Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p34720 Brassica napus HOM05D000170 ORTHO05D031320 6.6e-24 113.2 58 100.0
BcaB05g25056 Brassica carinata HOM05D000170 ORTHO05D000159 2.6e-20 101.3 54 94.4
BcaB05g25061 Brassica carinata HOM05D000170 ORTHO05D000159 4.4e-20 100.5 54 96.3
AT1G77520 Arabidopsis thaliana HOM05D000170 ORTHO05D000159 5.8e-20 100.1 54 92.6
BcaC03g15743 Brassica carinata HOM05D000170 ORTHO05D000159 1.3e-19 99.0 54 92.6
A02p21380 Brassica napus HOM05D000170 ORTHO05D000159 1.3e-19 99.0 54 90.7
C02p34670 Brassica napus HOM05D000170 ORTHO05D000159 1.3e-19 99.0 54 92.6
BolC2t09489H Brassica oleracea HOM05D000170 ORTHO05D000159 1.3e-19 99.0 54 92.6
CARHR071060 Cardamine hirsuta HOM05D000170 ORTHO05D000159 1.4e-18 95.5 54 88.9
AT1G77530 Arabidopsis thaliana HOM05D000170 ORTHO05D000159 2.4e-18 94.7 54 88.9
Sp5g32700 Schrenkiella parvula HOM05D000170 ORTHO05D000159 7.0e-18 93.2 54 90.7
AL2G37740 Arabidopsis lyrata HOM05D000170 ORTHO05D000159 9.2e-18 92.8 54 87.0
Carub.0002s2442 Capsella rubella HOM05D000170 ORTHO05D000159 1.6e-17 92.0 54 88.9
Thhalv10018703m.g Eutrema salsugineum HOM05D000170 ORTHO05D000159 7.8e-17 89.7 55 87.3
CARHR071040 Cardamine hirsuta HOM05D000170 ORTHO05D000159 1.7e-16 88.6 54 85.2
BcaC06g31637 Brassica carinata HOM05D000170 ORTHO05D000159 4.3e-15 84.0 54 83.3
C07p26980 Brassica napus HOM05D000170 ORTHO05D000159 4.3e-15 84.0 54 83.3
BcaC06g34573 Brassica carinata HOM05D000170 ORTHO05D000159 1.2e-14 82.4 54 81.5
BolC7t43228H Brassica oleracea HOM05D000170 ORTHO05D000159 1.2e-14 82.4 54 81.5
Carub.0007s0887 Capsella rubella HOM05D000170 ORTHO05D000159 1.2e-14 82.4 56 71.4
BcaC03g15747 Brassica carinata HOM05D000170 ORTHO05D000159 1.6e-14 82.0 54 81.5
A02p21420 Brassica napus HOM05D000170 ORTHO05D000159 1.6e-14 82.0 54 81.5
C02p34800 Brassica napus HOM05D000170 ORTHO05D000159 1.6e-14 82.0 54 81.5
BolC2t09499H Brassica oleracea HOM05D000170 ORTHO05D000159 1.6e-14 82.0 54 81.5
BraA02t07154Z Brassica rapa HOM05D000170 ORTHO05D000159 1.6e-14 82.0 54 81.5
BcaC06g34578 Brassica carinata HOM05D000170 ORTHO05D000159 2.1e-14 81.6 54 81.5
C07p26930 Brassica napus HOM05D000170 ORTHO05D000159 2.1e-14 81.6 54 81.5
BolC7t43221H Brassica oleracea HOM05D000170 ORTHO05D000159 2.1e-14 81.6 54 81.5
A06p47350 Brassica napus HOM05D000170 ORTHO05D000159 2.8e-14 81.3 54 81.5
BraA06t27605Z Brassica rapa HOM05D000170 ORTHO05D000159 2.8e-14 81.3 54 81.5
A07p27970 Brassica napus HOM05D000170 ORTHO05D000159 1.1e-13 79.3 54 77.8
BcaC08g45474 Brassica carinata HOM05D000170 ORTHO05D000159 1.4e-13 79.0 54 77.8
BolC6t38262H Brassica oleracea HOM05D000170 ORTHO05D000159 1.4e-13 79.0 54 77.8
C06p31220 Brassica napus HOM05D000170 ORTHO05D000159 3.1e-13 77.8 54 77.8
Carub.0002s2443 Capsella rubella HOM05D000170 ORTHO05D000159 6.8e-13 76.6 54 79.6
BraA07t30442Z Brassica rapa HOM05D000170 ORTHO05D000159 8.9e-13 76.3 54 75.9
CARHR071050 Cardamine hirsuta HOM05D000170 ORTHO05D000159 8.9e-13 76.3 54 79.6
AL1G57870 Arabidopsis lyrata HOM05D000170 ORTHO05D031320 9.8e-12 72.8 55 69.1
BcaC04g22475 Brassica carinata HOM05D000170 ORTHO05D000159 1.3e-11 72.4 54 68.5
C09p18870 Brassica napus HOM05D000170 ORTHO05D000159 1.3e-11 72.4 54 68.5
BolC9t54789H Brassica oleracea HOM05D000170 ORTHO05D000159 1.3e-11 72.4 54 68.5
Aa31LG2G620 Aethionema arabicum HOM05D000170 ORTHO05D000159 3.7e-11 70.9 54 74.1
CARHR048360 Cardamine hirsuta HOM05D000170 ORTHO05D000159 4.9e-11 70.5 54 66.7
Sp2g01440 Schrenkiella parvula HOM05D000170 ORTHO05D000159 4.9e-11 70.5 54 70.4
A09p15650 Brassica napus HOM05D000170 ORTHO05D000159 6.4e-11 70.1 54 66.7
BraA09t37206Z Brassica rapa HOM05D000170 ORTHO05D000159 6.4e-11 70.1 54 66.7
AL2G12360 Arabidopsis lyrata HOM05D000170 ORTHO05D000159 1.1e-10 69.3 54 66.7
BcaB07g31386 Brassica carinata HOM05D000170 ORTHO05D000159 1.4e-10 68.9 54 64.8
BraA08t33813Z Brassica rapa HOM05D000170 ORTHO05D000159 1.9e-10 68.6 55 58.2
Sp2g06080 Schrenkiella parvula HOM05D000170 ORTHO05D000159 4.1e-10 67.4 55 67.3
AL2G12370 Arabidopsis lyrata HOM05D000170 ORTHO05D000159 5.4e-10 67.0 54 63.0
Aa31LG4G7590 Aethionema arabicum HOM05D000170 ORTHO05D000159 2.1e-09 65.1 55 67.3
C03p87690 Brassica napus HOM05D000170 ORTHO05D000159 2.1e-09 65.1 54 55.6
BolC3t21085H Brassica oleracea HOM05D000170 ORTHO05D000159 2.1e-09 65.1 54 55.6
BcaB03g12712 Brassica carinata HOM05D000170 ORTHO05D000159 2.7e-09 64.7 54 57.4
Carub.0002s0178 Capsella rubella HOM05D000170 ORTHO05D000159 2.7e-09 64.7 55 65.5
Aa31LG4G7580 Aethionema arabicum HOM05D000170 ORTHO05D000159 4.6e-09 63.9 54 70.4
BcaC08g45473 Brassica carinata HOM05D000170 ORTHO05D000159 4.6e-09 63.9 56 62.5
BolC6t38261H Brassica oleracea HOM05D000170 ORTHO05D000159 4.6e-09 63.9 56 62.5
CARHR230420 Cardamine hirsuta HOM05D000170 ORTHO05D000159 4.6e-09 63.9 54 63.0
CARHR048350 Cardamine hirsuta HOM05D000170 ORTHO05D000159 6.0e-09 63.5 54 57.4
BcaB02g07110 Brassica carinata HOM05D000170 ORTHO05D000159 7.8e-09 63.2 55 63.6
BcaB05g23072 Brassica carinata HOM05D000170 ORTHO05D031320 1.0e-08 62.8 55 60.0
AT1G63140 Arabidopsis thaliana HOM05D000170 ORTHO05D000159 2.3e-08 61.6 54 61.1
A08p18510 Brassica napus HOM05D000170 ORTHO05D000159 3.9e-08 60.8 55 56.4
BcaC04g21224 Brassica carinata HOM05D000170 ORTHO05D000159 5.1e-08 60.5 54 57.4
A07p06110 Brassica napus HOM05D000170 ORTHO05D000159 5.1e-08 60.5 54 57.4
C09p34150 Brassica napus HOM05D000170 ORTHO05D000159 5.1e-08 60.5 54 57.4
BolC9t56261H Brassica oleracea HOM05D000170 ORTHO05D000159 5.1e-08 60.5 54 57.4
BraA01t02629Z Brassica rapa HOM05D000170 ORTHO05D000159 5.1e-08 60.5 54 57.4
BraA07t28409Z Brassica rapa HOM05D000170 ORTHO05D000159 5.1e-08 60.5 54 57.4
CARHR048370 Cardamine hirsuta HOM05D000170 ORTHO05D000159 5.1e-08 60.5 54 59.3
Aa31LG4G7600 Aethionema arabicum HOM05D000170 ORTHO05D000159 6.6e-08 60.1 55 65.5
Carub.0005s0434 Capsella rubella HOM05D000170 ORTHO05D000159 6.6e-08 60.1 54 61.1
BcaC06g31938 Brassica carinata HOM05D000170 ORTHO05D000159 1.5e-07 58.9 54 59.3
Thhalv10015575m.g Eutrema salsugineum HOM05D000170 ORTHO05D000159 3.3e-07 57.8 54 59.3
A07p27950 Brassica napus HOM05D000170 ORTHO05D000159 4.3e-07 57.4 54 59.3
CARHR266950 Cardamine hirsuta HOM05D000170 ORTHO05D000159 5.6e-07 57.0 54 59.3
A07p42980 Brassica napus HOM05D000170 ORTHO05D000159 1.6e-06 55.5 54 57.4
C06p31200 Brassica napus HOM05D000170 ORTHO05D000159 1.6e-06 55.5 54 57.4
Carub.0002s0181 Capsella rubella HOM05D000170 ORTHO05D000159 1.6e-06 55.5 54 59.3
Thhalv10025490m.g Eutrema salsugineum HOM05D000170 ORTHO05D000159 1.6e-06 55.5 55 60.0
Aa31LG4G7550 Aethionema arabicum HOM05D000170 ORTHO05D000159 2.1e-06 55.1 54 63.0
Carub.0008s1410 Capsella rubella HOM05D000170 ORTHO05D000159 2.8e-06 54.7 54 55.6
C06p51620 Brassica napus HOM05D000170 ORTHO05D000159 3.6e-06 54.3 54 55.6
BolC6t40180H Brassica oleracea HOM05D000170 ORTHO05D000159 3.6e-06 54.3 54 55.6
BcaB03g15944 Brassica carinata HOM05D000170 ORTHO05D000159 6.2e-06 53.5 54 55.6


User provided reference genes

Program Settings