Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p35770 Brassica napus HOM05D005852 ORTHO05D006688 2.3e-151 538.9 279 100.0
C02p58000 Brassica napus HOM05D005852 ORTHO05D006688 8.3e-149 530.4 279 98.2
BolC2t11869H Brassica oleracea HOM05D005852 ORTHO05D006688 1.5e-134 483.0 329 81.2
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 3.2e-108 395.6 230 90.9
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 7.1e-108 394.4 229 91.3
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 7.4e-105 384.4 231 90.5
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 9.6e-105 384.0 231 90.5
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 3.3e-97 359.0 228 84.6
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 6.0e-91 338.2 233 79.4
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 6.0e-91 338.2 233 79.4
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 6.0e-91 338.2 233 79.8
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 1.0e-90 337.4 232 79.3
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 1.8e-90 336.7 233 79.8
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 1.3e-88 330.5 232 78.4
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 1.5e-81 307.0 203 76.8
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 5.9e-78 295.0 231 72.3
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 5.9e-78 295.0 199 74.9
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 2.1e-75 286.6 220 69.1
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 2.3e-74 283.1 219 67.6
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 3.0e-74 282.7 219 67.1
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 1.5e-73 280.4 196 70.9
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 2.6e-73 279.6 219 66.2
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 3.3e-73 279.3 225 64.4
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 3.3e-73 279.3 219 66.7
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 3.3e-73 279.3 207 69.6
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 5.7e-73 278.5 219 65.8
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 5.7e-73 278.5 219 66.2
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 9.7e-73 277.7 213 66.7
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 9.7e-73 277.7 220 66.4
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 9.7e-73 277.7 220 67.7
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 9.7e-73 277.7 196 70.9
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 1.3e-72 277.3 219 65.3
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 1.7e-72 276.9 222 66.2
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 2.2e-72 276.6 214 69.2
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 2.8e-72 276.2 196 71.9
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 3.7e-72 275.8 219 66.7
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 6.3e-72 275.0 221 66.5
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 1.1e-71 274.2 219 66.7
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 9.1e-71 271.2 221 66.1
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 9.1e-71 271.2 223 65.9
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 1.5e-70 270.4 200 71.0
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 2.6e-70 269.6 195 71.8
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 2.6e-70 269.6 198 71.2
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 2.6e-70 269.6 220 65.0
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 4.5e-70 268.9 226 63.7
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 5.9e-70 268.5 220 65.0
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 5.9e-70 268.5 221 66.5
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 5.9e-70 268.5 219 66.2
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 7.7e-70 268.1 196 69.4
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 1.0e-69 267.7 226 63.7
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 1.3e-69 267.3 196 70.9
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 1.3e-69 267.3 229 61.6
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 1.3e-69 267.3 223 65.9
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 1.7e-69 266.9 220 63.6
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 2.2e-69 266.5 220 64.1
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 2.9e-69 266.2 215 66.5
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 3.8e-69 265.8 218 65.1
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 5.0e-69 265.4 220 64.5
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 5.0e-69 265.4 195 70.3
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 6.5e-69 265.0 221 63.3
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 6.5e-69 265.0 189 70.4
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 6.5e-69 265.0 223 65.5
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 8.5e-69 264.6 223 65.5
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 1.1e-68 264.2 228 65.4
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 1.1e-68 264.2 220 64.1
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 1.1e-68 264.2 195 70.3
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 2.5e-68 263.1 202 69.3
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 4.2e-68 262.3 225 65.3
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 5.5e-68 261.9 198 68.7
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 5.5e-68 261.9 225 62.2
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 7.2e-68 261.5 223 65.5
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 7.2e-68 261.5 198 68.7
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.2e-67 260.8 231 63.2
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.2e-67 260.8 231 63.2
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.6e-67 260.4 197 69.0
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.7e-67 259.6 221 65.2
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 2.7e-67 259.6 222 62.2
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 3.6e-67 259.2 190 70.5
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 3.6e-67 259.2 221 64.7
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 3.6e-67 259.2 221 64.7
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 3.6e-67 259.2 223 64.1
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 4.7e-67 258.8 190 71.1
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 4.7e-67 258.8 221 64.7
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 7.9e-67 258.1 199 67.3
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 7.9e-67 258.1 197 68.0
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 2.3e-66 256.5 222 63.1
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 2.3e-66 256.5 219 63.5
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 3.9e-66 255.8 193 68.9
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 3.9e-66 255.8 186 70.4
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 3.9e-66 255.8 214 63.6
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 1.1e-65 254.2 198 70.2
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 1.1e-65 254.2 196 65.3
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 2.2e-64 250.0 197 69.0
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 2.2e-64 250.0 204 66.2
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 2.8e-64 249.6 200 66.5
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 4.8e-64 248.8 234 59.0
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 2.4e-63 246.5 236 59.3
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 2.0e-62 243.4 231 60.2
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 1.0e-61 241.1 220 62.3
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 3.8e-61 239.2 218 60.1
BcaNung00812 Brassica carinata HOM05D005852 ORTHO05D006688 8.5e-61 238.0 128 98.4
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 1.1e-60 237.7 232 57.3
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 3.2e-60 236.1 199 62.8
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 4.7e-59 232.3 223 55.6
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 4.7e-59 232.3 277 53.1
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 1.5e-57 227.3 208 59.1
BolC5t33669H Brassica oleracea HOM05D005852 ORTHO05D006688 3.3e-57 226.1 189 68.3
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 7.5e-57 224.9 237 55.7
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 9.7e-57 224.6 170 67.6
Nn3g21757 Nelumbo nucifera HOM05D005852 ORTHO05D006688 2.8e-56 223.0 172 64.5
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 8.2e-56 221.5 172 66.3
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 1.1e-55 221.1 206 59.2
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 1.6e-54 217.2 225 54.7
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 2.5e-52 209.9 230 57.0
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 1.7e-40 170.6 199 48.7
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 1.0e-37 161.4 238 45.0
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 1.5e-36 157.5 198 44.4
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 3.0e-34 149.8 229 39.7
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 4.9e-32 142.5 217 40.6
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 1.1e-31 141.4 234 40.6
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 7.0e-31 138.7 102 72.5
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 3.3e-28 129.8 145 49.0
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 1.4e-26 124.4 196 39.8
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 1.7e-24 117.5 80 67.5
BcaC03g15843 Brassica carinata HOM05D005852 ORTHO05D006688 3.1e-18 96.7 51 92.2
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 2.8e-11 73.6 76 57.9
Lsat_1_v5_gn_3_89981 Lactuca sativa HOM05D005852 ORTHO05D006688 5.2e-10 69.3 107 40.2
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.4e-07 61.2 53 62.3


User provided reference genes

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