Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 1.4e-78 296.2 149 100.0
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 5.2e-73 277.7 149 94.6
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 7.2e-67 257.3 149 88.6
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 5.1e-20 101.7 69 79.7
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 5.1e-20 101.7 69 79.7
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 8.7e-20 100.9 69 79.7
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 8.7e-20 100.9 69 79.7
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 8.7e-20 100.9 69 79.7
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 3.3e-19 99.0 69 78.3
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 3.3e-19 99.0 68 79.4
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 3.3e-19 99.0 68 79.4
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 3.3e-19 99.0 68 79.4
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 3.3e-19 99.0 68 79.4
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 3.3e-19 99.0 68 79.4
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 4.3e-19 98.6 69 76.8
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 4.3e-19 98.6 69 78.3
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 7.3e-19 97.8 69 76.8
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 7.3e-19 97.8 69 78.3
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 9.6e-19 97.4 69 75.4
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 8.1e-18 94.4 71 70.4
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 1.8e-17 93.2 69 73.9
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 6.9e-17 91.3 71 69.0
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 1.2e-16 90.5 71 63.4
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 1.2e-16 90.5 71 69.0
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.2e-16 90.5 71 69.0
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.2e-16 90.5 71 69.0
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 1.2e-16 90.5 71 69.0
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 1.2e-16 90.5 71 70.4
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 2.0e-16 89.7 71 67.6
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 3.4e-16 89.0 71 66.2
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 3.4e-16 89.0 69 66.7
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 4.5e-16 88.6 79 62.0
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 4.5e-16 88.6 71 66.2
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 4.5e-16 88.6 71 69.0
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 5.8e-16 88.2 71 66.2
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 5.8e-16 88.2 71 69.0
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 7.6e-16 87.8 65 72.3
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 9.9e-16 87.4 71 66.2
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 9.9e-16 87.4 71 66.2
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 9.9e-16 87.4 72 66.7
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 9.9e-16 87.4 69 66.7
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 9.9e-16 87.4 77 61.0
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 9.9e-16 87.4 71 67.6
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 9.9e-16 87.4 69 66.7
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 1.3e-15 87.0 71 66.2
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 1.3e-15 87.0 69 66.7
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 2.2e-15 86.3 71 64.8
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 3.8e-15 85.5 71 64.8
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 3.8e-15 85.5 71 63.4
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 3.8e-15 85.5 71 64.8
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 3.8e-15 85.5 71 63.4
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 3.8e-15 85.5 71 66.2
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 4.9e-15 85.1 71 64.8
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 4.9e-15 85.1 72 63.9
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 4.9e-15 85.1 72 63.9
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 4.9e-15 85.1 72 62.5
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 6.4e-15 84.7 71 64.8
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 6.4e-15 84.7 71 64.8
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 6.4e-15 84.7 71 63.4
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 6.4e-15 84.7 71 63.4
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 8.4e-15 84.3 76 60.5
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 8.4e-15 84.3 101 50.5
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 8.4e-15 84.3 100 57.0
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 8.4e-15 84.3 71 62.0
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 1.1e-14 84.0 71 63.4
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.4e-14 83.6 71 60.6
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 1.4e-14 83.6 69 62.3
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 1.4e-14 83.6 69 63.8
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 1.4e-14 83.6 71 62.0
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 2.4e-14 82.8 69 65.2
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 2.4e-14 82.8 116 48.3
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 2.4e-14 82.8 69 63.8
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 3.2e-14 82.4 71 63.4
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 3.2e-14 82.4 69 66.7
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 5.4e-14 81.6 46 84.8
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 7.1e-14 81.3 65 67.7
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 7.1e-14 81.3 118 48.3
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 9.3e-14 80.9 69 65.2
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 1.2e-13 80.5 101 48.5
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 1.2e-13 80.5 70 62.9
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 1.6e-13 80.1 71 62.0
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 1.6e-13 80.1 72 59.7
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 2.1e-13 79.7 42 90.5
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 2.1e-13 79.7 101 46.5
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 3.5e-13 79.0 69 60.9
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 3.5e-13 79.0 115 47.8
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 3.5e-13 79.0 70 67.1
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 4.6e-13 78.6 120 42.5
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 7.9e-13 77.8 71 56.3
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 1.0e-12 77.4 69 60.9
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 1.8e-12 76.6 41 82.9
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 2.3e-12 76.3 69 58.0
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 3.9e-12 75.5 69 56.5
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 8.7e-12 74.3 69 56.5
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 8.7e-12 74.3 69 55.1
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 1.1e-11 73.9 69 59.4
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 1.1e-11 73.9 69 59.4
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 1.9e-11 73.2 111 41.4
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 4.3e-11 72.0 56 71.4
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 2.1e-10 69.7 69 55.1
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 6.9e-09 64.7 68 50.0
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 1.2e-08 63.9 77 46.8
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 2.0e-08 63.2 58 62.1
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 9.9e-08 60.8 41 61.0
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 2.2e-07 59.7 67 46.3
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 3.8e-07 58.9 95 40.0
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 6.4e-07 58.2 60 55.0
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 6.4e-07 58.2 38 71.1
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 8.4e-07 57.8 62 56.5
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 2.4e-06 56.2 60 51.7
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 7.1e-06 54.7 54 57.4


User provided reference genes

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