Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 4.1e-72 274.6 140 100.0
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 1.0e-70 270.0 140 98.6
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 2.9e-65 251.9 147 89.8
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 1.0e-54 216.9 160 75.6
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 5.8e-50 201.1 155 69.7
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 6.4e-49 197.6 157 68.2
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 5.4e-48 194.5 155 68.4
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 2.1e-47 192.6 158 65.2
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 2.1e-47 192.6 158 65.2
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 4.6e-47 191.4 157 66.9
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 6.0e-47 191.0 155 65.8
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 1.0e-46 190.3 160 64.4
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 1.7e-46 189.5 160 63.8
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 1.7e-46 189.5 157 65.6
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 5.1e-46 188.0 155 67.1
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 9.6e-45 183.7 145 71.0
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 2.6e-42 175.6 153 60.8
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 2.3e-38 162.5 154 55.8
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 6.6e-38 161.0 152 57.2
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 4.0e-35 151.8 152 54.6
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 9.0e-35 150.6 155 53.5
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 9.0e-35 150.6 148 55.4
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 7.6e-34 147.5 152 53.3
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 7.6e-34 147.5 150 56.0
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 7.6e-34 147.5 152 53.3
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 9.9e-34 147.1 152 51.3
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 2.9e-33 145.6 159 53.5
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 3.8e-33 145.2 152 53.3
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 3.8e-33 145.2 156 54.5
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 1.1e-32 143.7 155 52.9
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.4e-32 143.3 134 53.0
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 2.4e-32 142.5 137 55.5
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 2.4e-32 142.5 155 52.3
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 2.4e-32 142.5 154 51.3
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 3.2e-32 142.1 154 50.6
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 4.2e-32 141.7 158 53.2
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 4.2e-32 141.7 155 49.7
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 9.3e-32 140.6 146 56.2
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 2.7e-31 139.0 131 58.0
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 3.5e-31 138.7 139 53.2
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 6.0e-31 137.9 147 50.3
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 7.9e-31 137.5 147 49.7
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 1.0e-30 137.1 154 48.1
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 1.8e-30 136.3 133 53.4
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 3.0e-30 135.6 151 51.7
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 3.0e-30 135.6 151 51.7
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 3.9e-30 135.2 156 51.3
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 6.7e-30 134.4 153 50.3
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 6.7e-30 134.4 128 53.9
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 8.7e-30 134.0 152 47.4
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 1.1e-29 133.7 156 48.7
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 1.1e-29 133.7 137 51.8
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 1.5e-29 133.3 150 48.7
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 1.9e-29 132.9 155 49.7
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 1.9e-29 132.9 151 50.3
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 1.9e-29 132.9 150 50.7
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 2.5e-29 132.5 157 48.4
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 2.5e-29 132.5 150 50.7
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 3.3e-29 132.1 152 46.7
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 3.3e-29 132.1 152 48.0
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 4.3e-29 131.7 123 56.9
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 4.3e-29 131.7 153 47.7
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 7.4e-29 131.0 150 48.0
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 7.4e-29 131.0 125 54.4
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 7.4e-29 131.0 128 56.2
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 7.4e-29 131.0 148 47.3
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 9.6e-29 130.6 126 54.8
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 1.3e-28 130.2 129 55.0
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 2.1e-28 129.4 149 48.3
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 2.8e-28 129.0 127 55.1
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 3.6e-28 128.6 123 54.5
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 4.8e-28 128.3 152 46.1
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 4.8e-28 128.3 124 52.4
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 8.1e-28 127.5 125 55.2
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.1e-27 127.1 129 51.9
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 1.1e-27 127.1 151 48.3
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 1.4e-27 126.7 154 45.5
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 1.4e-27 126.7 152 45.4
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 1.8e-27 126.3 151 47.0
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 1.8e-27 126.3 150 48.7
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 2.4e-27 125.9 132 52.3
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 2.4e-27 125.9 141 48.2
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 3.1e-27 125.6 122 54.1
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 3.1e-27 125.6 126 53.2
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 6.9e-27 124.4 123 52.0
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 9.0e-27 124.0 123 52.8
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 9.0e-27 124.0 146 47.3
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 1.2e-26 123.6 150 46.0
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 1.5e-26 123.2 122 54.1
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 1.5e-26 123.2 151 48.3
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 2.0e-26 122.9 150 45.3
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 2.0e-26 122.9 147 45.6
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 2.0e-26 122.9 122 53.3
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 2.6e-26 122.5 157 42.7
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 2.6e-26 122.5 156 43.6
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 4.5e-26 121.7 125 52.8
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 1.7e-25 119.8 129 45.7
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 2.9e-25 119.0 126 51.6
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 4.9e-25 118.2 156 45.5
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 4.9e-25 118.2 122 49.2
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 6.4e-25 117.9 112 51.8
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 6.4e-25 117.9 125 47.2
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 8.4e-25 117.5 117 53.0
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 9.3e-24 114.0 123 48.0
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 1.2e-23 113.6 139 44.6
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 7.9e-23 110.9 139 47.5
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 7.9e-23 110.9 133 50.4
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 1.3e-22 110.2 103 60.2
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 3.0e-22 109.0 128 47.7
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 3.0e-22 109.0 143 43.4
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 1.6e-20 103.2 114 47.4
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 2.0e-18 96.3 116 42.2
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 2.9e-17 92.4 114 43.9
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 8.7e-14 80.9 116 41.4
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 1.9e-13 79.7 92 47.8
BcaC08g47102 Brassica carinata HOM05D006402 ORTHO05D008099 1.6e-12 76.6 50 76.0
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 1.6e-12 76.6 106 38.7
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 1.6e-12 76.6 123 36.6
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 9.0e-11 70.9 64 45.3
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 2.6e-10 69.3 62 45.2
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 2.2e-09 66.2 94 38.3
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 1.9e-08 63.2 50 58.0
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 4.6e-07 58.5 93 37.6


User provided reference genes

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