ORTHO05D017562 3.3e-64 248.4 143 78.3
BcaB05g25174 Brassica carinata HOM05D011693 ORTHO05D017562 2.1e-47 192.6 146 65.8
BcaB05g25172 Brassica carinata HOM05D011693 ORTHO05D023959 2.9e-28 129.0 140 46.4
A02p22610 Brassica napus HOM05D011693 ORTHO05D023959 2.7e-26 122.5 150 44.0
A02p22640 Brassica napus HOM05D011693 ORTHO05D040107 2.0e-24 116.3 148 43.9
BolC6t38173H Brassica oleracea HOM05D004904 ORTHO05D012610 2.6e-16 89.4 149 34.2
CARHR220080 Cardamine hirsuta HOM05D004904 ORTHO05D012458 3.3e-16 89.0 142 33.1
BraA07t30372Z Brassica rapa HOM05D004904 ORTHO05D012610 1.3e-15 87.0 150 33.3
C06p30060 Brassica napus HOM05D004904 ORTHO05D012610 2.8e-15 85.9 150 34.0
BolC6t38167H Brassica oleracea HOM05D004904 ORTHO05D012610 2.8e-15 85.9 150 34.0
CARHR102040 Cardamine hirsuta HOM05D004904 ORTHO05D012610 3.7e-15 85.5 147 30.6
CARHR102030 Cardamine hirsuta HOM05D004904 ORTHO05D012610 6.3e-15 84.7 152 33.6
A07p27280 Brassica napus HOM05D004904 ORTHO05D012610 1.1e-14 84.0 150 34.0
BraA07t30371Z Brassica rapa HOM05D004904 ORTHO05D012610 1.1e-14 84.0 150 34.0
AL1G57680 Arabidopsis lyrata HOM05D004904 ORTHO05D012458 3.1e-14 82.4 145 34.5
A02p42370 Brassica napus HOM05D004904 ORTHO05D010762 2.6e-13 79.3 142 32.4
BraA02t09168Z Brassica rapa HOM05D004904 ORTHO05D010762 2.6e-13 79.3 142 32.4
BolC2t12283H Brassica oleracea HOM05D004904 ORTHO05D010762 3.5e-13 79.0 142 31.7
Carub.0007s2940 Capsella rubella HOM05D004904 ORTHO05D010762 4.5e-13 78.6 143 30.8
Thhalv10005414m.g Eutrema salsugineum HOM05D004904 ORTHO05D010762 4.5e-13 78.6 142 32.4
AT1G51240 Arabidopsis thaliana HOM05D004904 ORTHO05D012458 3.8e-12 75.5 154 30.5
Carub.0001s4015 Capsella rubella HOM05D004904 ORTHO05D012458 3.8e-12 75.5 154 30.5
AL3G21820 Arabidopsis lyrata HOM05D004904 ORTHO05D021430 1.9e-11 73.2 143 29.4
BraA04t16123Z Brassica rapa HOM05D004904 ORTHO05D012458 2.5e-11 72.8 145 31.0
C07p62040 Brassica napus HOM05D004904 ORTHO05D012458 3.2e-11 72.4 145 31.7
C08p44310 Brassica napus HOM05D004904 ORTHO05D012458 3.2e-11 72.4 146 30.1
BolC8t51974H Brassica oleracea HOM05D004904 ORTHO05D012458 3.2e-11 72.4 146 30.1
BolC4t25152H Brassica oleracea HOM05D004904 ORTHO05D012458 4.2e-11 72.0 145 31.0
Carub.0007s2936 Capsella rubella HOM05D004904 ORTHO05D010762 7.2e-11 71.2 146 30.1
C06p30120 Brassica napus HOM05D004904 ORTHO05D012610 9.4e-11 70.9 137 29.9
Carub.0007s2938 Capsella rubella HOM05D004904 ORTHO05D010762 9.4e-11 70.9 148 31.1
AT2G04115 Arabidopsis thaliana HOM05D004904 ORTHO05D012610 2.1e-10 69.7 145 30.3
C08p44250 Brassica napus HOM05D004904 ORTHO05D012458 2.1e-10 69.7 145 30.3
BolC2t09638H Brassica oleracea HOM05D011693 ORTHO05D023959 2.1e-10 69.7 84 40.5
BraA09t41446Z Brassica rapa HOM05D004904 ORTHO05D012458 2.1e-10 69.7 145 29.7
Thhalv10002725m.g Eutrema salsugineum HOM05D004904 ORTHO05D010762 2.1e-10 69.7 144 27.8
AT3G10455 Arabidopsis thaliana HOM05D004904 ORTHO05D021430 2.7e-10 69.3 130 30.8
A07p27310 Brassica napus HOM05D004904 ORTHO05D012610 3.6e-10 68.9 138 29.0
C02p36250 Brassica napus HOM05D011693 ORTHO05D023959 4.7e-10 68.6 84 39.3
C07p62020 Brassica napus HOM05D004904 ORTHO05D012458 4.7e-10 68.6 144 31.2
Carub.0002s1683 Capsella rubella HOM05D004904 ORTHO05D012993 4.7e-10 68.6 144 28.5
CARHR112870 Cardamine hirsuta HOM05D004904 ORTHO05D010762 6.1e-10 68.2 142 28.2
Carub.0007s2927 Capsella rubella HOM05D004904 ORTHO05D010762 8.0e-10 67.8 143 30.1
BcaC07g41901 Brassica carinata HOM05D004904 ORTHO05D015396 1.0e-09 67.4 155 27.7
BcaC07g41902 Brassica carinata HOM05D004904 ORTHO05D015396 1.0e-09 67.4 155 27.7
Thhalv10026508m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 1.0e-09 67.4 150 28.0
C08p49560 Brassica napus HOM05D004904 ORTHO05D015396 1.8e-09 66.6 155 27.7
BolC8t52492H Brassica oleracea HOM05D004904 ORTHO05D015396 1.8e-09 66.6 155 27.7
Carub.0002s0376 Capsella rubella HOM05D004904 ORTHO05D015396 2.3e-09 66.2 152 29.6
AL2G29420 Arabidopsis lyrata HOM05D004904 ORTHO05D012993 4.0e-09 65.5 160 30.0
BraA02t07264Z Brassica rapa HOM05D011693 ORTHO05D023959 4.0e-09 65.5 85 41.2
BraA09t41901Z Brassica rapa HOM05D004904 ORTHO05D015396 8.8e-09 64.3 156 27.6
Thhalv10002784m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 1.2e-08 63.9 148 27.7
BcaC08g44379 Brassica carinata HOM05D003012 ORTHO05D002833 1.5e-08 63.5 134 29.1
BcaC08g45375 Brassica carinata HOM05D004904 ORTHO05D012610 1.5e-08 63.5 116 31.0
C06p18130 Brassica napus HOM05D003012 ORTHO05D002833 1.5e-08 63.5 134 29.1
BolC6t37021H Brassica oleracea HOM05D003012 ORTHO05D002833 1.5e-08 63.5 134 29.1
BraA07t29670Z Brassica rapa HOM05D003012 ORTHO05D002833 1.5e-08 63.5 134 29.1
A07p19700 Brassica napus HOM05D003012 ORTHO05D002833 2.0e-08 63.2 134 29.9
Carub.0003s2589 Capsella rubella HOM05D004904 ORTHO05D012610 2.0e-08 63.2 146 29.5
AT1G09245 Arabidopsis thaliana HOM05D004904 ORTHO05D015396 9.7e-08 60.8 146 27.4
C07p61990 Brassica napus HOM05D004904 ORTHO05D027820 1.3e-07 60.5 148 28.4
C07p62000 Brassica napus HOM05D004904 ORTHO05D027820 1.3e-07 60.5 148 28.4
BolC7t46619H Brassica oleracea HOM05D004904 ORTHO05D027820 1.3e-07 60.5 148 28.4
AL4G12990 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 1.7e-07 60.1 136 28.7
Thhalv10029524m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 1.7e-07 60.1 152 26.3
BolC2t09640H Brassica oleracea HOM05D011693 ORTHO05D040107 2.8e-07 59.3 73 42.5
Thhalv10000458m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 4.8e-07 58.5 148 27.7
Thhalv10023047m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 6.3e-07 58.2 145 25.5
AT5G38440 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 1.4e-06 57.0 138 27.5
Thhalv10023818m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 1.8e-06 56.6 112 29.5
C07p62010 Brassica napus HOM05D004904 ORTHO05D027820 2.4e-06 56.2 135 27.4
A03p01280 Brassica napus HOM05D003012 ORTHO05D002833 3.1e-06 55.8 136 25.7
BraA03t09509Z Brassica rapa HOM05D003012 ORTHO05D002833 3.1e-06 55.8 136 25.7
Thhalv10028054m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 3.1e-06 55.8 136 27.9


User provided reference genes

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