Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p35750 Brassica napus HOM05D002382 ORTHO05D032268 5.6e-30 133.7 69 100.0
C05p56830 Brassica napus HOM05D002382 ORTHO05D032268 1.8e-28 128.6 69 95.7
BcaC01g05493 Brassica carinata HOM05D002382 ORTHO05D032268 1.1e-20 102.8 61 86.9
BcaB07g32883 Brassica carinata HOM05D002382 ORTHO05D094399 4.0e-12 74.3 54 79.6
C08p21430 Brassica napus HOM05D002382 ORTHO05D002622 5.3e-12 73.9 73 64.4
BolC8t49782H Brassica oleracea HOM05D002382 ORTHO05D002622 5.3e-12 73.9 73 64.4
BcaC07g39149 Brassica carinata HOM05D002382 ORTHO05D002622 9.0e-12 73.2 51 78.4
BcaB01g02503 Brassica carinata HOM05D002382 ORTHO05D002622 1.3e-10 69.3 57 66.7
BcaB07g32696 Brassica carinata HOM05D002382 ORTHO05D002622 2.9e-10 68.2 59 67.8
BcaB03g12607 Brassica carinata HOM05D002382 ORTHO05D002622 6.0e-08 60.5 46 71.7
BcaC01g01170 Brassica carinata HOM05D002382 ORTHO05D002622 6.0e-08 60.5 46 71.7
BcaNung00475 Brassica carinata HOM05D002382 ORTHO05D002622 6.0e-08 60.5 46 71.7
A03p58940 Brassica napus HOM05D002382 ORTHO05D002622 6.0e-08 60.5 46 71.7
A08p19680 Brassica napus HOM05D002382 ORTHO05D002622 6.0e-08 60.5 46 71.7
C03p89300 Brassica napus HOM05D002382 ORTHO05D002622 6.0e-08 60.5 46 71.7
BolC3t21240H Brassica oleracea HOM05D002382 ORTHO05D002622 6.0e-08 60.5 46 71.7
BraA03t14954Z Brassica rapa HOM05D002382 ORTHO05D002622 6.0e-08 60.5 46 71.7
BraA08t33926Z Brassica rapa HOM05D002382 ORTHO05D002622 6.0e-08 60.5 46 71.7
BcaB07g32670 Brassica carinata HOM05D002382 ORTHO05D002622 1.0e-07 59.7 36 83.3
BcaC07g41242 Brassica carinata HOM05D002382 ORTHO05D002622 3.9e-07 57.8 47 68.1
C08p42480 Brassica napus HOM05D002382 ORTHO05D002622 3.9e-07 57.8 47 68.1
BcaB05g22895 Brassica carinata HOM05D002382 ORTHO05D095646 5.1e-07 57.4 35 82.9
BcaC09g51726 Brassica carinata HOM05D002382 ORTHO05D002622 6.7e-07 57.0 46 67.4
A01p08620 Brassica napus HOM05D002382 ORTHO05D002622 6.7e-07 57.0 46 67.4
C01p10090 Brassica napus HOM05D002382 ORTHO05D002622 6.7e-07 57.0 46 67.4
BolC1t00967H Brassica oleracea HOM05D002382 ORTHO05D002622 6.7e-07 57.0 46 67.4
Thhalv10026507m.g Eutrema salsugineum HOM05D002382 ORTHO05D002622 6.7e-07 57.0 46 67.4
AL7G22990 Arabidopsis lyrata HOM05D002382 ORTHO05D002622 8.7e-07 56.6 46 65.2
C07p56920 Brassica napus HOM05D002382 ORTHO05D002622 8.7e-07 56.6 45 68.9
BolC7t46169H Brassica oleracea HOM05D002171 ORTHO05D002220 8.7e-07 56.6 45 68.9
Sp7g27290 Schrenkiella parvula HOM05D002382 ORTHO05D002622 8.7e-07 56.6 46 67.4
AT4G29410 Arabidopsis thaliana HOM05D002382 ORTHO05D002622 1.1e-06 56.2 47 66.0
BolC8t51809H Brassica oleracea HOM05D002382 ORTHO05D002622 1.5e-06 55.8 46 67.4
AL3G48510 Arabidopsis lyrata HOM05D002382 ORTHO05D002622 1.9e-06 55.5 46 67.4
AT2G19730 Arabidopsis thaliana HOM05D002382 ORTHO05D002622 1.9e-06 55.5 46 67.4
Carub.0003s3401 Capsella rubella HOM05D002382 ORTHO05D002622 1.9e-06 55.5 46 67.4
BcaB03g16754 Brassica carinata HOM05D002382 ORTHO05D002622 2.5e-06 55.1 46 67.4
BcaB08g34878 Brassica carinata HOM05D002382 ORTHO05D002622 2.5e-06 55.1 46 67.4
BcaC04g22833 Brassica carinata HOM05D002382 ORTHO05D002622 2.5e-06 55.1 46 67.4
BcaC06g36612 Brassica carinata HOM05D002382 ORTHO05D002622 2.5e-06 55.1 46 67.4
C07p02170 Brassica napus HOM05D002382 ORTHO05D002622 2.5e-06 55.1 46 67.4
C09p14830 Brassica napus HOM05D002382 ORTHO05D002622 2.5e-06 55.1 46 67.4
BolC7t40626H Brassica oleracea HOM05D002382 ORTHO05D002622 2.5e-06 55.1 46 67.4
BolC9t54383H Brassica oleracea HOM05D002382 ORTHO05D002622 2.5e-06 55.1 46 67.4
BraA09t36896Z Brassica rapa HOM05D002382 ORTHO05D002622 2.5e-06 55.1 46 67.4
Thhalv10002093m.g Eutrema salsugineum HOM05D002382 ORTHO05D002622 3.3e-06 54.7 46 67.4
Sp3g33060 Schrenkiella parvula HOM05D002382 ORTHO05D002622 3.3e-06 54.7 46 67.4
Aa31LG2G21020 Aethionema arabicum HOM05D002382 ORTHO05D002622 4.3e-06 54.3 46 60.9
A09p59190 Brassica napus HOM05D002382 ORTHO05D002622 4.3e-06 54.3 46 63.0
BraA09t41303Z Brassica rapa HOM05D002382 ORTHO05D002622 4.3e-06 54.3 46 63.0
CARHR110180 Cardamine hirsuta HOM05D002382 ORTHO05D002622 4.3e-06 54.3 46 63.0
A07p01010 Brassica napus HOM05D002382 ORTHO05D002622 5.6e-06 53.9 46 65.2
BraA07t27902Z Brassica rapa HOM05D002382 ORTHO05D002622 5.6e-06 53.9 46 65.2
Aa31LG8G16700 Aethionema arabicum HOM05D002382 ORTHO05D002622 9.6e-06 53.1 46 65.2


User provided reference genes

Program Settings