Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p34480 Brassica napus HOM05D001245 ORTHO05D004475 1.4e-34 149.1 73 100.0
Thhalv10018076m.g Eutrema salsugineum HOM05D001245 ORTHO05D004475 1.7e-13 79.0 51 82.4
AL2G37520 Arabidopsis lyrata HOM05D001245 ORTHO05D004475 1.1e-12 76.3 48 83.3
AT1G77320 Arabidopsis thaliana HOM05D001245 ORTHO05D004475 1.1e-12 76.3 48 83.3
BcaB04g19399 Brassica carinata HOM05D001245 ORTHO05D004475 1.5e-12 75.9 47 85.1
Sp5g32500 Schrenkiella parvula HOM05D001245 ORTHO05D004475 1.9e-12 75.5 48 83.3
A07p42860 Brassica napus HOM05D001245 ORTHO05D004475 3.3e-12 74.7 48 83.3
BraA07t31807Z Brassica rapa HOM05D001245 ORTHO05D004475 3.3e-12 74.7 48 83.3
BolC2t09478H Brassica oleracea HOM05D001245 ORTHO05D004475 9.5e-12 73.2 52 78.8
CARHR070810 Cardamine hirsuta HOM05D001245 ORTHO05D004475 9.5e-12 73.2 48 81.2
Gohir.D03G069003 Gossypium hirsutum HOM05D001245 ORTHO05D004475 8.0e-11 70.1 57 64.9
Gorai.013G107700 Gossypium raimondii HOM05D001245 ORTHO05D004475 8.0e-11 70.1 57 64.9
Gohir.A02G110400 Gossypium hirsutum HOM05D001245 ORTHO05D004475 1.0e-10 69.7 57 64.9
GSVIVG01008809001 Vitis vinifera HOM05D001245 ORTHO05D004475 1.4e-10 69.3 46 76.1
BcaC08g47618 Brassica carinata HOM05D001245 ORTHO05D004475 1.8e-10 68.9 44 79.5
C06p51480 Brassica napus HOM05D001245 ORTHO05D004475 1.8e-10 68.9 44 79.5
BolC6t40166H Brassica oleracea HOM05D001245 ORTHO05D004475 1.8e-10 68.9 44 79.5
Lsat_1_v5_gn_1_6740 Lactuca sativa HOM05D001245 ORTHO05D004475 2.3e-10 68.6 46 73.9
QL09p032547 Quercus lobata HOM05D001245 ORTHO05D004475 2.3e-10 68.6 47 78.7
Actinidia03424 Actinidia chinensis HOM05D001245 ORTHO05D004475 5.2e-10 67.4 48 75.0
THA.LOC104800232 Tarenaya hassleriana HOM05D001245 ORTHO05D004475 5.2e-10 67.4 46 78.3
THA.LOC104810225 Tarenaya hassleriana HOM05D001245 ORTHO05D004475 5.2e-10 67.4 46 78.3
vmacro10605 Vaccinium macrocarpon HOM05D001245 ORTHO05D004475 1.2e-09 66.2 48 70.8
Carub.0002s2420 Capsella rubella HOM05D001245 ORTHO05D004475 1.5e-09 65.9 44 79.5
Migut.N01819 Erythranthe guttata HOM05D001245 ORTHO05D004475 1.5e-09 65.9 50 68.0
Cpa.g.sc64.150 Carica papaya HOM05D001245 ORTHO05D004475 2.0e-09 65.5 38 84.2
arahy.Tifrunner.gnm1.ann1.TXAW3L Arachis hypogaea HOM05D001245 ORTHO05D004475 2.6e-09 65.1 43 74.4
arahy.Tifrunner.gnm1.ann1.69Q1HU Arachis hypogaea HOM05D001245 ORTHO05D004475 3.4e-09 64.7 43 74.4
HanXRQChr02g0040561 Helianthus annuus HOM05D001245 ORTHO05D004475 3.4e-09 64.7 37 83.8
MD08G1159000 Malus domestica HOM05D001245 ORTHO05D004475 3.4e-09 64.7 48 72.9
RcHm_v2.0_Chr6g0296681 Rosa chinensis HOM05D001245 ORTHO05D004475 4.4e-09 64.3 47 72.3
Sed0010713 Sechium edule HOM05D001245 ORTHO05D004475 4.4e-09 64.3 44 75.0
Hma1.2p1_0014F.1_g010190 Hydrangea macrophylla HOM05D001245 ORTHO05D004475 5.8e-09 63.9 38 84.2
Hma1.2p1_1887F.1_g306530 Hydrangea macrophylla HOM05D001245 ORTHO05D004475 5.8e-09 63.9 38 84.2
Nn1g08963 Nelumbo nucifera HOM05D001245 ORTHO05D004475 5.8e-09 63.9 47 72.3
SalBow6G4599 Salvia bowleyana HOM05D001245 ORTHO05D004475 5.8e-09 63.9 56 57.1
CiPaw.16G022900 Carya illinoinensis HOM05D001245 ORTHO05D004475 7.5e-09 63.5 48 72.9
Duzib093G0162 Durio zibethinus HOM05D001245 ORTHO05D004475 7.5e-09 63.5 41 78.0
Potri.005G182500 Populus trichocarpa HOM05D001245 ORTHO05D004475 7.5e-09 63.5 41 75.6
Cfa018127 Carpinus fangiana HOM05D001245 ORTHO05D004475 9.8e-09 63.2 48 70.8
Lj4C682G10 Lonicera japonica HOM05D001245 ORTHO05D004475 9.8e-09 63.2 38 81.6
Manes.02G168200 Manihot esculenta HOM05D001245 ORTHO05D004475 9.8e-09 63.2 48 70.8
TWI34G1866 Tripterygium wilfordii HOM05D001245 ORTHO05D004475 9.8e-09 63.2 50 70.0
ClCG11G015970 Citrullus lanatus HOM05D001245 ORTHO05D004475 1.3e-08 62.8 38 81.6
Prupe.1G489800 Prunus persica HOM05D001245 ORTHO05D004475 1.3e-08 62.8 38 84.2
CANSAT80G2764 Cannabis sativa HOM05D001245 ORTHO05D004475 1.7e-08 62.4 38 78.9
CsaV3_4G028030 Cucumis sativus L. HOM05D001245 ORTHO05D004475 1.7e-08 62.4 35 88.6
Hund26774 Selenicereus undatus HOM05D001245 ORTHO05D004475 1.7e-08 62.4 47 66.0
CSS0013013 Camellia sinensis var. sinensis HOM05D001245 ORTHO05D004475 2.2e-08 62.0 46 69.6
Dinv14683 Davidia involucrata HOM05D001245 ORTHO05D004475 2.2e-08 62.0 38 78.9
Rhsim11G0071500 Rhododendron simsii HOM05D001245 ORTHO05D004475 2.2e-08 62.0 44 70.5
Sabra05G0138300 Salix brachista HOM05D001245 ORTHO05D004475 2.2e-08 62.0 38 78.9
Thecc.08G132800 Theobroma cacao HOM05D001245 ORTHO05D004475 2.2e-08 62.0 38 81.6
Atru.chr13.1560 Acer truncatum HOM05D001245 ORTHO05D004475 2.9e-08 61.6 48 68.8
Sc26g0002960 Simmondsia chinensis HOM05D001245 ORTHO05D004475 2.9e-08 61.6 49 67.3
CSS0038833 Camellia sinensis var. sinensis HOM05D001245 ORTHO05D004475 4.9e-08 60.8 45 71.1
COL.COLO4_08845 Corchorus olitorius HOM05D001245 ORTHO05D004475 4.9e-08 60.8 38 78.9
Peaxi162Scf00087g00021 Petunia axillaris HOM05D001245 ORTHO05D004475 4.9e-08 60.8 43 65.1
Glyma.16G005600 Glycine max HOM05D001245 ORTHO05D004475 8.3e-08 60.1 36 83.3
Lalb_Chr17g0343591 Lupinus albus HOM05D001245 ORTHO05D004475 8.3e-08 60.1 36 83.3
CANSAT25G1503 Cannabis sativa HOM05D001245 ORTHO05D004475 1.1e-07 59.7 38 76.3
ECA233G0473 Erigeron canadensis HOM05D001245 ORTHO05D004475 1.1e-07 59.7 36 80.6
Aa31LG4G7350 Aethionema arabicum HOM05D001245 ORTHO05D004475 1.4e-07 59.3 39 71.8
Aqoxy6G00310 Aquilegia oxysepala HOM05D001245 ORTHO05D004475 1.4e-07 59.3 49 67.3
Oeu009633.1 Olea europaea HOM05D001245 ORTHO05D004475 1.4e-07 59.3 36 77.8
PSO170G6194 Papaver somniferum HOM05D001245 ORTHO05D004475 1.9e-07 58.9 39 76.9
PSO528G0248 Papaver somniferum HOM05D001245 ORTHO05D004475 1.9e-07 58.9 39 76.9
MBI06_g35213_MAGBIO Magnolia biondii HOM05D001245 ORTHO05D004475 4.1e-07 57.8 35 77.1
CAN.G410.39 Capsicum annuum HOM05D001245 ORTHO05D004475 5.4e-07 57.4 37 73.0
Nitab4.5_0001543g0060 Nicotiana tabacum HOM05D001245 ORTHO05D004475 5.4e-07 57.4 37 73.0
Solyc01g068260.4 Solanum lycopersicum HOM05D001245 ORTHO05D004475 5.4e-07 57.4 37 73.0
Sopen01g030190 Solanum pennellii HOM05D001245 ORTHO05D004475 5.4e-07 57.4 37 73.0
Eucgr.F03841 Eucalyptus grandis HOM05D001245 ORTHO05D004475 7.0e-07 57.0 35 77.1
FvH4_2g27821 Fragaria vesca HOM05D001245 ORTHO05D004475 7.0e-07 57.0 47 63.8
VMungo0647G1057 Vigna mungo HOM05D001245 ORTHO05D004475 7.0e-07 57.0 44 65.9
Duzib116G0160 Durio zibethinus HOM05D001245 ORTHO05D004475 9.2e-07 56.6 41 68.3
Psat6g040520 Pisum sativum HOM05D001245 ORTHO05D004475 9.2e-07 56.6 36 77.8
Cc02_g29380 Coffea canephora HOM05D001245 ORTHO05D004475 1.2e-06 56.2 50 60.0
Lj1g0014366 Lotus japonicus HOM05D001245 ORTHO05D004475 1.2e-06 56.2 36 75.0
Medtr1g029630 Medicago truncatula HOM05D001245 ORTHO05D004475 1.2e-06 56.2 36 75.0
Zm00001eb091010 Zea mays HOM05D001245 ORTHO05D004475 1.2e-06 56.2 60 50.0
HPP92_027721 Vanilla planifolia HOM05D001245 ORTHO05D004475 2.7e-06 55.1 36 72.2
SGA_v2.0_scaffold354G49742 Striga asiatica HOM05D001245 ORTHO05D004475 6.0e-06 53.9 35 71.4
unitig_21.g20280 Utricularia gibba HOM05D001245 ORTHO05D004475 6.0e-06 53.9 34 73.5
PGR042G0290 Punica granatum HOM05D001245 ORTHO05D004475 7.8e-06 53.5 35 74.3


User provided reference genes

Program Settings