Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 4.1e-63 244.6 126 100.0
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 4.1e-63 244.6 126 100.0
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 5.4e-63 244.2 126 99.2
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 2.7e-62 241.9 126 99.2
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 1.0e-61 240.0 126 98.4
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 1.8e-58 229.2 129 95.3
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 2.0e-57 225.7 126 95.2
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 6.4e-56 220.7 126 93.7
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 1.2e-54 216.5 126 89.7
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 3.5e-54 214.9 126 88.9
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 1.2e-49 199.9 123 86.2
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 9.8e-49 196.8 127 85.0
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 1.3e-48 196.4 126 84.1
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 7.0e-47 190.7 126 81.7
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 1.2e-46 189.9 125 82.4
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 1.2e-46 189.9 125 82.4
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 2.0e-46 189.1 122 79.5
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 9.8e-41 170.2 119 79.0
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 9.5e-36 153.7 119 68.9
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 6.8e-34 147.5 123 63.4
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 3.4e-33 145.2 123 62.6
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 5.8e-33 144.4 124 62.9
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 5.8e-33 144.4 123 62.6
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 1.4e-31 139.8 123 61.0
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 2.4e-31 139.0 120 62.5
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 5.4e-31 137.9 120 61.7
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 7.1e-31 137.5 120 61.7
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 1.6e-30 136.3 116 62.9
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 2.7e-30 135.6 123 59.3
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 3.5e-30 135.2 120 60.8
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 3.5e-30 135.2 120 60.8
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 4.6e-30 134.8 120 60.0
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 4.6e-30 134.8 122 59.8
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 1.0e-29 133.7 125 58.4
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 1.3e-29 133.3 123 59.3
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 1.1e-28 130.2 116 62.1
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 1.9e-28 129.4 120 58.3
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.5e-28 129.0 120 58.3
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 2.5e-28 129.0 120 58.3
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 4.3e-28 128.3 121 58.7
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 4.3e-28 128.3 120 58.3
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 7.3e-28 127.5 120 57.5
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 1.2e-27 126.7 120 57.5
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 2.1e-27 125.9 118 57.6
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 2.8e-27 125.6 116 57.8
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 2.8e-27 125.6 116 58.6
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 2.8e-27 125.6 120 56.7
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.6e-27 125.2 123 55.3
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 4.7e-27 124.8 117 60.7
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 6.2e-27 124.4 120 55.8
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 1.4e-26 123.2 119 53.8
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 2.4e-26 122.5 119 55.5
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 3.1e-26 122.1 120 57.5
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 3.1e-26 122.1 121 55.4
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 4.0e-26 121.7 122 53.3
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 5.2e-26 121.3 115 53.9
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 6.8e-26 120.9 127 54.3
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 6.8e-26 120.9 127 54.3
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 6.8e-26 120.9 125 55.2
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 8.9e-26 120.6 120 55.0
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 1.2e-25 120.2 119 53.8
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 1.2e-25 120.2 115 56.5
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.5e-25 119.8 122 51.6
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 1.5e-25 119.8 118 51.7
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 2.0e-25 119.4 126 55.6
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 2.0e-25 119.4 117 56.4
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 2.6e-25 119.0 118 51.7
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 4.4e-25 118.2 119 53.8
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 5.8e-25 117.9 118 54.2
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 5.8e-25 117.9 118 51.7
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 7.6e-25 117.5 116 56.0
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 9.9e-25 117.1 119 53.8
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 9.9e-25 117.1 116 52.6
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 2.2e-24 115.9 116 50.9
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 2.9e-24 115.5 123 52.8
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 3.8e-24 115.2 120 54.2
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 3.8e-24 115.2 115 53.0
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 4.9e-24 114.8 108 58.3
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 6.4e-24 114.4 119 52.9
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 6.4e-24 114.4 122 53.3
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 6.4e-24 114.4 116 52.6
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 8.4e-24 114.0 122 53.3
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 8.4e-24 114.0 115 55.7
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 1.4e-23 113.2 118 55.1
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 1.9e-23 112.8 75 81.3
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 2.4e-23 112.5 118 53.4
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 3.2e-23 112.1 123 53.7
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 4.2e-23 111.7 114 53.5
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 4.2e-23 111.7 116 50.0
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 5.4e-23 111.3 116 52.6
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 5.4e-23 111.3 114 54.4
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 7.1e-23 110.9 118 53.4
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 9.3e-23 110.5 119 47.9
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.2e-22 110.2 122 51.6
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 1.2e-22 110.2 118 52.5
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 2.7e-22 109.0 118 50.0
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.5e-22 108.6 116 49.1
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 1.0e-21 107.1 123 51.2
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 1.7e-21 106.3 117 51.3
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.0e-21 105.5 116 48.3
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 3.0e-21 105.5 118 48.3
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 3.9e-21 105.1 123 51.2
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 5.1e-21 104.8 116 47.4
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 6.6e-21 104.4 116 48.3
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 8.7e-21 104.0 115 49.6
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 1.9e-20 102.8 109 48.6
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 3.3e-20 102.1 115 48.7
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 3.3e-20 102.1 118 47.5
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 4.3e-20 101.7 116 45.7
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 9.6e-20 100.5 120 47.5
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 9.6e-20 100.5 109 51.4
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 9.6e-20 100.5 115 48.7
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 1.6e-19 99.8 115 47.0
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 4.8e-19 98.2 103 52.4
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 1.8e-18 96.3 118 47.5
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 2.4e-18 95.9 102 51.0
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 2.4e-18 95.9 118 46.6
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 3.1e-18 95.5 120 46.7
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 3.1e-18 95.5 119 45.4
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 4.0e-18 95.1 119 42.0
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 2.6e-17 92.4 108 48.1
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 9.9e-17 90.5 108 45.4
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 2.9e-16 89.0 108 45.4
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 6.4e-16 87.8 119 43.7
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 1.0e-13 80.5 115 40.9
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 3.6e-11 72.0 62 62.9
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 8.1e-11 70.9 62 59.7


User provided reference genes

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