Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p35980 Brassica napus HOM05D001474 ORTHO05D014899 1.4e-14 81.6 37 100.0
BolC2t09609H Brassica oleracea HOM05D001474 ORTHO05D014899 2.4e-11 70.9 33 90.9
BcaNung02515 Brassica carinata HOM05D001474 ORTHO05D001461 6.1e-07 56.2 33 72.7
A08p22530 Brassica napus HOM05D001349 ORTHO05D008727 6.1e-07 56.2 33 69.7
C01p02040 Brassica napus HOM05D001474 ORTHO05D001461 6.1e-07 56.2 33 72.7
BolC1t00196H Brassica oleracea HOM05D001474 ORTHO05D001461 6.1e-07 56.2 33 72.7
BraA08t34209Z Brassica rapa HOM05D001349 ORTHO05D008727 6.1e-07 56.2 33 69.7
Carub.0007s0324 Capsella rubella HOM05D001474 ORTHO05D001461 6.1e-07 56.2 33 72.7
Thhalv10025605m.g Eutrema salsugineum HOM05D001474 ORTHO05D001461 6.1e-07 56.2 33 72.7
Sp7g34720 Schrenkiella parvula HOM05D001474 ORTHO05D001461 6.1e-07 56.2 33 72.7
arahy.Tifrunner.gnm1.ann1.V1Y6DD Arachis hypogaea HOM05D001474 ORTHO05D001461 7.9e-07 55.8 33 63.6
BcaNung02516 Brassica carinata HOM05D001474 ORTHO05D001461 7.9e-07 55.8 33 69.7
A01p01880 Brassica napus HOM05D001474 ORTHO05D001461 7.9e-07 55.8 33 69.7
BraA01t00177Z Brassica rapa HOM05D001474 ORTHO05D001461 7.9e-07 55.8 33 69.7
ClCG02G012750 Citrullus lanatus HOM05D001474 ORTHO05D001461 1.0e-06 55.5 33 69.7
VMungo1215G1078 Vigna mungo HOM05D001474 ORTHO05D001461 1.4e-06 55.1 33 69.7
FvH4_1g15810 Fragaria vesca HOM05D001474 ORTHO05D001461 1.8e-06 54.7 33 69.7
FAN26G1764 Fragaria x ananassa HOM05D001474 ORTHO05D001461 1.8e-06 54.7 33 69.7
FAN28G2537 Fragaria x ananassa HOM05D001474 ORTHO05D001461 1.8e-06 54.7 33 69.7
PSO170G2326 Papaver somniferum HOM05D001474 ORTHO05D001461 1.8e-06 54.7 33 69.7
PSO210G3822 Papaver somniferum HOM05D001474 ORTHO05D001461 1.8e-06 54.7 33 69.7
Phvul.002G019600 Phaseolus vulgaris HOM05D001474 ORTHO05D001461 1.8e-06 54.7 33 66.7
Potri.005G137400 Populus trichocarpa HOM05D001474 ORTHO05D001461 1.8e-06 54.7 33 66.7
RcHm_v2.0_Chr2g0105091 Rosa chinensis HOM05D001474 ORTHO05D001461 1.8e-06 54.7 33 69.7
Aqoxy5G01266 Aquilegia oxysepala HOM05D001474 ORTHO05D001461 2.3e-06 54.3 33 66.7
CiPaw.01G019500 Carya illinoinensis HOM05D001474 ORTHO05D001461 2.3e-06 54.3 33 66.7
AUR62001945 Chenopodium quinoa HOM05D001474 ORTHO05D001461 2.3e-06 54.3 33 66.7
CsaV3_2G016840 Cucumis sativus L. HOM05D001474 ORTHO05D001461 2.3e-06 54.3 33 69.7
Gohir.A11G191000 Gossypium hirsutum HOM05D001474 ORTHO05D001461 2.3e-06 54.3 33 69.7
Gohir.D11G197800 Gossypium hirsutum HOM05D001474 ORTHO05D001461 2.3e-06 54.3 33 69.7
Gorai.007G211700 Gossypium raimondii HOM05D001474 ORTHO05D001461 2.3e-06 54.3 33 69.7
ATR0100G007 Amborella trichopoda HOM05D001474 ORTHO05D001461 3.0e-06 53.9 33 66.7
AL7G13820 Arabidopsis lyrata HOM05D001474 ORTHO05D001461 3.0e-06 53.9 33 69.7
AT4G37040 Arabidopsis thaliana HOM05D001474 ORTHO05D001461 3.0e-06 53.9 33 69.7
EL10Ac6g15763 Beta vulgaris HOM05D001474 ORTHO05D001461 3.0e-06 53.9 33 60.6
CANSAT01G0821 Cannabis sativa HOM05D001474 ORTHO05D001461 3.0e-06 53.9 33 69.7
MELO3C020895.2 Cucumis melo HOM05D001474 ORTHO05D001461 3.0e-06 53.9 33 66.7
Prupe.7G135200 Prunus persica HOM05D001474 ORTHO05D001461 3.0e-06 53.9 33 66.7
Ah.03g144870 Amaranthus hybridus HOM05D001474 ORTHO05D001461 3.9e-06 53.5 33 63.6
BcaC01g00431 Brassica carinata HOM05D001474 ORTHO05D001461 3.9e-06 53.5 33 66.7
C03p79670 Brassica napus HOM05D001349 ORTHO05D008727 3.9e-06 53.5 33 66.7
Cpa.g.sc55.168 Carica papaya HOM05D001474 ORTHO05D001461 3.9e-06 53.5 33 66.7
Sabra05G0109700 Salix brachista HOM05D001474 ORTHO05D001461 3.9e-06 53.5 33 66.7
Ciclev10025966m.g Citrus clementina HOM05D001474 ORTHO05D001461 5.1e-06 53.1 33 66.7
MD02G1169900 Malus domestica HOM05D001474 ORTHO05D001461 5.1e-06 53.1 33 63.6
Sed0001318 Sechium edule HOM05D001474 ORTHO05D001461 5.1e-06 53.1 33 66.7
THA.LOC104819841 Tarenaya hassleriana HOM05D001474 ORTHO05D001461 5.1e-06 53.1 33 66.7
TWI09G0767 Tripterygium wilfordii HOM05D001474 ORTHO05D001461 5.1e-06 53.1 33 63.6
Aa31LG9G4830 Aethionema arabicum HOM05D001474 ORTHO05D001461 6.7e-06 52.8 33 66.7
FAN23G0739 Fragaria x ananassa HOM05D001474 ORTHO05D001461 6.7e-06 52.8 33 66.7
COL.COLO4_11394 Corchorus olitorius HOM05D000369 ORTHO05D001461 8.8e-06 52.4 33 63.6
Dinv39866 Davidia involucrata HOM05D001474 ORTHO05D001461 8.8e-06 52.4 33 66.7
Glyma.01G185300 Glycine max HOM05D001474 ORTHO05D001461 8.8e-06 52.4 33 63.6
Hma1.2p1_0200F.1_g085980 Hydrangea macrophylla HOM05D001474 ORTHO05D001461 8.8e-06 52.4 33 63.6
Nn5g30230 Nelumbo nucifera HOM05D001474 ORTHO05D001461 8.8e-06 52.4 33 63.6
TAR381G0509 Trochodendron aralioides HOM05D001474 ORTHO05D001461 8.8e-06 52.4 33 63.6


User provided reference genes

Program Settings