Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p35740 Brassica napus HOM05D065278 ORTHO05D042548 1.3e-224 782.7 406 100.0
BolC4t28763H Brassica oleracea HOM05D065278 ORTHO05D042548 5.4e-181 637.9 360 92.2
C08p42150 Brassica napus HOM05D001783 ORTHO05D003692 1.7e-54 217.6 450 36.7
BolC8t51775H Brassica oleracea HOM05D001783 ORTHO05D003692 1.7e-54 217.6 450 36.7
BolC8t49500H Brassica oleracea HOM05D000848 ORTHO05D000007 2.1e-47 194.1 462 34.8
BolC1t02100H Brassica oleracea HOM05D000848 ORTHO05D000007 1.3e-46 191.4 433 36.5
C01p21760 Brassica napus HOM05D000003 ORTHO05D000007 6.6e-46 189.1 433 36.0
BraA08t33528Z Brassica rapa HOM05D000848 ORTHO05D000007 1.5e-37 161.4 550 30.2
BcaB01g00854 Brassica carinata HOM05D000848 ORTHO05D000007 1.9e-37 161.0 554 30.0
C03p50040 Brassica napus HOM05D000848 ORTHO05D000007 3.3e-37 160.2 503 31.0
BolC3t17296H Brassica oleracea HOM05D000848 ORTHO05D000007 3.3e-37 160.2 503 31.0
A01p06400 Brassica napus HOM05D000848 ORTHO05D000007 4.7e-36 156.4 538 30.1
BolC2t09306H Brassica oleracea HOM05D000848 ORTHO05D000007 1.1e-32 145.2 355 33.2
C04p08060 Brassica napus HOM05D000848 ORTHO05D000007 3.5e-31 140.2 247 36.4
BolC3t17049H Brassica oleracea HOM05D000848 ORTHO05D000007 2.3e-30 137.5 410 32.0
BolC1t04728H Brassica oleracea HOM05D000848 ORTHO05D000007 1.5e-29 134.8 359 32.9
C02p34040 Brassica napus HOM05D040898 ORTHO05D032199 5.6e-29 132.9 80 73.8
A01p37480 Brassica napus HOM05D000848 ORTHO05D000007 1.3e-28 131.7 527 28.1
BraA01t03806Z Brassica rapa HOM05D000848 ORTHO05D000007 1.3e-28 131.7 527 28.1
C01p47580 Brassica napus HOM05D000848 ORTHO05D000007 2.1e-28 131.0 355 32.7
BolC3t17213H Brassica oleracea HOM05D000848 ORTHO05D000007 2.1e-28 131.0 476 28.6
C02p14550 Brassica napus HOM05D000848 ORTHO05D000007 2.6e-26 124.0 433 29.3
BolC2t07581H Brassica oleracea HOM05D000848 ORTHO05D000007 2.6e-26 124.0 433 29.3
C06p38300 Brassica napus HOM05D000848 ORTHO05D000007 5.4e-24 116.3 298 33.9
Carub.0007s3665 Capsella rubella HOM05D000848 ORTHO05D000007 3.5e-23 113.6 382 27.5
A09p52770 Brassica napus HOM05D000848 ORTHO05D000007 8.7e-22 109.0 176 39.2
Carub.0003s3297 Capsella rubella HOM05D000848 ORTHO05D000007 1.3e-20 105.1 176 38.6
BolC3t18651H Brassica oleracea HOM05D000848 ORTHO05D000007 1.1e-19 102.1 94 48.9
BolC8t46845H Brassica oleracea HOM05D000848 ORTHO05D000007 1.4e-19 101.7 383 27.2
Carub.0005s0879 Capsella rubella HOM05D000848 ORTHO05D000007 3.1e-19 100.5 223 33.6
C02p41870 Brassica napus HOM05D000848 ORTHO05D000007 4.0e-19 100.1 129 38.8
C03p63970 Brassica napus HOM05D000848 ORTHO05D000007 4.5e-18 96.7 199 34.2
BolC2t11978H Brassica oleracea HOM05D000848 ORTHO05D000007 4.5e-18 96.7 473 29.4
Carub.0002s0096 Capsella rubella HOM05D000003 ORTHO05D000007 5.8e-18 96.3 277 31.4
Carub.0003s3035 Capsella rubella HOM05D000848 ORTHO05D000007 1.3e-17 95.1 525 25.9
BraA03t14225Z Brassica rapa HOM05D000848 ORTHO05D000007 1.7e-17 94.7 227 29.5
BraA08t33282Z Brassica rapa HOM05D000848 ORTHO05D000007 2.2e-17 94.4 365 26.0
BolC5t32237H Brassica oleracea HOM05D000848 ORTHO05D000007 2.9e-17 94.0 145 36.6
BolC1t04199H Brassica oleracea HOM05D000848 ORTHO05D000007 8.4e-17 92.4 180 31.7
C05p35210 Brassica napus HOM05D000848 ORTHO05D000007 1.4e-16 91.7 145 35.9
BolC7t44685H Brassica oleracea HOM05D000848 ORTHO05D000007 1.9e-16 91.3 221 29.9
Carub.0002s0838 Capsella rubella HOM05D000848 ORTHO05D000007 1.9e-16 91.3 502 23.7
BolC6t39016H Brassica oleracea HOM05D000848 ORTHO05D000007 2.4e-16 90.9 245 32.2
BolC1t04980H Brassica oleracea HOM05D000848 ORTHO05D000007 4.2e-16 90.1 245 32.2
C05p48290 Brassica napus HOM05D000848 ORTHO05D000007 7.1e-16 89.4 119 37.0
C08p15060 Brassica napus HOM05D000848 ORTHO05D032182 1.2e-15 88.6 119 37.0
BolC8t49135H Brassica oleracea HOM05D000848 ORTHO05D000007 1.2e-15 88.6 119 37.0
Carub.0001s4487 Capsella rubella HOM05D000848 ORTHO05D000007 1.2e-15 88.6 225 28.4
Carub.0008s2858 Capsella rubella HOM05D000848 ORTHO05D000007 1.6e-15 88.2 511 26.6
C09p27370 Brassica napus HOM05D000848 ORTHO05D000007 2.1e-15 87.8 158 32.9
BraA01t03344Z Brassica rapa HOM05D000848 ORTHO05D000007 2.7e-15 87.4 374 25.4
Carub.0001s3283 Capsella rubella HOM05D000848 ORTHO05D000007 3.5e-15 87.0 252 31.0
Carub.0005s0763 Capsella rubella HOM05D000848 ORTHO05D000007 6.0e-15 86.3 549 23.1
BolC3t21044H Brassica oleracea HOM05D000848 ORTHO05D000007 7.9e-15 85.9 117 38.5
BolC5t30929H Brassica oleracea HOM05D000848 ORTHO05D040505 2.3e-14 84.3 208 29.3
BraA07t27806Z Brassica rapa HOM05D000848 ORTHO05D000007 6.7e-14 82.8 256 28.1
CARHR146770 Cardamine hirsuta HOM05D000848 ORTHO05D000007 6.7e-14 82.8 310 26.1
C05p27570 Brassica napus HOM05D000848 ORTHO05D000007 8.7e-14 82.4 332 27.4
BolC5t31477H Brassica oleracea HOM05D000848 ORTHO05D000007 8.7e-14 82.4 332 27.4
C07p32730 Brassica napus HOM05D000848 ORTHO05D000007 2.5e-13 80.9 124 39.5
C08p33080 Brassica napus HOM05D000848 ORTHO05D000007 2.5e-13 80.9 119 35.3
BolC1t05041H Brassica oleracea HOM05D000848 ORTHO05D000007 2.5e-13 80.9 427 23.9
BolC8t50908H Brassica oleracea HOM05D000848 ORTHO05D000007 2.5e-13 80.9 119 35.3
BolC3t16924H Brassica oleracea HOM05D000179 ORTHO05D000007 4.3e-13 80.1 325 23.1
BolC6t38928H Brassica oleracea HOM05D007946 ORTHO05D004325 5.6e-13 79.7 187 35.8
C07p22400 Brassica napus HOM05D000848 ORTHO05D000007 9.6e-13 79.0 538 22.7
BolC7t42754H Brassica oleracea HOM05D000848 ORTHO05D000007 1.6e-12 78.2 388 22.9
BolC9t55117H Brassica oleracea HOM05D049274 ORTHO05D040268 1.6e-12 78.2 194 32.0
CARHR116590 Cardamine hirsuta HOM05D000848 ORTHO05D000007 4.8e-12 76.6 114 34.2
C02p33980 Brassica napus HOM05D000848 ORTHO05D000007 6.2e-12 76.3 275 30.9
BolC2t11933H Brassica oleracea HOM05D021383 ORTHO05D024339 3.1e-11 73.9 202 33.2
BolC9t55610H Brassica oleracea HOM05D000848 ORTHO05D000007 4.0e-11 73.6 144 31.9
C06p38290 Brassica napus HOM05D007946 ORTHO05D004325 3.4e-10 70.5 162 37.7
BolC9t54307H Brassica oleracea HOM05D000848 ORTHO05D000007 1.1e-08 65.5 247 27.1
BolC2t09997H Brassica oleracea HOM05D023457 ORTHO05D027375 7.1e-08 62.8 148 34.5
C06p26360 Brassica napus HOM05D021383 ORTHO05D024339 3.5e-07 60.5 131 35.9
BolC7t45230H Brassica oleracea HOM05D021383 ORTHO05D024339 4.6e-07 60.1 132 34.8
C08p18740 Brassica napus HOM05D000848 ORTHO05D039546 2.3e-06 57.8 108 41.7
C07p38610 Brassica napus HOM05D036366 ORTHO05D039668 3.0e-06 57.4 348 25.0
BcaC04g21942 Brassica carinata HOM05D001334 ORTHO05D001119 5.1e-06 56.6 122 36.1
BolC5t33992H Brassica oleracea HOM05D000848 ORTHO05D000007 6.7e-06 56.2 93 33.3
BraA02t09243Z Brassica rapa HOM05D000003 ORTHO05D107578 8.7e-06 55.8 64 48.4


User provided reference genes

Program Settings